SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09179
Pre Gene Modal
BGIBMGA003363
Annotation
hypothetical_protein_KGM_20869_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 4.883
 

Sequence

CDS
ATGAATCAGTATCACACGGAACGACGCTTGTGCATTTGTTACAGCTTACTTGCCGGCCTCCTCACGATATCAATAGTATGCATTGCAATTCCGTATAATCACTGGCGTGTGTCTTTGGATATGTGTCCTGGGAATTTCTTGGAGAACATTAGTTGTGGTTGTATATTGAATGGGGTCTTTACATCCCAATCCTTCAATGGAGGACACAACTCATACTGTTTATACGCTATATTCGCTCCTATTCCTGTTATAGTTTATGCCATTGTAATGGCATTATTTCATATGTACAGAGTGTGCATAAATAATATTGGTAAATATGAAGATGAAAAAACAACAGAAATGGAGGAAATCGAAGGAAGATCCATTGTAGTCACATCAAGATCTCAAGTAACAGATTCAAATGACTCTGTCATCTATTGCTGGATACCAACATCATGTCTGGCTGCCGTTCTCTGTCTATACAACTTAGTGCATGCTATAATTACAACAGATGGATATTTTAGAACATGCACACAGTACAGAGGTGCATTAGTCAGGGATCTAAGACAGAGTGGATCTTCAGCAATAGCTATACATTTTCGTCTCAATTGCCAAGCCATTTTTGACTTTATGGATTACGTACATAATGACTCCCAAAATAGTCGCAGAGGAGATTACATAAATACAGGGGCATCGTTACAACTGGCTCTATTCGCAACTTGGGCATCTGTTGTTTTATGGATAGTAATTGTTGTTTTCACTGCTCTCAGAGCTTACAGAGAGAGGCATGTGTTAACATGTTGCGGCAATTAG
Protein
MNQYHTERRLCICYSLLAGLLTISIVCIAIPYNHWRVSLDMCPGNFLENISCGCILNGVFTSQSFNGGHNSYCLYAIFAPIPVIVYAIVMALFHMYRVCINNIGKYEDEKTTEMEEIEGRSIVVTSRSQVTDSNDSVIYCWIPTSCLAAVLCLYNLVHAIITTDGYFRTCTQYRGALVRDLRQSGSSAIAIHFRLNCQAIFDFMDYVHNDSQNSRRGDYINTGASLQLALFATWASVVLWIVIVVFTALRAYRERHVLTCCGN

Summary

EMBL
BABH01023728    ODYU01008651    SOQ52421.1    KQ460615    KPJ13775.1    AGBW02011215    + More
OWR47020.1    NWSH01008300    PCG62610.1    JTDY01001255    KOB74390.1    GFDL01008606    JAV26439.1    DS232103    EDS34894.1    GFDF01003873    JAV10211.1    GFDF01003872    JAV10212.1    GAKP01010485    GAKP01010484    GAKP01010483    JAC48469.1    GAMC01011697    JAB94858.1    GBXI01015129    GBXI01010489    GBXI01003487    JAC99162.1    JAD03803.1    JAD10805.1    GDHF01025708    GDHF01013342    GDHF01010937    GDHF01007597    JAI26606.1    JAI38972.1    JAI41377.1    JAI44717.1    AJWK01026308    AJWK01026309    AJWK01026310    UFQT01000046    SSX18897.1    GL446390    EFN87866.1    GEZM01003696    JAV96626.1    NNAY01000483    OXU28066.1    CH933806    EDW14813.1    KRG01212.1    KRG01213.1    KRG01214.1    JRES01001133    KNC25259.1    CH477229    EAT46993.1    EAT46994.1    CH940652    EDW58943.1    KRF78615.1    JXUM01118038    KQ566144    KXJ70371.1    GAPW01003576    JAC10022.1    AAAB01008980    EAA14524.3    APCN01005233    APCN01005234    CVRI01000074    CRL08159.1    CM000160    EDW98300.1    KRK04196.1    AE014297    AY070964    AAF56895.1    AAL48586.1    GL437344    EFN70593.1    KK852695    KDR18288.1    KQ414613    KOC68933.1    CM000364    EDX14848.1    NEVH01024980    PNF16218.1    CP012526    ALC46177.1    ATLV01022925    KE525338    KFB48127.1    KRF78616.1    KQ976444    KYM86217.1    PYGN01000328    PSN48424.1    CH480819    EDW53357.1    GGFK01010173    MBW43494.1    CH954182    EDV53223.1    CH964232    EDW81139.1    LJIG01009067    KRT83822.1    CH479186    EDW39086.1    CM000070    EAL26880.1    KRS99649.1    KRS99650.1    KRS99651.1    GL771866    EFZ09168.1    OUUW01000007    SPP82864.1    KK107161    QOIP01000003    EZA56608.1    RLU24476.1    GGFL01014786    MBW78964.1    GGFJ01008637    MBW57778.1    CH902623    EDV30532.2    GGFM01006113    MBW26864.1    KQ981276    KYN43552.1    GL888067    EGI68290.1    GGFK01010091    MBW43412.1    EZ423842    ADD20118.1    KQ435824    KOX72211.1    CH916369    EDV92685.1    JXJN01008591    GGFJ01008730    MBW57871.1    KB632330    ERL92587.1    APGK01055687    KB741269    ENN71440.1    GAMD01000335    JAB01256.1    KQ971321    EEZ99475.1    KZ288269    PBC30029.1    GECU01026568    GECU01026336    JAS81138.1    JAS81370.1    GEDC01027063    GEDC01024879    GEDC01022735    GEDC01022717    GEDC01013608    GEDC01007257    GEDC01004153    GEDC01000742    JAS10235.1    JAS12419.1    JAS14563.1    JAS14581.1    JAS23690.1    JAS30041.1    JAS33145.1    JAS36556.1    GEBQ01022990    GEBQ01017885    JAT16987.1    JAT22092.1    GECZ01020704    JAS49065.1    GFTR01003875    JAW12551.1    GBRD01017299    JAG48528.1   

Ontologies

Topology

Length:
263
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.90811
Exp number, first 60 AAs:
22.1191
Total prob of N-in:
0.99829
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  35
outside
36  -  73
TMhelix
74  -  96
inside
97  -  136
TMhelix
137  -  159
outside
160  -  226
TMhelix
227  -  249
inside
250  -  263
 
 

Population Genetic Test Statistics

Pi
246.906427
Theta
224.270824
Tajima's D
0.926071
CLR
2.028329
CSRT
0.635368231588421
Interpretation
Uncertain
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