Gene

KWMTBOMO09165

Pre Gene Modal

BGIBMGA003369

Annotation

PREDICTED:_transient_receptor_potential_cation_channel_subfamily_V_member_5_[Papilio_polytes]

Location

Bomo_Chr15(-):12537646-12538925      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.906 PlasmaMembrane   Reliability : 1.585

CDS

ATGTTATACTTTCGCGCCTTTTTGATAATGGCGCTTGTAACAGCATCGAAATTTCGAGAAAACCTGAAATATGAAAATCATTCTAAGAATCCTTTAAATAATGTAAAGAAACATTTGCAGCTCCTCTTCGTGATATATATGATAATAGTAGCGATTCTCCTGGTGAACATGTTGATTGCCATGATGGGGAACACTTACCAGAAGATAGCGGAGACGAGGAACGAATGGCAGCGGCAGTGGGCCCGGATAGTGCTGGTGGTGGAGCGAGGAGTTCCACCGGCGCAGAGATTAAAGCAGCTGATGACGTACAGTCAGCCTATGGCCAATGGAAAGAGAGCTTTAGTCTTGAGAATCAATCAAAAGGACGAAGACAAGGAAGAGATGAAAGAGATTTTGGAAATGAAGAGAACTCACGAGCGCATTGTAGCTAAGAGGAAGCAACGGGAGGCGCTTAAGCCTGGCGAGATCCCGCCACCCGCCAGAGATTATCCTATTAGGAAATGA

Protein

MLYFRAFLIMALVTASKFRENLKYENHSKNPLNNVKKHLQLLFVIYMIIVAILLVNMLIAMMGNTYQKIAETRNEWQRQWARIVLVVERGVPPAQRLKQLMTYSQPMANGKRALVLRINQKDEDKEEMKEILEMKRTHERIVAKRKQREALKPGEIPPPARDYPIRK

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

H9J1I2   A0A194R933   A0A194PJA5   A0A2A4JF08   A0A437B318   A0A2J7R0Q1   + More
A0A0K8TIQ4   A0A2S2N6I9   A0A146LLL1   A0A0A9W831   A0A0A9VZJ0   A0A0A9W835   A0A154PCB3   A0A182Y1X3   A0A2D3C346   A0A384T331   A0A182TZ57   A0A182UST4   A0A182KST9   A0A182XDA4   A0A182HPY5   A0A182JWK6   A0A2S2PDN2   B0WEK2   N6T4S3   A0A1W7R5B7   Q7Q036   A0A182MP05   Q17M43   A0A1S4EXZ0   A0A0L0CIB2   A0A2D3C352   A0A336K3N0   A0A164LF48   A0A1S4E9G3   T1H7L4   A0A226D6F0   A0A0P4XDQ1   A0A1D2MTR1   A0A0L7KE42   A0A2L2YWU7  

Pubmed

19121390    26354079    26823975    25401762    25244985    20966253    + More
23537049    12364791    14747013    17210077    17510324    26108605    27289101    26227816    26561354   

EMBL

BABH01023705    KQ460615    KPJ13765.1    KQ459602    KPI93506.1    NWSH01001620    + More
PCG70675.1    RSAL01000185    RVE44812.1    NEVH01008221    PNF34409.1    GBRD01000530    JAG65291.1    GGMR01000204    MBY12823.1    GDHC01009696    JAQ08933.1    GBHO01042584    JAG01020.1    GBHO01042580    JAG01024.1    GBHO01042579    JAG01025.1    KQ434864    KZC09064.1    MF684871    ATU07272.1    KX249697    AOR81474.1    APCN01003284    GGMR01014883    MBY27502.1    DS231910    EDS45718.1    APGK01044147    KB741020    ENN75134.1    GEHC01001268    JAV46377.1    AAAB01008986    EAA00229.4    AXCM01002289    CH477208    EAT47802.1    JRES01000355    KNC31981.1    MF684870    ATU07271.1    UFQS01000077    UFQT01000077    UFQT01000658    SSW99031.1    SSX19413.1    SSX26217.1    LRGB01003146    KZS04053.1    LNIX01000033    OXA40438.1    GDIP01245706    JAI77695.1    LJIJ01000539    ODM96433.1    JTDY01010076    KOB61355.1    IAAA01067267    LAA11940.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000283053    UP000235965    + More
UP000076502    UP000076408    UP000075902    UP000075903    UP000075882    UP000076407    UP000075840    UP000075881    UP000002320    UP000019118    UP000007062    UP000075883    UP000008820    UP000037069    UP000076858    UP000079169    UP000015102    UP000198287    UP000094527    UP000037510   

PRIDE

H9J1I2   

Pfam

PF00520   Ion_trans        + More
PF12796   Ank_2
PF13606   Ank_3

Interpro

IPR036770   Ankyrin_rpt-contain_sf        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR005821   Ion_trans_dom       
IPR024862   TRPV       
IPR002110   Ankyrin_rpt       

SUPFAM

SSF48403   SSF48403       

Gene 3D

1.25.40.20    

CDD

cd00204  ANK

ProteinModelPortal

H9J1I2   A0A194R933   A0A194PJA5   A0A2A4JF08   A0A437B318   A0A2J7R0Q1   + More
A0A0K8TIQ4   A0A2S2N6I9   A0A146LLL1   A0A0A9W831   A0A0A9VZJ0   A0A0A9W835   A0A154PCB3   A0A182Y1X3   A0A2D3C346   A0A384T331   A0A182TZ57   A0A182UST4   A0A182KST9   A0A182XDA4   A0A182HPY5   A0A182JWK6   A0A2S2PDN2   B0WEK2   N6T4S3   A0A1W7R5B7   Q7Q036   A0A182MP05   Q17M43   A0A1S4EXZ0   A0A0L0CIB2   A0A2D3C352   A0A336K3N0   A0A164LF48   A0A1S4E9G3   T1H7L4   A0A226D6F0   A0A0P4XDQ1   A0A1D2MTR1   A0A0L7KE42   A0A2L2YWU7  

PDB

6C8H     E-value=2.02651e-07,     Score=127

KEGG

101740263    K04974 transient receptor potential cation channel subfamily V member 5 | (RefSeq) transient recepto

GO

GO:0016021   GO:0005216   GO:0005887   GO:0005262   GO:0006811   GO:0016020   GO:0015074   GO:0005739   GO:0016776   GO:0016876   GO:0043039   GO:0055085  

PANTHER

PTHR10582  

Length:

167

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.41682

Exp number, first 60 AAs:

20.87768

Total prob of N-in:

0.25743

POSSIBLE N-term signal

sequence

outside

1  -  37

TMhelix

38  -  60

inside

61  -  167

 

 

Pi

318.383448

Theta

227.536705

Tajima's D

1.273424

CLR

5.644694

CSRT

0.736413179341033

Interpretation

Uncertain