Gene

KWMTBOMO09131

Pre Gene Modal

BGIBMGA007556

Annotation

PREDICTED:_protein_cereblon_homolog_[Papilio_polytes]

Location

Bomo_Chr15(-):11860289-11861490      View in EpiBrowser

Full name

Protein yippee-like      

Location in the cell

Extracellular   Reliability : 3.71

CDS

ATGTTTGACATCTTACATTCATTGTTAATACTATTTTTCATATGCTGCACATTAATTGGAGTTACTGATCAACATGAAAATTCTAAAAACCTCGGACAAGAATTAATATTGTGTCGGAAATGTGGTGCTGATGTAGCCGATTCACATTATTTATTCAGCAAACAAAGTCCAGGAGCGCTAACAATAGACAAACAAAACCTGTTTGGCCACCAAAATGCTACAGTGCAAACATTAGTGAATCCATTTGGAGTGAAATTTGATATAGTTACTCTAGAAAAAGCAAAATGTGAAAATGTGGGCCCACCCCAAGGGGCTGATTCCTGGTTTCCCGGCTACACATGGCGTATATGTGCATGTCCTCATTGTGGCCAGCACCTTGGCTGGACGTTTGAGTCGACAGATTTGAGTCTTACCAAAGCAAAGGAACATGTTCACTCATTTCACGGTTTCATACTGAGTAATGTACTTGGAGAAAATTTTACGGATTCTCTTATAATGATGCCAAAAATGTATAAAATGTAA

Protein

MFDILHSLLILFFICCTLIGVTDQHENSKNLGQELILCRKCGADVADSHYLFSKQSPGALTIDKQNLFGHQNATVQTLVNPFGVKFDIVTLEKAKCENVGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSLTKAKEHVHSFHGFILSNVLGENFTDSLIMMPKMYKM

Similarity

Belongs to the yippee family.

Feature

chain  Protein yippee-like

Uniprot

H9JDF9   A0A2A4JFM2   A0A2H1V7E5   A0A437B8Q9   S4NNC4   A0A2J7R140   + More
A0A067RMY0   A0A0L7LNI8   A0A1L8DBT3   A0A1L8DP13   C6FFU8   A0A232EQJ0   A0A1B0GPS4   A0A1B6L7Y3   A0A0K8TPX7   K7IQ93   A0A1B0CK45   A0A2S2NPL2   A0A0P4VJS5   A0A224XY88   A0A161MKT7   A0A1Q3FEE9   Q16NI0   A0A2H8TGR7   U5EPA1   A0A023EIR5   B0X7G7   J9JZ30   A0A2K8JPA8   A0A433UCL3   A0A1B6EXK8   A0A0B6Z9X6   A0A1B6I8U3   A0A0A9WYM4   A0A182KCG6   A0A1S3HXW9   A0A023EHX3   A0A182XX18   A0A0A9WVN6   A0A182QBI3   A0A182XG20   A0NDG5   A0A182ID66   A0A182W180   A0A444UQY7   A0A2B4SCM2   A0A444V2J0   A7S0B6   A0A182L701   A0A182RX66   A0A182NCX7   A0A2R7X5L6   W5MFV3   C3ZQP4   A0A0L8FMN4   A0A401NGX3   A0A0P4WYK3   A0A182GLT5   F6QMC5   A0A336LS51   A0A2I4BQN7   A0A0P7UHA7   A0A0P6JL20   A0A3P7F026   A0A437D1G3   H3B4M9   A0A0R3RYV0   A0A3P6SSX3   A0A369S5N6   A0A3N0XLC3   B0S5D3   A0A3B4FFE7   A0A3P8N866   A0A3P9CXI6   A0A3Q0R1H6   A0A0K0JIB8   B3S464   A0A1S0ULS0   A0A1I8EHX2   A0A3Q2WPM7   A0A3Q4HG18   A0A3Q3J602   H2YTW4   E9GW47   A0A3Q3SIZ4   A0A210QMV2   A0A087Y6J4   A0A0H5S7U3   V4ALI2   A0A2U9BTY1   A0A3B3QPP9   A0A2M4AXV0   A0A0P6EP79   A0A2M4AX87   A0A3S2T9Y9   W5KZ12   A0A3B4DHS1  

Pubmed

19121390    23622113    24845553    26227816    19555500    28648823    + More
26369729    20075255    27129103    17510324    24945155    25401762    25244985    12364791    14747013    17210077    17615350    20966253    18563158    30297745    26483478    12481130    15114417    9215903    30042472    23594743    25186727    17885136    18719581    26850696    21292972    28812685    23254933    29240929    25329095   

EMBL

BABH01030073    NWSH01001662    PCG70498.1    ODYU01001058    SOQ36770.1    RSAL01000115    + More
RVE46917.1    GAIX01013991    JAA78569.1    NEVH01008214    PNF34553.1    KK852413    KDR24418.1    JTDY01000455    KOB77103.1    GFDF01010161    JAV03923.1    GFDF01005892    JAV08192.1    EZ000636    ACS93500.1    NNAY01002773    OXU20587.1    AJVK01060061    GEBQ01020266    JAT19711.1    GDAI01001653    JAI15950.1    AJWK01015750    GGMR01006475    MBY19094.1    GDKW01002105    JAI54490.1    GFTR01002886    JAW13540.1    GEMB01002737    JAS00458.1    GFDL01009120    JAV25925.1    CH477823    EAT35914.1    GFXV01001480    MBW13285.1    GANO01004793    JAB55078.1    GAPW01005074    JAC08524.1    DS232451    EDS41917.1    ABLF02019684    KY031112    ATU82863.1    RQTK01000008    RUS91630.1    GECZ01027159    JAS42610.1    HACG01018322    CEK65187.1    GECU01024358    JAS83348.1    GBHO01031083    JAG12521.1    GAPW01005113    JAC08485.1    GBHO01031082    GBRD01011118    JAG12522.1    JAG54706.1    AXCN02001560    AAAB01008880    EAU76985.1    APCN01005034    SCEB01018393    RXM90578.1    LSMT01000110    PFX27126.1    SCEB01003103    RXM94681.1    DS469560    EDO42848.1    KK857348    PTY27077.1    AHAT01035513    GG666662    EEN45090.1    KQ428707    KOF65954.1    BFAA01002372    GCB60178.1    GDIP01250682    LRGB01002580    JAI72719.1    KZS07055.1    JXUM01073060    JXUM01073061    JXUM01073062    JXUM01073063    JXUM01073064    KQ562755    KXJ75190.1    UFQS01000097    UFQT01000097    SSW99421.1    SSX19801.1    JARO02004949    KPP67621.1    GDIQ01015563    JAN79174.1    UYWW01012672    VDM21919.1    CM012445    RVE68691.1    AFYH01037974    UYRX01000240    VDK78276.1    NOWV01000061    RDD42130.1    RJVU01069905    ROI64787.1    BX088526    DS985249    EDV22591.1    JH712072    EJD76529.1    GL732569    EFX76280.1    NEDP02002776    OWF50053.1    AYCK01002625    LN856986    CRZ24778.1    KB201612    ESO95620.1    CP026251    AWP07687.1    GGFK01012280    MBW45601.1    GDIQ01073421    JAN21316.1    GGFK01012069    MBW45390.1    RSAL01007751    RVE39827.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000235965    UP000027135    UP000037510    + More
UP000215335    UP000092462    UP000002358    UP000092461    UP000008820    UP000002320    UP000007819    UP000271974    UP000075881    UP000085678    UP000076408    UP000075886    UP000076407    UP000007062    UP000075840    UP000075920    UP000225706    UP000001593    UP000075882    UP000075900    UP000075884    UP000018468    UP000001554    UP000053454    UP000288216    UP000076858    UP000069940    UP000249989    UP000008144    UP000192220    UP000034805    UP000270924    UP000008672    UP000050640    UP000277928    UP000253843    UP000000437    UP000261460    UP000265100    UP000265160    UP000261340    UP000006672    UP000009022    UP000093561    UP000264840    UP000261580    UP000261600    UP000007875    UP000000305    UP000261640    UP000242188    UP000028760    UP000030746    UP000246464    UP000261540    UP000018467    UP000261440   

PRIDE

H9JDF9   

Pfam

PF03226   Yippee-Mis18        + More
PF00808   CBFD_NFYB_HMF
PF06585   JHBP

Interpro

IPR004910   Yippee/Mis18/Cereblon        + More
IPR034750   CULT       
IPR013087   Znf_C2H2_type       
IPR009072   Histone-fold       
IPR003958   CBFA_NFYB_domain       
IPR038606   To_sf       
IPR010562   Haemolymph_juvenile_hormone-bd       

SUPFAM

SSF47113   SSF47113       

Gene 3D

1.10.20.10     3.15.10.30    

CDD

cd15777  CRBN_C_like

ProteinModelPortal

H9JDF9   A0A2A4JFM2   A0A2H1V7E5   A0A437B8Q9   S4NNC4   A0A2J7R140   + More
A0A067RMY0   A0A0L7LNI8   A0A1L8DBT3   A0A1L8DP13   C6FFU8   A0A232EQJ0   A0A1B0GPS4   A0A1B6L7Y3   A0A0K8TPX7   K7IQ93   A0A1B0CK45   A0A2S2NPL2   A0A0P4VJS5   A0A224XY88   A0A161MKT7   A0A1Q3FEE9   Q16NI0   A0A2H8TGR7   U5EPA1   A0A023EIR5   B0X7G7   J9JZ30   A0A2K8JPA8   A0A433UCL3   A0A1B6EXK8   A0A0B6Z9X6   A0A1B6I8U3   A0A0A9WYM4   A0A182KCG6   A0A1S3HXW9   A0A023EHX3   A0A182XX18   A0A0A9WVN6   A0A182QBI3   A0A182XG20   A0NDG5   A0A182ID66   A0A182W180   A0A444UQY7   A0A2B4SCM2   A0A444V2J0   A7S0B6   A0A182L701   A0A182RX66   A0A182NCX7   A0A2R7X5L6   W5MFV3   C3ZQP4   A0A0L8FMN4   A0A401NGX3   A0A0P4WYK3   A0A182GLT5   F6QMC5   A0A336LS51   A0A2I4BQN7   A0A0P7UHA7   A0A0P6JL20   A0A3P7F026   A0A437D1G3   H3B4M9   A0A0R3RYV0   A0A3P6SSX3   A0A369S5N6   A0A3N0XLC3   B0S5D3   A0A3B4FFE7   A0A3P8N866   A0A3P9CXI6   A0A3Q0R1H6   A0A0K0JIB8   B3S464   A0A1S0ULS0   A0A1I8EHX2   A0A3Q2WPM7   A0A3Q4HG18   A0A3Q3J602   H2YTW4   E9GW47   A0A3Q3SIZ4   A0A210QMV2   A0A087Y6J4   A0A0H5S7U3   V4ALI2   A0A2U9BTY1   A0A3B3QPP9   A0A2M4AXV0   A0A0P6EP79   A0A2M4AX87   A0A3S2T9Y9   W5KZ12   A0A3B4DHS1  

PDB

4CI3     E-value=5.78714e-09,     Score=140

KEGG

101738435    no KO assigned | (RefSeq) protein cereblon-like

GO

GO:0046872   GO:0016021   GO:0003676   GO:0031464   GO:0016567   GO:0046982   GO:0005634  

Subcellular location

Nucleus  

SignalP

Position:   1 - 22,         Likelihood:  0.935467

 

 

Length:

173

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

17.13833

Exp number, first 60 AAs:

16.81051

Total prob of N-in:

0.05715

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  21

inside

22  -  173

 

 

Pi

83.029895

Theta

103.205603

Tajima's D

-0.263987

CLR

51.417707

CSRT

0.297985100744963

Interpretation

Uncertain