Gene

KWMTBOMO09127  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007559

Annotation

PREDICTED:_transmembrane_protein_256_homolog_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr15(-):11765272-11768270      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.043

CDS

ATGATAAGAGCTCCATTGTGGCAACTTGCTCAAGAGGCCGGTCCTTTTGTTAGGCTGGCAGGACTAAGTGGTGCTGCTGCTGTAATCCTTGGTGCTATGGGAGCACATCGAACTTTCCCTGAGACTGAGGCTAAAGACGACTTGAAGAAAATATTTGAAACTGCCAATAGATTCCATTTTCTACATACCCTCGCTTTAGTAACCGTTCCTCTGTGTAGAAGACCGTATATAGCTGGTGCATTTTTTATTGCTGGTATGGGAATGTTCTGTGGAACTTGTTACTACCATGCTTTCACTGGTGATAGAAAATTGCGTCAAGTGACACCTCTCGGTGGGACCTGCTTAATCTTAGGATGGATTGCAATGGTTGGATGTGAATATTGGTTGGATGCTTCAATACTGTTGTTCATGGTGTGTATACCTTTGTAA

Protein

MIRAPLWQLAQEAGPFVRLAGLSGAAAVILGAMGAHRTFPETEAKDDLKKIFETANRFHFLHTLALVTVPLCRRPYIAGAFFIAGMGMFCGTCYYHAFTGDRKLRQVTPLGGTCLILGWIAMVGCEYWLDASILLFMVCIPL

Uniprot

H9JDG2   A0A3S2P7W3   A0A0L7L762   S4Q099   A0A212FCE8   A0A2A4JZP0   + More
A0A2H1V8H9   I4DL41   A0A194PQS2   I4DMX2   A0A194RCU1   A0A0L7QM55   A0A232F5S8   D6WKR5   K7IVT7   A0A224XZ65   A0A170Y2S0   A0A0V0G7A5   A0A069DPQ6   A0A023F8M8   A0A2R7WK27   A0A0N7Z8K7   R4FPR1   A0A0A9WV31   A0A1W4X3D0   A0A0A9Z1P3   N6TM80   J3JTL9   A0A151J6C3   A0A1B6ISR2   A0A1B6IEM7   E2B562   A0A1B6HMZ0   A0A1B6G254   A0A1B6H7A1   E2AG79   A0A1B6MLY9   A0A1B6F9X0   A0A195F917   A0A1B6G535   A0A1B6FEG1   A0A1B6MKH7   A0A195CFQ2   A0A1B6LU26   A0A1B6M772   A0A151WFM6   A0A1B6CVM9   A0A1B6C213   A0A1B6D1E7   A0A195BY34   A0A158NCA8   F4X836   R4V263   A0A067RKL5   A0A0M9A5R0   A0A2P8ZD02   A0A2P2HYC2   A0A0A1WWB4   A0A423T7S1   A0A0T6AUL6   A0A1L8D9J5   A0A034WLI9   A0A1L8D9X7   A0A0C9R7P0   A0A0K8V366   W8C187   A0A0K8TPY6   A0A444TB61   A0A0P4WI40   E2BD41   A0A087ZTD8   A0A2A3EBH6   A0A154PHG6   A0A182VNA0   A0A0P5P7X1   A0A023FR98   A0A182X9K3   A0A0P5WPF0   A0A0N8B1X4   A0A1C7CZS6   A0NH70   A0A182HKI6   A0A0P5M2U3   A0A023FPK5   A0A444SSB2   A0A0P5CS23   A0A0P5UPY5   A0A0P5CV16   E9G2A3   A0A0P5BY04   A0A0P6AI33   A0A182T9D0   A0A0P6IF34   A0A0P5TYE5   A0A182YBE4   A0A1I8JSV2   A0A0P6D6I5   U5ET33   A0A2M3ZIW1   A0A2M3ZAV0  

Pubmed

19121390    26227816    23622113    22118469    22651552    26354079    + More
28648823    18362917    19820115    20075255    26334808    25474469    27129103    25401762    26823975    23537049    22516182    20798317    21347285    21719571    24845553    29403074    25830018    25348373    24495485    26369729    20966253    12364791    14747013    17210077    21292972    25244985   

EMBL

BABH01030078    RSAL01000223    RVE43997.1    JTDY01002476    KOB71337.1    GAIX01000158    + More
JAA92402.1    AGBW02009204    OWR51387.1    NWSH01000352    PCG77114.1    ODYU01001228    SOQ37153.1    AK402009    BAM18631.1    KQ459602    KPI93480.1    AK402640    BAM19262.1    KQ460615    KPJ13726.1    KQ414894    KOC59697.1    NNAY01000939    OXU25823.1    KQ971342    EFA03033.1    GFTR01002516    JAW13910.1    GEMB01003726    JAR99494.1    GECL01002909    JAP03215.1    GBGD01003089    JAC85800.1    GBBI01000995    JAC17717.1    KK854966    PTY19997.1    GDKW01003075    JAI53520.1    ACPB03005605    GAHY01000749    JAA76761.1    GBHO01031267    GDHC01011618    JAG12337.1    JAQ07011.1    GBHO01005215    GBRD01013588    GDHC01018426    JAG38389.1    JAG52238.1    JAQ00203.1    APGK01018912    KB740085    KB632303    ENN81559.1    ERL91824.1    BT126576    AEE61540.1    KQ979863    KYN18755.1    GECU01017737    JAS89969.1    GECU01022310    JAS85396.1    GL445725    EFN89156.1    GECU01031659    JAS76047.1    GECZ01013254    JAS56515.1    GECU01037099    JAS70607.1    GL439266    EFN67570.1    GEBQ01003023    JAT36954.1    GECZ01022759    JAS47010.1    KQ981727    KYN37100.1    GECZ01012232    JAS57537.1    GECZ01021184    JAS48585.1    GEBQ01003618    JAT36359.1    KQ977873    KYM99131.1    GEBQ01012807    JAT27170.1    GEBQ01008195    JAT31782.1    KQ983211    KYQ46640.1    GEDC01019742    JAS17556.1    GEDC01029747    JAS07551.1    GEDC01017822    JAS19476.1    KQ976396    KYM92853.1    ADTU01011778    ADTU01011779    GL888912    EGI57385.1    KC740993    AGM32817.1    KK852413    KDR24416.1    KQ435736    KOX77016.1    PYGN01000097    PSN54374.1    IACF01001047    LAB66774.1    GBXI01011569    JAD02723.1    QCYY01002142    ROT72494.1    LJIG01022814    KRT78581.1    GFDF01011057    JAV03027.1    GAKP01002511    GAKP01002510    JAC56441.1    GFDF01010954    JAV03130.1    GBYB01008842    JAG78609.1    GDHF01018965    JAI33349.1    GAMC01003647    GAMC01003646    JAC02909.1    GDAI01001141    JAI16462.1    SAUD01005397    RXG67213.1    GDRN01049333    GDRN01049332    JAI66572.1    GL447563    EFN86383.1    KZ288292    PBC29087.1    KQ434905    KZC11247.1    GDIQ01136700    JAL15026.1    GBBK01001244    JAC23238.1    GDIP01096118    JAM07597.1    GDIQ01220867    JAK30858.1    AAAB01008987    EAU75720.1    APCN01000831    GDIQ01161393    JAK90332.1    GBBK01001243    JAC23239.1    SAUD01024938    RXG56285.1    GDIP01167655    JAJ55747.1    GDIP01127414    JAL76300.1    GDIP01169302    JAJ54100.1    GL732530    EFX86338.1    GDIP01178349    JAJ45053.1    GDIP01029464    JAM74251.1    GDIQ01022490    JAN72247.1    GDIP01122612    JAL81102.1    GDIQ01089968    JAN04769.1    GANO01002112    JAB57759.1    GGFM01007720    MBW28471.1    GGFM01004915    MBW25666.1   

Proteomes

UP000005204    UP000283053    UP000037510    UP000007151    UP000218220    UP000053268    + More
UP000053240    UP000053825    UP000215335    UP000007266    UP000002358    UP000015103    UP000192223    UP000019118    UP000030742    UP000078492    UP000008237    UP000000311    UP000078541    UP000078542    UP000075809    UP000078540    UP000005205    UP000007755    UP000027135    UP000053105    UP000245037    UP000283509    UP000288706    UP000005203    UP000242457    UP000076502    UP000075903    UP000076407    UP000075882    UP000007062    UP000075840    UP000000305    UP000075901    UP000076408    UP000069272   

PRIDE

H9JDG2   

Pfam

PF04241   DUF423        + More
PF08487   VIT
PF13519   VWA_2
PF00092   VWA
PF00253   Ribosomal_S14
PF04281   Tom22

Interpro

IPR006696   DUF423        + More
IPR013694   VIT       
IPR036465   vWFA_dom_sf       
IPR002035   VWF_A       
IPR001209   Ribosomal_S14       
IPR018271   Ribosomal_S14_CS       
IPR023676   Ribosomal_S14_type-Z_arc       
IPR005683   Tom22       

SUPFAM

SSF53300   SSF53300       

ProteinModelPortal

H9JDG2   A0A3S2P7W3   A0A0L7L762   S4Q099   A0A212FCE8   A0A2A4JZP0   + More
A0A2H1V8H9   I4DL41   A0A194PQS2   I4DMX2   A0A194RCU1   A0A0L7QM55   A0A232F5S8   D6WKR5   K7IVT7   A0A224XZ65   A0A170Y2S0   A0A0V0G7A5   A0A069DPQ6   A0A023F8M8   A0A2R7WK27   A0A0N7Z8K7   R4FPR1   A0A0A9WV31   A0A1W4X3D0   A0A0A9Z1P3   N6TM80   J3JTL9   A0A151J6C3   A0A1B6ISR2   A0A1B6IEM7   E2B562   A0A1B6HMZ0   A0A1B6G254   A0A1B6H7A1   E2AG79   A0A1B6MLY9   A0A1B6F9X0   A0A195F917   A0A1B6G535   A0A1B6FEG1   A0A1B6MKH7   A0A195CFQ2   A0A1B6LU26   A0A1B6M772   A0A151WFM6   A0A1B6CVM9   A0A1B6C213   A0A1B6D1E7   A0A195BY34   A0A158NCA8   F4X836   R4V263   A0A067RKL5   A0A0M9A5R0   A0A2P8ZD02   A0A2P2HYC2   A0A0A1WWB4   A0A423T7S1   A0A0T6AUL6   A0A1L8D9J5   A0A034WLI9   A0A1L8D9X7   A0A0C9R7P0   A0A0K8V366   W8C187   A0A0K8TPY6   A0A444TB61   A0A0P4WI40   E2BD41   A0A087ZTD8   A0A2A3EBH6   A0A154PHG6   A0A182VNA0   A0A0P5P7X1   A0A023FR98   A0A182X9K3   A0A0P5WPF0   A0A0N8B1X4   A0A1C7CZS6   A0NH70   A0A182HKI6   A0A0P5M2U3   A0A023FPK5   A0A444SSB2   A0A0P5CS23   A0A0P5UPY5   A0A0P5CV16   E9G2A3   A0A0P5BY04   A0A0P6AI33   A0A182T9D0   A0A0P6IF34   A0A0P5TYE5   A0A182YBE4   A0A1I8JSV2   A0A0P6D6I5   U5ET33   A0A2M3ZIW1   A0A2M3ZAV0  

KEGG

101739214    no KO assigned | (RefSeq) transmembrane protein 256 homolog

GO

GO:0016021   GO:0008270   GO:0015935   GO:0003735   GO:0003723   GO:0006412   GO:0005741   GO:0006886  

PANTHER

PTHR43461   PTHR12504  

Length:

142

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

64.11617

Exp number, first 60 AAs:

19.51117

Total prob of N-in:

0.80395

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  75

TMhelix

76  -  98

inside

99  -  106

TMhelix

107  -  129

outside

130  -  142

 

 

Pi

47.707572

Theta

180.285188

Tajima's D

-1.602423

CLR

5842.335493

CSRT

0.0467476626168692

Interpretation

Uncertain