Gene

KWMTBOMO09136  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007553

Annotation

C-type_lectin_16_precursor_[Bombyx_mori]

Location

Bomo_Chr15(-):11919925-11935650      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.965

CDS

ATGAAGACATCAGTACTCGTATTAGCTGCGCTAGCGGTGGTGGCCCAGGCACAGTTCCCCAATGGACGCATCCTGGAGCCTCCGGTGCCTTCTTTGTGTGTACAGAGAAACATCCATGAGAGATACGCTGACAATAAAGGATACTTCTTCTCGTGGCGGGACCCAGCGCTCCGCGGCGTCGAAGAAGACTGGTTGAGCGCAAGAAACTACTGCCGACAACGCTGCATGGACCTAGTATCTCTCGAGACCAGCGATGAAAATGAATGGGTCAAAGCGCGTATTGTCCAGGACAAGATAAAGTACATTTGGACATCGGGCCGTCTTTGTGACTTCAAAGGATGCAACCGACCTGACTTACTACCTAACGAAATAAACGGTTGGTTCTGGACTGCTGAGCTGCAGAAGTTGGCTCCCACCACCAACCGTCAACAGAACGACTGGTCCGAAGGTGGCGGCATTGGAAAACCGCAACCTGATAACCGGGAGCTGATACAAGGAGGCGCTTCTGAGCACTGCGTCGCAATCTTAAACAACTTCTACAACGACGGTGTCCACTGGCACGACGTCGCCTGCCACCACCGCAAGCCATTCGTTTGCGAAGAAAACGACGCCCTCCTCAAATACGTCAGATATACCAATCCTAACTTAAGAGTTTAA

Protein

MKTSVLVLAALAVVAQAQFPNGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEINGWFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEENDALLKYVRYTNPNLRV

Uniprot

Q06FJ6   H9JDF6   A0A3S2NBT5   C5MKD8   A0A2A4JG01   A0A3G1HH33   + More
A0A194PJI4   A0A2H1VTL1   A0A194R7W3   I4DIW7   I4DM01   A0A212ENZ7   A0A0L7LKW9   A0A219YXG3   A0A336LMG5   A0A1W4WHX0   D6WDS2   A0A182X8X5   A0A453Z1Z7   A0A182I407   A0A182WC61   A0A182PID1   A0A182YP87   A0A182MT07   A0A182LL24   A0A0T6BGK5   A0A2Z5U8B4   A0A182FEZ6   A0A182QLT4   A0NET0   A0A182IMV9   A0A1J1HZE0   B0WCD7   A0A182NJ63   A0A1Q3FPK1   K7J8I6   A0A232FBA3   Q27U52   T1PIW2   Q16HZ2   A0A182GV37   A0A0K8U027   A0A034WGB5   A0A0L0CLR7   A0A0A1XNU4   A0A1I8NX82   E2BE27   A0A0M3QXR0   W8C1U0   A0A2P8YH27   B4K9E8   B4N819   B3LZK9   B4LXK9   A0A026WID6   B3P1D5   B4JTJ5   A0A3B0JTP9   Q295Q6   B4GFU6   A0A067QXP7   B4QSY0   B4HHE3   Q9VGA3   A0A195F1W0   B4PNQ7   A0A195E6H3   A0A195B1S9   A0A158NLD6   A0A195CY78   E2ATA6   F4X6L1   A0A171AVG9   A0A1W4UBI5   A0A2J7PRS1   A0A1V1G0Z1   A0A151XCB4   A0A1V1G4Y2   A0A087ZXS4   A0A2A3E3G0   E9IZ65   T1H8Y7   A0A1B6HNC4   A0A0L7R4U9   A0A1B6CVR4   A0A146L1I4   A0A0A9W0J6   N6U9S1   A0A310SLC1   A0A154PGK1   A0A0N0BH81   U4UBI5   A0A0K8S2Z9   N6UNW5   U4U2V5   A0A2P8Y7L9   A0A067RBR3   A0A1V1FIP4   A0A2H1X2K3  

Pubmed

19121390    19442669    26354079    22651552    22118469    26227816    + More
18362917    19820115    25244985    20966253    12364791    14747013    17210077    20075255    28648823    16907828    25315136    17510324    26483478    25348373    26108605    25830018    20798317    24495485    29403074    17994087    24508170    30249741    15632085    24845553    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    21347285    21719571    28410430    21282665    26823975    25401762    23537049   

EMBL

DQ898219    ABI79325.1    BABH01030069    RSAL01000115    RVE46913.1    GQ120500    + More
ACR78452.1    NWSH01001662    PCG70494.1    KY111306    AQX37242.1    KQ459602    KPI93487.1    ODYU01004370    SOQ44179.1    KQ460615    KPJ13737.1    AK401235    BAM17857.1    AK402319    BAM18941.1    AGBW02013545    OWR43225.1    JTDY01000728    KOB76087.1    KX550114    AQY54431.1    UFQS01000016    UFQT01000016    SSW97457.1    SSX17843.1    KQ971322    EFA01339.2    APCN01002263    APCN01002264    AXCM01002383    AXCM01002384    LJIG01000514    KRT86426.1    AP017517    BBB06860.1    AXCN02000455    AAAB01008960    EAU76601.1    CVRI01000035    CRK92692.1    DS231886    EDS43382.1    GFDL01005515    JAV29530.1    NNAY01000478    OXU28106.1    DQ377067    ABD60991.1    KA648614    AFP63243.1    CH478126    CH478056    EAT33884.1    EAT34165.1    EJY58059.1    JXUM01090266    JXUM01090267    JXUM01090268    KQ563828    KXJ73210.1    GDHF01032441    JAI19873.1    GAKP01005243    GAKP01005242    JAC53709.1    JRES01000223    KNC33206.1    GBXI01001675    JAD12617.1    GL447755    EFN86014.1    CP012526    ALC46363.1    GAMC01003407    JAC03149.1    PYGN01000600    PSN43551.1    CH933806    EDW15580.1    CH964232    EDW81270.1    CH902617    EDV41951.1    CH940650    EDW66793.1    KK107185    QOIP01000012    EZA55812.1    RLU15747.1    CH954181    EDV49394.1    CH916373    EDV95085.1    OUUW01000008    SPP84433.1    CM000070    EAL28652.1    CH479182    EDW34481.1    KK853131    KDR10900.1    CM000364    EDX13240.1    CH480815    EDW42482.1    AE014297    BT030988    AAF54782.2    ABV82370.1    KQ981864    KYN34366.1    CM000160    EDW97072.1    KQ979568    KYN20773.1    KQ976662    KYM78428.1    ADTU01019320    KQ977115    KYN05608.1    GL442545    EFN63351.1    GL888818    EGI57793.1    GEMB01000604    JAS02528.1    NEVH01021953    PNF19019.1    FX985244    BAX07257.1    KQ982314    KYQ58021.1    FX985243    BAX07256.1    KZ288430    PBC25832.1    GL767119    EFZ14123.1    ACPB03000427    GECU01031519    JAS76187.1    KQ414657    KOC65801.1    GEDC01019781    JAS17517.1    GDHC01016215    JAQ02414.1    GBHO01042245    JAG01359.1    APGK01034109    KB740904    ENN78440.1    KQ760118    OAD61924.1    KQ434893    KZC10594.1    KQ435757    KOX75842.1    KB632006    ERL87951.1    GBRD01018165    JAG47662.1    APGK01003087    APGK01018482    APGK01018483    KB740076    KB735111    ENN81657.1    ENN83445.1    KB631643    ERL84921.1    PYGN01000830    PSN40257.1    KK852561    KDR21331.1    FX985238    BAX07251.1    ODYU01012907    SOQ59446.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000037510    UP000192223    UP000007266    UP000076407    UP000075903    UP000075840    UP000075920    UP000075885    UP000076408    UP000075883    UP000075882    UP000069272    UP000075886    UP000007062    UP000075880    UP000183832    UP000002320    UP000075884    UP000002358    UP000215335    UP000095301    UP000008820    UP000069940    UP000249989    UP000037069    UP000095300    UP000008237    UP000092553    UP000245037    UP000009192    UP000007798    UP000007801    UP000008792    UP000053097    UP000279307    UP000008711    UP000001070    UP000268350    UP000001819    UP000008744    UP000027135    UP000000304    UP000001292    UP000000803    UP000078541    UP000002282    UP000078492    UP000078540    UP000005205    UP000078542    UP000000311    UP000007755    UP000192221    UP000235965    UP000075809    UP000005203    UP000242457    UP000015103    UP000053825    UP000019118    UP000076502    UP000053105    UP000030742   

PRIDE

Q06FJ6    H9JDF6    Q9VGA3   

Pfam

PF09497   Med12        + More
PF12145   Med12-LCEWAV
PF00059   Lectin_C

Interpro

IPR016186   C-type_lectin-like/link_sf        + More
IPR001304   C-type_lectin-like       
IPR018378   C-type_lectin_CS       
IPR016187   CTDL_fold       
IPR019035   Mediator_Med12       
IPR021990   Mediator_Med12_LCEWAV       

SUPFAM

SSF56436   SSF56436       

Gene 3D

3.10.100.10    

ProteinModelPortal

Q06FJ6   H9JDF6   A0A3S2NBT5   C5MKD8   A0A2A4JG01   A0A3G1HH33   + More
A0A194PJI4   A0A2H1VTL1   A0A194R7W3   I4DIW7   I4DM01   A0A212ENZ7   A0A0L7LKW9   A0A219YXG3   A0A336LMG5   A0A1W4WHX0   D6WDS2   A0A182X8X5   A0A453Z1Z7   A0A182I407   A0A182WC61   A0A182PID1   A0A182YP87   A0A182MT07   A0A182LL24   A0A0T6BGK5   A0A2Z5U8B4   A0A182FEZ6   A0A182QLT4   A0NET0   A0A182IMV9   A0A1J1HZE0   B0WCD7   A0A182NJ63   A0A1Q3FPK1   K7J8I6   A0A232FBA3   Q27U52   T1PIW2   Q16HZ2   A0A182GV37   A0A0K8U027   A0A034WGB5   A0A0L0CLR7   A0A0A1XNU4   A0A1I8NX82   E2BE27   A0A0M3QXR0   W8C1U0   A0A2P8YH27   B4K9E8   B4N819   B3LZK9   B4LXK9   A0A026WID6   B3P1D5   B4JTJ5   A0A3B0JTP9   Q295Q6   B4GFU6   A0A067QXP7   B4QSY0   B4HHE3   Q9VGA3   A0A195F1W0   B4PNQ7   A0A195E6H3   A0A195B1S9   A0A158NLD6   A0A195CY78   E2ATA6   F4X6L1   A0A171AVG9   A0A1W4UBI5   A0A2J7PRS1   A0A1V1G0Z1   A0A151XCB4   A0A1V1G4Y2   A0A087ZXS4   A0A2A3E3G0   E9IZ65   T1H8Y7   A0A1B6HNC4   A0A0L7R4U9   A0A1B6CVR4   A0A146L1I4   A0A0A9W0J6   N6U9S1   A0A310SLC1   A0A154PGK1   A0A0N0BH81   U4UBI5   A0A0K8S2Z9   N6UNW5   U4U2V5   A0A2P8Y7L9   A0A067RBR3   A0A1V1FIP4   A0A2H1X2K3  

PDB

5VC1     E-value=0.0119463,     Score=87

KEGG

767624    no KO assigned | (RefSeq) CTL16, BmCTL16; C-type lectin 16

GO

GO:0030246   GO:0006357   GO:0016592   GO:0003712  

SignalP

Position:   1 - 17,         Likelihood:  0.998596

 

 

Length:

218

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.44215

Exp number, first 60 AAs:

0.44215

Total prob of N-in:

0.07732

outside

1  -  218

 

 

Pi

262.123458

Theta

185.035012

Tajima's D

1.18638

CLR

1.411187

CSRT

0.710464476776161

Interpretation

Uncertain