SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09137
Pre Gene Modal
BGIBMGA007544
Annotation
PREDICTED:_SPRY_domain-containing_protein_7_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.954
 

Sequence

CDS
ATGTTTTGTTGTTTAAAGAGTTGTATGAATGGGTTCACACTTACACCTAGCGTACCGGTTAGAATCAAAGAAAATCCAGTACAATTAGATACTTTACATATGGGAAATGAAATGGTGATAATAAAAGGCGGTCAGAGGGTTTGTGGGTCGGGCTGTGCTCTTGGCAACACCCCTCTGTTACAGAATAAAGCTTATTTCGAAGTAAAGCTTCAGCAGGGAGGTGTATGGGCTGTGGGCCTTGTTACTAGGGAAACAGATCTTAATAGAGTTCATGGCGGCATGGACAAAGATTCGTGGTGCTTAAACAGCGACGGTACAGTGAGAAGCGACAACGTTGAGTTATACCACTTAGCTCCGGCGCCAAGAGAATCTCCTACCGACGAACTTCTAGTCTCTACTGAATCTCCCACTCATACAGAAAACGAAAAGATAGAGAATGAGAAGAAGGATGTTAGTGCGGCAGCGGTAATGCCGCTGGAGGGCGACACGATTGGTGTCGCTTACGACCACGTCGAATTAAATTTCTTCTTGAACGGCAAGAATATGGAGATACCTGTAAGGAATATCAAAGGAACGGTATATCCAGCTTTGTACGTTGATGACGGCGCGATATTGGACATTATCTTGGACAATTTCCTGTATCCGCCACCGTCGGGCTTCGAAAAGATAATGGTCGAGCAGTCGCTACTCTAA
Protein
MFCCLKSCMNGFTLTPSVPVRIKENPVQLDTLHMGNEMVIIKGGQRVCGSGCALGNTPLLQNKAYFEVKLQQGGVWAVGLVTRETDLNRVHGGMDKDSWCLNSDGTVRSDNVELYHLAPAPRESPTDELLVSTESPTHTENEKIENEKKDVSAAAVMPLEGDTIGVAYDHVELNFFLNGKNMEIPVRNIKGTVYPALYVDDGAILDIILDNFLYPPPSGFEKIMVEQSLL

Summary

EMBL
BABH01030067    NWSH01001662    PCG70493.1    ODYU01000447    SOQ35243.1    KQ460615    + More
KPJ13738.1    KQ459602    KPI93488.1    AGBW02013545    OWR43224.1    RSAL01000115    RVE46912.1    AP017517    BBB06861.1    DS232180    EDS36854.1    GFDF01005196    JAV08888.1    AJVK01014105    GFDL01010672    JAV24373.1    AJWK01024836    GFDF01005197    JAV08887.1    JTDY01001686    KOB73160.1    CH477194    EAT48463.1    JXUM01015708    KQ560438    KXJ82402.1    UFQT01001311    SSX29961.1    UFQS01002871    UFQT01002871    SSX14809.1    SSX34199.1    KQ971343    EFA03087.1    GEZM01063706    JAV69011.1    APCN01000848    AAAB01008987    EAA01395.3    AXCN02000029    ADMH02002091    ETN59351.1    GGFK01012588    MBW45909.1    AXCM01015102    GGFK01012589    MBW45910.1    GGFM01005697    MBW26448.1    GGFJ01008786    MBW57927.1    AXCP01007550    GGFM01008038    MBW28789.1    GGFM01005696    MBW26447.1    GL437238    EFN70784.1    KK107494    QOIP01000006    EZA49846.1    RLU22149.1    KQ979060    KYN23176.1    KQ435007    KZC13447.1    KZ288331    PBC27896.1    ADTU01010507    ADTU01010508    ADTU01010509    ADTU01010510    ADTU01010511    KQ982577    KYQ54634.1    GANO01000042    JAB59829.1    GL449285    EFN83036.1    NEVH01021953    PNF19028.1    GBYB01003395    JAG73162.1    KK853131    KDR10905.1    GECZ01003679    JAS66090.1    DS235124    EEB12265.1    CCAG010003318    GECU01018535    JAS89171.1    APGK01037631    KB740948    KB632364    ENN77397.1    ERL93600.1    GEBQ01030635    GEBQ01025674    GEBQ01015004    GEBQ01001636    GEBQ01001188    JAT09342.1    JAT14303.1    JAT24973.1    JAT38341.1    JAT38789.1    AAZX01013482    GEDC01021263    GEDC01001415    JAS16035.1    JAS35883.1    JXJN01020079    CH902617    EDV42966.1    GAMC01005261    GAMC01005260    JAC01296.1    GDIQ01054835    JAN39902.1    CM000160    EDW95840.1    CM000364    EDX12508.1    CH954181    EDV48660.1    AE014297    AY094871    AAF55487.1    AAM11224.1    CH916374    EDV91258.1    OUUW01000007    SPP83432.1    JRES01001227    KNC24455.1    CH479185    EDW38423.1    CM000070    EAL29102.1    JH431849    LBMM01001254    KMQ96639.1    KQ976724    KYM76638.1    CP012526    ALC46500.1    GL732529    EFX86824.1    GEFH01005273    JAP63308.1    GAKP01005551    JAC53401.1    CH940650    EDW67105.1    CVRI01000007    CRK88408.1    GEDV01005373    JAP83184.1    KQ981272    KYN43840.1   
Pfam
PF00622   SPRY        + More
PF07679   I-set
PF01247   Ribosomal_L35Ae
Interpro
IPR035766   SPRYD7        + More
IPR013320   ConA-like_dom_sf       
IPR003877   SPRY_dom       
IPR001870   B30.2/SPRY       
IPR036179   Ig-like_dom_sf       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR013098   Ig_I-set       
IPR018266   Ribosomal_L35Ae_CS       
IPR001780   Ribosomal_L35A       
IPR038661   L35A_sf       
IPR009000   Transl_B-barrel_sf       
SUPFAM
SSF49899   SSF49899        + More
SSF48726   SSF48726       
SSF50447   SSF50447       
Gene 3D

Ontologies

Topology

Length:
230
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01865
Exp number, first 60 AAs:
0.00115
Total prob of N-in:
0.08502
outside
1  -  230
 
 

Population Genetic Test Statistics

Pi
331.0822
Theta
192.705958
Tajima's D
2.440779
CLR
0.034429
CSRT
0.937803109844508
Interpretation
Uncertain
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