Gene

KWMTBOMO09176

Pre Gene Modal

BGIBMGA003387

Annotation

C-type_lectin_17_[Bombyx_mori]

Location

Bomo_Chr15(+):12653416-12656817      View in EpiBrowser

Full name

ATP-dependent DNA helicase      

Location in the cell

Extracellular   Reliability : 1.362 Mitochondrial   Reliability : 1.218 Nuclear   Reliability : 1.415

CDS

ATGCAAGACACCATTTTGAATTTACTTTGGGAGAGAAATGAGCCGAGACCCAACGGTGGTCGATGTTTAGCAATGCAACGGAGCGGTCGCTTTTTCGTGAACCCATGTACACAGCCATTACCGTTCATCTGCAAGACAAAAGCGGAAAAAATAACTTATAATAAAGAATGCAAATCGTTCGATAAACGATGGAAACTGGGCTCGAAAAATATTTGTTTCTATATGCATACGGAACCGCAAACATGGTATCAAGCCTACATGACATGTTTGGCTTCTGGTGGACATCTGCTTATAGTTAACGATCGCAATGAAGCCAAATATGTGAGGGATTTGTTTAAAGAAACGCCTGAAAGGAGAGTTCCGGATAACGAGTTTGCTTTTTTGGGCTTCAGCGACCTATTTCAAAGGCACAATTTTAAAACCATACATGATCAGAAAATCGAAGACGTAGGCTACTCCGATTGGGATGTCAAGTGCTCCCAAAACGAGAAATCCGTACCCCAACGCTGCGGTGGTGTTCGACGAAATGGTCTTCTGACCACCGGTGACTGTAACGTGCCGGCCATGTTTTTTTGCGAAAAACCCCTCAATGCAACGGTCTCCAAGCAGGCGTTACGACAAAGAGTAAAAAAGGCGAAGCCTGCACTGCAGAGTCAAGCACAAATGATTTCTGCAGACGGTCTGTTTGAAGATATTCTATAA

Protein

MQDTILNLLWERNEPRPNGGRCLAMQRSGRFFVNPCTQPLPFICKTKAEKITYNKECKSFDKRWKLGSKNICFYMHTEPQTWYQAYMTCLASGGHLLIVNDRNEAKYVRDLFKETPERRVPDNEFAFLGFSDLFQRHNFKTIHDQKIEDVGYSDWDVKCSQNEKSVPQRCGGVRRNGLLTTGDCNVPAMFFCEKPLNATVSKQALRQRVKKAKPALQSQAQMISADGLFEDIL

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.
Belongs to the helicase family.

Uniprot

B3IYT1   H9J1K0   A0A194PJK9   A0A212F8B1   A0A194RCY4   B3IYT2   + More
A0A212F5D8   A0A194PUI0   A0A194RL20   A0A219YXH1   A0A0L7LRB5   A0A219YXH0   A0A219YXH5   A0A2W1BTF0   O97363   B7SVM1   A0A219YXG6   A0A219YXI5   A0A173M1W5   H9IYF5   A0A219YXH6   A0A2W1BVD9   D2X2F6   A0A2A4J280   A0A2A4J242   A0A2A4J3T7   A0A219YXK5   H9IYF4   A0A2W1BZP3   Q5UAW7   I1VR05   A0A194QAQ3   A0A219YXH2   A0A437AW60   A0A2H1WK53   A0A437B5N6   A0A2W1BYL2   A0A2A4IYF0   Q19AB1   A0A219YXG9   A0A219YXH4   A0A3G1HH34   A0A0N1IPT5   A0A2W1BVG4   A0A219YXI6   A0A3S2NEY7   A0A219YXH7   A0A3G1HH43   Q9NBV9   A0A219YXI3   C0L7M1   A0A3G1HH42   A0A219YXH3   C0L7M0   A0A1E1WP12   A0A219YXI8   A0A2A4J4S6   A0A219YXG8   S4PJZ4   A0A219YXI1   A0A2A4IWU7   A0A2W1BF95   A0A437ARZ3   G5CJE6   A0A3S2L865   A0A0D3M5W6   A0A437AW55   B1A5Z5   I1VR07   A0A219YXL1   Q5MGF0   A0A219YXG7   O96359   A0A2A4J3K2   R9UPV0   A0A0N1PJ18   A0A1E1W152   A0A219YXH8   I1VR03   A0A437AW81   A0A194QAQ8   A0A096ZGV0   A0A3S2TGZ3   Q5MGG4   A0A1E1WQ86   A0A1C9EGM6   A0A437AS17   A0A212FF49   A0A2W1C0J5   A0A2A4K0G1   A0A212EQ02   A0A3G1HH41   A0A3G1HH66   A0A1E1WV48   Q5UAW8   A0A0L7LUC3   A0A2W1B7N9  

EC Number

3.6.4.12

Pubmed

19121390    26354079    22118469    26227816    28756777    9310381    + More
9989592    19033442    16640722    22516747    17568670    10954704    23622113    16023793    9818384    15763465   

EMBL

AB444137    BAG54784.1    BABH01023721    KQ459602    KPI93512.1    AGBW02009767    + More
OWR49970.1    KQ460615    KPJ13771.1    AB444138    BAG54785.1    AGBW02010215    OWR48919.1    KQ459597    KPI94795.1    KQ460207    KPJ16676.1    KX550126    AQY54443.1    JTDY01000269    KOB77990.1    KX550127    AQY54444.1    KX550131    AQY54448.1    KZ149905    PZC78329.1    AJ011573    CAB38429.1    EU770390    ACI32834.1    KX550121    AQY54438.1    KX550141    AQY54458.1    LC150882    BAV01248.1    BABH01020450    KX550132    AQY54449.1    KZ149926    PZC77594.1    GQ487489    ADB12587.1    NWSH01003559    PCG66111.1    NWSH01003594    PCG66071.1    PCG66072.1    KX550129    AQY54446.1    BABH01020449    PZC78330.1    AY768812    AAV41237.2    JQ269656    AFI47451.1    KQ459232    KPJ02552.1    KX550125    AQY54442.1    RSAL01000341    RVE42392.1    ODYU01009180    SOQ53429.1    RSAL01000150    RVE45768.1    PZC78327.1    NWSH01005098    PCG64438.1    DQ533877    ABF83203.1    KX550120    AQY54437.1    KX550130    AQY54447.1    KY111304    KY111307    AQX37240.1    AQX37243.1    KQ460044    KPJ18317.1    PZC78331.1    KX550135    AQY54452.1    RVE45766.1    KX550133    AQY54450.1    KY111309    AQX37245.1    AF242202    AAF91316.2    KX550134    AQY54451.1    FJ666211    ACN41859.1    KY111310    AQX37246.1    KX550128    AQY54445.1    FJ666210    ACN41858.1    GDQN01002397    JAT88657.1    KX550142    AQY54459.1    NWSH01002983    PCG67147.1    KX550122    AQY54439.1    GAIX01004755    JAA87805.1    KX550136    AQY54453.1    PCG64437.1    KZ150306    PZC71506.1    RSAL01001432    RVE40791.1    JN133501    AEO52696.1    RSAL01000824    RVE41129.1    KF285999    AIC33761.1    RVE42394.1    EU426550    ABZ81710.1    JQ269658    AFI47453.1    KX550139    AQY54456.1    AY829836    AAV91450.1    KX550123    AQY54440.1    AF023275    AAD09286.1    NWSH01003225    PCG66727.1    KC733761    AGN70857.1    KPJ18324.1    GDQN01010324    JAT80730.1    KX550124    AQY54441.1    JQ269654    AFI47449.1    RVE42393.1    KPJ02557.1    KF752419    AIR95998.1    RVE45770.1    AY829822    AAV91436.1    GDQN01002063    JAT88991.1    KX778610    AON96650.1    RVE40790.1    AGBW02008849    OWR52366.1    PZC77593.1    NWSH01000351    PCG77132.1    AGBW02013342    OWR43573.1    KY111311    AQX37247.1    KY111312    AQX37248.1    GDQN01000383    JAT90671.1    AY768811    AAV41236.1    JTDY01000107    KOB78821.1    PZC71508.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000037510    UP000218220    + More
UP000283053   

PRIDE

B3IYT1    H9J1K0    B3IYT2    O97363    H9IYF5    D2X2F6    + More
H9IYF4   

Pfam

PF00059   Lectin_C        + More
PF00153   Mito_carr
PF00293   NUDIX
PF05970   PIF1

Interpro

IPR016187   CTDL_fold        + More
IPR001304   C-type_lectin-like       
IPR016186   C-type_lectin-like/link_sf       
IPR023395   Mt_carrier_dom_sf       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR018378   C-type_lectin_CS       
IPR036179   Ig-like_dom_sf       
IPR013783   Ig-like_fold       
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR003563   OxG-triPHTase       
IPR000086   NUDIX_hydrolase_dom       
IPR010285   DNA_helicase_pif1-like       
IPR027417   P-loop_NTPase       

SUPFAM

SSF56436   SSF56436        + More
SSF103506   SSF103506       
SSF48726   SSF48726       
SSF55811   SSF55811       
SSF52540   SSF52540       

Gene 3D

3.10.100.10     1.50.40.10     2.60.40.10    

ProteinModelPortal

B3IYT1   H9J1K0   A0A194PJK9   A0A212F8B1   A0A194RCY4   B3IYT2   + More
A0A212F5D8   A0A194PUI0   A0A194RL20   A0A219YXH1   A0A0L7LRB5   A0A219YXH0   A0A219YXH5   A0A2W1BTF0   O97363   B7SVM1   A0A219YXG6   A0A219YXI5   A0A173M1W5   H9IYF5   A0A219YXH6   A0A2W1BVD9   D2X2F6   A0A2A4J280   A0A2A4J242   A0A2A4J3T7   A0A219YXK5   H9IYF4   A0A2W1BZP3   Q5UAW7   I1VR05   A0A194QAQ3   A0A219YXH2   A0A437AW60   A0A2H1WK53   A0A437B5N6   A0A2W1BYL2   A0A2A4IYF0   Q19AB1   A0A219YXG9   A0A219YXH4   A0A3G1HH34   A0A0N1IPT5   A0A2W1BVG4   A0A219YXI6   A0A3S2NEY7   A0A219YXH7   A0A3G1HH43   Q9NBV9   A0A219YXI3   C0L7M1   A0A3G1HH42   A0A219YXH3   C0L7M0   A0A1E1WP12   A0A219YXI8   A0A2A4J4S6   A0A219YXG8   S4PJZ4   A0A219YXI1   A0A2A4IWU7   A0A2W1BF95   A0A437ARZ3   G5CJE6   A0A3S2L865   A0A0D3M5W6   A0A437AW55   B1A5Z5   I1VR07   A0A219YXL1   Q5MGF0   A0A219YXG7   O96359   A0A2A4J3K2   R9UPV0   A0A0N1PJ18   A0A1E1W152   A0A219YXH8   I1VR03   A0A437AW81   A0A194QAQ8   A0A096ZGV0   A0A3S2TGZ3   Q5MGG4   A0A1E1WQ86   A0A1C9EGM6   A0A437AS17   A0A212FF49   A0A2W1C0J5   A0A2A4K0G1   A0A212EQ02   A0A3G1HH41   A0A3G1HH66   A0A1E1WV48   Q5UAW8   A0A0L7LUC3   A0A2W1B7N9  

PDB

5XTS     E-value=8.20645e-05,     Score=107

KEGG

100174845    no KO assigned | (RefSeq) CTL17, BmCTL17, BmLEL-1, Lel-1; C-type lectin 17

GO

GO:0030246   GO:0016021   GO:0022857   GO:0006281   GO:0008413  

Length:

233

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.23134

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.02631

outside

1  -  233

 

 

Pi

130.206755

Theta

124.776281

Tajima's D

0.536599

CLR

113.252031

CSRT

0.52352382380881

Interpretation

Uncertain