Silkworm Genome Informatics Database

Gene

KWMTBOMO09154

Pre Gene Modal

BGIBMGA003374

Annotation

PREDICTED:_serine/threonine-protein_phosphatase_2A_regulatory_subunit_B''_subunit_delta-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr15(-):12332771-12376047 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.395

CDS

ATGCCTTTGTTTCTGGCCACTCAACAGAATCTACACCTCCCTATCGACGGACACAAATTCATTGACTTCTGGAGAGAAATGACGTCACAGTGTCACGATCAGGCGTCGCGGTTCGTGTACATTTTGACGCGAGGGAAGAGCAGCATTCTAACTCCAGAAGATTTTGTTCCTCTCGTCCAAGACGTTGTGGACACTCACCCTGGACTCTCGTTTTTGAAGGAAGCCACCGAGTTTCACTCCAGATACGTGCACACTGTGATCGCTAGGATATTCTACTGTGTGAATAGATCGTGGTCGGGAAGAATATCGATTCCGGAGCTGAGAAGATCGAATTTACTACAAATCATTCAATTGTTAGAAGACGAGGAGGACATAAATCAAGTCACGCAATATTTTAGTTACGAACACTTTTACGTGATTTACTGCAAGTTCTGGGAGTTGGATCGGGATCACGACTTATTCATAGACAGGCACGATCTCGCGAGGCACAATGATCACGCGCTATCGAGTCGAATGATAGAACGGGTGCTGTCTGGATGCGTAACTCGAGGTAACCAAAACCGTCTGACCCCTGACGGAGAACCCCGCATGTCCTACACGGAGTTCGTGTGGTTCCTACTCGCCGAAGAGGATAAAACTCATCCAACTGCCATCGAATACTGGTTCAGATGCATGGACATTGACGGCGATGGGTACATATCAATGTACGAACTCGAATACTTCTACGAGGAACAGATGCAGCGGATGGAAGCTATTGGCATAGAAACTCTGCCATTCAACGACTGCTTATGTCAGATGTTAGACATGGTGCATCCAGCCGAAACGGGAAAGATAACGTTGAGCGACTTGAAGAAATGCAAATTAACCCCAATATTCTTCGATACTTTCTTCAACTTGGAGAAGTACCTCGACCACGAACAAAGGGATCCGTTCGCTACTCAAAGAGACTCCGATTGCGAAATGTCAGAATGGGATAGATTCGCTGCTGAAGAATACGAACTCCTTGTAGCCGAAGAAGGCGGAAGCGAGGCCCAAGAACAAATCTCATACGATGAGACGGACGAAGACTGTTTGTCGCCCAATATGGATGATATAACGAATACTGAAGTGGTGGAGGATTCGAGCGTGGAAGAGTCGACGCTGAGCGAAGGCGGCCCTCTCGCGCCCGGCTACGTGAACCTTAGCACCATATATTCCCTCGGGACCGAACGGTGGAAACAACAGAACGCGACACTCAATAACGGACTCGCCGAGAAGAGGCTCCCAGAGAAACCTGTCCCTCCAGAAAAACCAGTCAGTCTGATGATGGTCAACGGCAAGATGGACAATCGGTACTCCGGCTTCAGCAACAACAGCTTCCTCTACTCCCAGCTACTCGGGTCTAGTGGAGTGCGAACCAGAGACCCGCCTTCGTACAGCGTCGCAACCGGTGGACTTGATGTGGATACGAAGAACGCAGTGTCTCCGGTTCGGTCCCCCGCGACGAGCCCCGTCAATGGCATCAACAAGATCTCCGATAACTACGAGAGGGCGATCGCAGAACGACTCAGTCCCCAACGAGACATATCGAGGGTGAACAGAAGCGGTCTCTTCAGTAAAGTGAATACGGGCATCGTCGCCAACAACGTGAAGAAGAATAGCCCCCGCAGGGACGAGGAGGACGGCGACTACGCTCGCGACAGTGACGAGTGCTCGATATAG

Protein

MPLFLATQQNLHLPIDGHKFIDFWREMTSQCHDQASRFVYILTRGKSSILTPEDFVPLVQDVVDTHPGLSFLKEATEFHSRYVHTVIARIFYCVNRSWSGRISIPELRRSNLLQIIQLLEDEEDINQVTQYFSYEHFYVIYCKFWELDRDHDLFIDRHDLARHNDHALSSRMIERVLSGCVTRGNQNRLTPDGEPRMSYTEFVWFLLAEEDKTHPTAIEYWFRCMDIDGDGYISMYELEYFYEEQMQRMEAIGIETLPFNDCLCQMLDMVHPAETGKITLSDLKKCKLTPIFFDTFFNLEKYLDHEQRDPFATQRDSDCEMSEWDRFAAEEYELLVAEEGGSEAQEQISYDETDEDCLSPNMDDITNTEVVEDSSVEESTLSEGGPLAPGYVNLSTIYSLGTERWKQQNATLNNGLAEKRLPEKPVPPEKPVSLMMVNGKMDNRYSGFSNNSFLYSQLLGSSGVRTRDPPSYSVATGGLDVDTKNAVSPVRSPATSPVNGINKISDNYERAIAERLSPQRDISRVNRSGLFSKVNTGIVANNVKKNSPRRDEEDGDYARDSDECSI

Uniprot

H9J1I7 A0A3S2LAQ1 A0A2H1W5Z1 A0A194R7X2 A0A194PQU2 A0A2A4IRX8 + More
A0A212F0C9

Pubmed

19121390 26354079 22118469

EMBL

BABH01023685 RSAL01000063 RVE49499.1 ODYU01006522 SOQ48447.1 KQ460615 + More
KPJ13752.1 KQ459602 KPI93500.1 NWSH01008517 PCG62535.1 AGBW02011130 OWR47167.1

Proteomes

UP000005204 UP000283053 UP000053240 UP000053268 UP000218220 UP000007151 + More

PRIDE

H9J1I7

Pfam

PF13499 EF-hand_7 + More
PF17958 EF-hand_13

Interpro

IPR018247   EF_Hand_1_Ca_BS        + More
IPR041534   EF-hand_13
IPR011992   EF-hand-dom_pair
IPR002048   EF_hand_dom

SUPFAM

SSF47473 SSF47473

ProteinModelPortal

H9J1I7 A0A3S2LAQ1 A0A2H1W5Z1 A0A194R7X2 A0A194PQU2 A0A2A4IRX8 + More
A0A212F0C9

PDB

4I5N E-value=1.13473e-116, Score=1076

KEGG

101739716 K11583 serine/threonine-protein phosphatase 2A regulatory subunit B'' | (RefSeq) serine/threonine-pr

GO

GO:0005509 GO:0004523 GO:0000287 GO:0015074 GO:0005739 GO:0016776 GO:0006811 GO:0016020 GO:0016876 GO:0043039

Length:

566

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00116

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00040

outside

1 - 566

Pi

287.480619

Theta

178.408413

Tajima's D

1.835881

CLR

0.305572

CSRT

0.858107094645268

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics