Gene

KWMTBOMO09166

Pre Gene Modal

BGIBMGA003369

Annotation

PREDICTED:_transient_receptor_potential_cation_channel_subfamily_V_member_5_[Papilio_xuthus]

Location

Bomo_Chr15(-):12541046-12544335      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.164

CDS

ATGACCCCGAACGCAGATTTTGATACGAATGCTGTTGAAGTCCTGAACGGTACTAAGTTCGGCGGTTCTCATTGTGCACGATTCAAAAGTCACCCCAAAGAAAAATCGACTGAAGCACCCAGGGAGAATGACGTTGAAGGTTGGTGGGAAGACTTGACAGAGGAATGCAGGTTGATGAACTTGGACACGTGGCAAGCCAAACTAAGGATATCTGCAGAGCTTCTGTTGTGGATGGGGGCTTTGGCTTATTTCGGAGCTGCGTTACGTGAAGCAAAGTTCCTCGGGATCAAAATGTTTATAGAGAATCTGAGCACTGTGCCATCCAGGGTGATGTTCTTGTTTTCGTGTCTGCTGATGTTGATACTGCCAACTTTGAGGTTATGGTGCGCTGACGAGGCGGAGGACCATCTCGCTGTCATGATCATGCTCACTACTGCTCCTTACTTCTTGTTCTTTTGCAGGGGTTTCAAAACAGTGGGTCCATTCGTGGTCATGATATACCGCATGGTGATGGGTGACCTGCTACGTTTCGTTTGTATATATTTGGTATTCGTTATGGGATTCTCACAAGGTCAGTGA

Protein

MTPNADFDTNAVEVLNGTKFGGSHCARFKSHPKEKSTEAPRENDVEGWWEDLTEECRLMNLDTWQAKLRISAELLLWMGALAYFGAALREAKFLGIKMFIENLSTVPSRVMFLFSCLLMLILPTLRLWCADEAEDHLAVMIMLTTAPYFLFFCRGFKTVGPFVVMIYRMVMGDLLRFVCIYLVFVMGFSQGQ

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

H9J1I2   A0A2H1VUT8   A0A2A4JF08   A0A194R933   A0A437B318   A0A194PJA5   + More
A0A0T6B2S7   E2BT66   A0A3L8DW18   A0A026W4Q4   A0A0J7P0R4   E2ALE7   D6WNB8   A0A0L7RDT5   K7IZV8   A0A232F5T4   A0A087ZYS6   A0A0N0U4I6   E9IYP1   A0A154PCB3   F4W5C3   A0A195FT83   A0A151JS60   A0A158NYU2   A0A1A9WN55   A0A151X2W3   A0A1B0FCJ2   A0A1I8PWX2   A0A195CXK7   A0A1A9UG77   A0A1B0AQW6   A0A1A9YIF1   A0A1A9ZRW3   A0A1W4UI63   A0A195BTK9   A0A0J9RUU4   A0A3B0J3B1   B4LG01   B4HHC9   A0A1I8NF88   M9PI57   Q9VUD5   B4MKJ1   B4PI08   A0A0L0CIB2   B4IYR4   B4KV70   A0A0R1E100   B3ND18   A0A0P8ZTX7   B3M3H6   B4GS05   B5DPQ2   K7IZV9   A0A0A9W831   A0A0A9VZJ0   A0A146LLL1   A0A0A9W835   A0A2S2PDN2   A0A2D3C352   A0A182PBM6   A0A1S4E9G3   B4QJY5   J9JMM2   A0A384T331   A0A2D3C346   A0A084WB50   A0A182TZ57   A0A182KST9   A0A182HPY5   Q7Q036   A0A182UST4   A0A182XDA4   A0A182Y1X3   A0A182QKQ8   A0A182W9A1   A0A182RGL2   A0A182MP05   A0A182JWK6   A0A182JFW2   A0A182NPF8   A0A336K3N0   N6T4S3   A0A182FUF6   Q17M43   A0A1S4EXZ0   A0A1W7R5B7   B0WEK2   N6URE5   U4U4H7   A0A2J7R595   A0A067RJJ5   A0A2P8XDX1   W5J3N0   A0A0M4EB02   A0A0P4XDQ1  

Pubmed

19121390    26354079    20798317    30249741    24508170    18362917    + More
19820115    20075255    28648823    21282665    21719571    21347285    22936249    17994087    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12819662    26109357    26109356    17550304    26108605    15632085    25401762    26823975    24438588    20966253    12364791    14747013    17210077    25244985    23537049    17510324    24845553    29403074    20920257    23761445   

EMBL

BABH01023705    ODYU01004578    SOQ44597.1    NWSH01001620    PCG70675.1    KQ460615    + More
KPJ13765.1    RSAL01000185    RVE44812.1    KQ459602    KPI93506.1    LJIG01016151    KRT81461.1    GL450384    EFN81068.1    QOIP01000003    RLU24512.1    KK107419    EZA51032.1    LBMM01000490    KMQ98230.1    GL440604    EFN65752.1    KQ971342    EFA04638.2    KQ414613    KOC68960.1    NNAY01000937    OXU25833.1    KQ435824    KOX72182.1    GL767043    EFZ14282.1    KQ434864    KZC09064.1    GL887645    EGI70573.1    KQ981276    KYN43668.1    KQ978543    KYN30196.1    ADTU01004267    ADTU01004268    KQ982566    KYQ54775.1    CCAG010002044    KQ977220    KYN04879.1    JXJN01002093    KQ976407    KYM91409.1    CM002912    KMY99536.1    OUUW01000002    SPP76094.1    CH940647    EDW70400.1    CH480815    EDW41454.1    AE014296    AGB94526.1    AY262004    AAF49752.2    AAP57097.1    CH963847    EDW72697.2    CM000159    EDW94483.1    JRES01000355    KNC31981.1    CH916366    EDV96601.1    CH933809    EDW19410.1    KRK01859.1    CH954178    EDV51740.1    CH902618    KPU77969.1    EDV39237.1    CH479188    EDW40540.1    CH379069    EDY73559.2    GBHO01042584    JAG01020.1    GBHO01042580    JAG01024.1    GDHC01009696    JAQ08933.1    GBHO01042579    JAG01025.1    GGMR01014883    MBY27502.1    MF684870    ATU07271.1    CM000363    EDX10423.1    ABLF02027429    ABLF02027431    ABLF02027434    ABLF02027436    ABLF02044078    KX249697    AOR81474.1    MF684871    ATU07272.1    ATLV01022313    KE525331    KFB47444.1    APCN01003284    AAAB01008986    EAA00229.4    AXCN02001826    AXCM01002289    UFQS01000077    UFQT01000077    UFQT01000658    SSW99031.1    SSX19413.1    SSX26217.1    APGK01044147    KB741020    ENN75134.1    CH477208    EAT47802.1    GEHC01001268    JAV46377.1    DS231910    EDS45718.1    APGK01003874    APGK01003875    KB735463    KB735462    ENN83360.1    ENN83361.1    KB631628    ERL84850.1    NEVH01007393    PNF35990.1    KK852473    KDR23153.1    PYGN01002631    PSN30164.1    ADMH02002188    ETN57908.1    CP012525    ALC44528.1    GDIP01245706    JAI77695.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000283053    UP000053268    UP000008237    + More
UP000279307    UP000053097    UP000036403    UP000000311    UP000007266    UP000053825    UP000002358    UP000215335    UP000005203    UP000053105    UP000076502    UP000007755    UP000078541    UP000078492    UP000005205    UP000091820    UP000075809    UP000092444    UP000095300    UP000078542    UP000078200    UP000092460    UP000092443    UP000092445    UP000192221    UP000078540    UP000268350    UP000008792    UP000001292    UP000095301    UP000000803    UP000007798    UP000002282    UP000037069    UP000001070    UP000009192    UP000008711    UP000007801    UP000008744    UP000001819    UP000075885    UP000079169    UP000000304    UP000007819    UP000030765    UP000075902    UP000075882    UP000075840    UP000007062    UP000075903    UP000076407    UP000076408    UP000075886    UP000075920    UP000075900    UP000075883    UP000075881    UP000075880    UP000075884    UP000019118    UP000069272    UP000008820    UP000002320    UP000030742    UP000235965    UP000027135    UP000245037    UP000000673    UP000092553   

PRIDE

H9J1I2    Q9VUD5   

Pfam

PF00520   Ion_trans        + More
PF12796   Ank_2
PF13606   Ank_3
PF01923   Cob_adeno_trans

Interpro

IPR036770   Ankyrin_rpt-contain_sf        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR005821   Ion_trans_dom       
IPR024862   TRPV       
IPR002110   Ankyrin_rpt       
IPR016030   CblAdoTrfase-like       
IPR036451   CblAdoTrfase-like_sf       
IPR029499   PduO-typ       

SUPFAM

SSF48403   SSF48403        + More
SSF89028   SSF89028       

Gene 3D

1.25.40.20     1.20.1200.10    

CDD

cd00204  ANK

ProteinModelPortal

H9J1I2   A0A2H1VUT8   A0A2A4JF08   A0A194R933   A0A437B318   A0A194PJA5   + More
A0A0T6B2S7   E2BT66   A0A3L8DW18   A0A026W4Q4   A0A0J7P0R4   E2ALE7   D6WNB8   A0A0L7RDT5   K7IZV8   A0A232F5T4   A0A087ZYS6   A0A0N0U4I6   E9IYP1   A0A154PCB3   F4W5C3   A0A195FT83   A0A151JS60   A0A158NYU2   A0A1A9WN55   A0A151X2W3   A0A1B0FCJ2   A0A1I8PWX2   A0A195CXK7   A0A1A9UG77   A0A1B0AQW6   A0A1A9YIF1   A0A1A9ZRW3   A0A1W4UI63   A0A195BTK9   A0A0J9RUU4   A0A3B0J3B1   B4LG01   B4HHC9   A0A1I8NF88   M9PI57   Q9VUD5   B4MKJ1   B4PI08   A0A0L0CIB2   B4IYR4   B4KV70   A0A0R1E100   B3ND18   A0A0P8ZTX7   B3M3H6   B4GS05   B5DPQ2   K7IZV9   A0A0A9W831   A0A0A9VZJ0   A0A146LLL1   A0A0A9W835   A0A2S2PDN2   A0A2D3C352   A0A182PBM6   A0A1S4E9G3   B4QJY5   J9JMM2   A0A384T331   A0A2D3C346   A0A084WB50   A0A182TZ57   A0A182KST9   A0A182HPY5   Q7Q036   A0A182UST4   A0A182XDA4   A0A182Y1X3   A0A182QKQ8   A0A182W9A1   A0A182RGL2   A0A182MP05   A0A182JWK6   A0A182JFW2   A0A182NPF8   A0A336K3N0   N6T4S3   A0A182FUF6   Q17M43   A0A1S4EXZ0   A0A1W7R5B7   B0WEK2   N6URE5   U4U4H7   A0A2J7R595   A0A067RJJ5   A0A2P8XDX1   W5J3N0   A0A0M4EB02   A0A0P4XDQ1  

PDB

5IS0     E-value=2.86993e-09,     Score=144

KEGG

101740263    K04974 transient receptor potential cation channel subfamily V member 5 | (RefSeq) transient recepto

GO

GO:0016021   GO:0005216   GO:0006811   GO:0005262   GO:0005887   GO:0007628   GO:0001964   GO:0050976   GO:0048060   GO:0010996   GO:0050884   GO:0009270   GO:0007605   GO:0005261   GO:0006812   GO:0050974   GO:0034703   GO:0006816  

PANTHER

PTHR10582  

Length:

192

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

79.78788

Exp number, first 60 AAs:

0.00033

Total prob of N-in:

0.39706

inside

1  -  65

TMhelix

66  -  88

outside

89  -  107

TMhelix

108  -  130

inside

131  -  136

TMhelix

137  -  156

outside

157  -  165

TMhelix

166  -  188

inside

189  -  192

 

 

Pi

196.133018

Theta

180.680863

Tajima's D

0.286916

CLR

0.321202

CSRT

0.448127593620319

Interpretation

Uncertain