SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09167
Pre Gene Modal
BGIBMGA003369
Annotation
hypothetical_protein_KGM_12483_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.034 Extracellular   Reliability : 1.137 PlasmaMembrane   Reliability : 1.53
 

Sequence

CDS
ATGGCAAAGTTTCTACTGGACGCGGGTGCGGATTACCACGAGCGTTGCTACGGGAACTTCATGTGTCCTGAGGATCAAAAGGCTTCCAGGACGGACTCTTTCGATCACGAATGGGTCAACGTCCAGCCTGACACTAATTATAATGGGTACGTCTACTGGGGCGAGTACCCGTTGAGTTTCGCAGCATGCTTAGGCCAGGAGGAGTGCTACCGTTTGATCTTAGCACGAGGAGCGGATCCTGATAAGCAGGATACTAATGGCAATACAGTTCTGCACATGCTAGTCATATACGAGAAGATGAGCACATTCGATATGGCTTACGAAGTGGGCGCGTCCCTAAACATTCGTAACGTACAAAACCTAACTCCCCTAACCCTTGCCGCCAAGCTAGCTCGCACCGAGATGTTCTTTCACATTCTAAACATCGAAAGGGAGATTTACTGGCAGATCGGCGCCACCACATGCGCCGCCTACCCTTTAGGACAAGTTGATACAATAGACACTGAAACAGGACTAATTAGTAAGGATTCAGCTCTGAATTTGGTTGTTTTTGGGGTAAGTTTATTAATCTTTAATGTATGA
Protein
MAKFLLDAGADYHERCYGNFMCPEDQKASRTDSFDHEWVNVQPDTNYNGYVYWGEYPLSFAACLGQEECYRLILARGADPDKQDTNGNTVLHMLVIYEKMSTFDMAYEVGASLNIRNVQNLTPLTLAAKLARTEMFFHILNIEREIYWQIGATTCAAYPLGQVDTIDTETGLISKDSALNLVVFGVSLLIFNV

Summary

Similarity
Belongs to the transient receptor (TC 1.A.4) family.
EMBL
BABH01023705    ODYU01004578    SOQ44597.1    NWSH01001620    PCG70675.1    RSAL01000185    + More
RVE44812.1    KQ460615    KPJ13765.1    KQ459602    KPI93506.1    KZ288269    PBC29938.1    KQ435824    KOX72182.1    JTDY01010076    KOB61355.1    GL450384    EFN81068.1    KK852473    KDR23153.1    KX249697    AOR81474.1    MF684871    ATU07272.1    KQ434864    KZC09064.1    ADTU01004267    ADTU01004268    GBHO01042579    JAG01025.1    PYGN01002631    PSN30164.1    NEVH01007393    PNF35990.1    QOIP01000003    RLU24512.1    KK107419    EZA51032.1    ABLF02027429    ABLF02027431    ABLF02027434    ABLF02027436    ABLF02044078    KQ761768    OAD57093.1    KQ414613    KOC68960.1    GL440604    EFN65752.1    GL767043    EFZ14282.1    GL887645    EGI70573.1    MF684870    ATU07271.1    CH477208    EAT47802.1    NNAY01000937    OXU25833.1    KQ978543    KYN30196.1    UFQS01000077    UFQT01000077    UFQT01000658    SSW99031.1    SSX19413.1    SSX26217.1    PYGN01002813    PSN29936.1    DS231910    EDS45718.1    KQ982566    KYQ54775.1    GEHC01001268    JAV46377.1    KQ971342    EFA04638.2    AAZO01004148    AAZO01004149    AAZO01004150    DS235363    EEB15225.1    CAQQ02001793    CAQQ02001794    KQ981276    KYN43668.1    KQ977220    KYN04879.1    APGK01003874    APGK01003875    KB735463    KB735462    ENN83360.1    ENN83361.1    KB631628    ERL84850.1    CVRI01000036    CRK93055.1    JXJN01002093    AXCM01002289    CCAG010002044    AXCN02001826    AAAB01008986    EAA00229.4    APCN01003284    ATLV01022313    KE525331    KFB47444.1    ADMH02002188    ETN57908.1    CH933809    EDW19410.1    CH940647    EDW70400.1    CH916366    EDV96601.1    CP012525    ALC44528.1    CH963847    EDW72697.2    KK854252    PTY13745.1    JH430212    CM000159    KRK01859.1    CM002912    KMY99536.1    CH954178    EDV51740.1    CH480815    EDW41454.1    OUUW01000002    SPP76094.1    EDW94483.1    AE014296    AGB94526.1    AY262004    AAF49752.2    AAP57097.1    LRGB01003146    KZS04054.1    JRES01000355    KNC31981.1    CH479188    EDW40540.1    CH379069    EDY73559.2    GDIP01188372    JAJ35030.1    CH902618    KPU77969.1    EDV39237.1    LNIX01000033    OXA40438.1    GDIQ01138587    JAL13139.1   
Pfam
PF00520   Ion_trans        + More
PF12796   Ank_2
PF13606   Ank_3
PF01923   Cob_adeno_trans
Interpro
IPR036770   Ankyrin_rpt-contain_sf        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR005821   Ion_trans_dom       
IPR024862   TRPV       
IPR002110   Ankyrin_rpt       
IPR016030   CblAdoTrfase-like       
IPR036451   CblAdoTrfase-like_sf       
IPR029499   PduO-typ       
SUPFAM
SSF48403   SSF48403        + More
SSF89028   SSF89028       
Gene 3D
PDB
6E2G     E-value=1.06225e-18,     Score=225

Ontologies

Topology

Length:
193
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0963
Exp number, first 60 AAs:
0.00133
Total prob of N-in:
0.02901
outside
1  -  193
 
 

Population Genetic Test Statistics

Pi
206.396313
Theta
192.157015
Tajima's D
0.271468
CLR
0.014664
CSRT
0.450327483625819
Interpretation
Uncertain
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