Silkworm Genome Informatics Database

Gene

KWMTBOMO09123

Pre Gene Modal

BGIBMGA007538

Annotation

PREDICTED:_zinc_finger_protein_528_[Bombyx_mori]

Location

Bomo_Chr15(+):11711031-11715728 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 3.657

CDS

ATGAGTGCTAATGTGGCTTCTTTTCCATGCCCAGTATGTACACTGTCGGGTGTTTTTTTTACGGCACAATCATTAAGAGATAGGCTAATACAAGTTTCGACAAATAAAATTTTGTGTCCAGTTTGTCAAGAAGAGATCATTGGCTTGGATAAGTTAACTATACACTTATTTAGCCACGTTAAGCTTCTGGCAGCGAACGAAAATGTTGATAAGGATCGAGTAAGTGATGTGAAAATTATACCAAAAAAGAAACACGATCTAGTACTGCCACAGAAGAAACCAAAACCGTCGACGTCTAAAAATAAACCTCAACCATCAACAGTAAACACGCCGGTGAAGTTCGTCAAGATTTATCCCAAATTTCCAGTTATATCGTTAAATACTTTACCTATAATAGATATATCACAACTCTCATCGAAAGATTGCATACAACAACGTGAAAAGGTTTTTGTAAAAGCCGAATCAGCAGTTTTACAAGCAAACACAGCATGCAATATTTGCGGACTGCAGTTTGTCGATGAGAACATTCTAAAGGTGCACCGATGCTTAATACACAATATTGATGACGATGCAAATTCTACAATAACAACATACCAGTGTCACCTGTGCCCAAAGAAATTTAAAATGAGAGGATCTTTGATGGTTCATCTAAGAGTTGCACATTTTGGATTTTCGGCGGGAAATAAAAAGTGTCCTGCAGAAAAAACCGAATCAGGAAAATGTGATGAAAAGGATCAAGAGGATAAACCGTTTGCCATGGTTAAAATTGATAATAAGCAATGGCAGTGTGATGTTTGTCGAAAATGTTTTACTACAAAATATTTTCTAAAGAAACATAAGCGTCTCCATACAGGAGAAACTCCGTACGCTTGCACCCAATGCAACAAAACATTTACGTTCCAACAATCATATCATAAACATCTTCTATATCATAATGATGAAAAGCCTCATATATGCAACTACTGTGGTCGAGCTTTTAAAGAACTATCAACGTTACACAATCATCAGCGAATACACACTGGGGAAAAACCGTTTTCATGTGAAACTTGTGGTAAATGTTTTCGTCAAAGAGTCTCATATTTAGTGCACAGGAGAATCCACACCGGCGTTATGCCTTACAAATGTACGGCGTGTGAAAAAAGCTTTCGGTACAAGGTTTCACAAAGAACACACAAGTGTCAGGCTCAACCGCCAGGAACTGTTGTGCGCCAAGTGGGTAATCTTGTTGAAAAACTTAAAAAGAAATGTGCAGATTCTTCGACATCAAACGACAAGGAAGAGCGAAGTAATCATGATAATTACTTTAGAGAAGTTTCAAAAGCAAACGCTGAACTAGTTCTCAGCGGTGCTAAACTATCTTTAGATGATATGGAAGCTGACAATTTTAATCTCATCAATGACACATTCAACCGAAACGTGCCTGAACAAATTACAGAATTAAAGAGTCCGACTCAAATGACGAAAAACAATAAAATCGCACCTTGCTTGGATTCCAACTTAGAGGAGTTAATGGACAGTATTCCTCTTGTAGACAAAAACATGCCATCACCATCCGAAATCTTAAAAAAATTATGTCTTTCCAAAGATGAAGATTACTCGCTGTCACCAGATAAAACATGTGAAAACGACTTCGAGATTTATAAAGATATTGATAAATATTTATGA

Protein

MSANVASFPCPVCTLSGVFFTAQSLRDRLIQVSTNKILCPVCQEEIIGLDKLTIHLFSHVKLLAANENVDKDRVSDVKIIPKKKHDLVLPQKKPKPSTSKNKPQPSTVNTPVKFVKIYPKFPVISLNTLPIIDISQLSSKDCIQQREKVFVKAESAVLQANTACNICGLQFVDENILKVHRCLIHNIDDDANSTITTYQCHLCPKKFKMRGSLMVHLRVAHFGFSAGNKKCPAEKTESGKCDEKDQEDKPFAMVKIDNKQWQCDVCRKCFTTKYFLKKHKRLHTGETPYACTQCNKTFTFQQSYHKHLLYHNDEKPHICNYCGRAFKELSTLHNHQRIHTGEKPFSCETCGKCFRQRVSYLVHRRIHTGVMPYKCTACEKSFRYKVSQRTHKCQAQPPGTVVRQVGNLVEKLKKKCADSSTSNDKEERSNHDNYFREVSKANAELVLSGAKLSLDDMEADNFNLINDTFNRNVPEQITELKSPTQMTKNNKIAPCLDSNLEELMDSIPLVDKNMPSPSEILKKLCLSKDEDYSLSPDKTCENDFEIYKDIDKYL

Uniprot

A0A2A4JYL7 A0A2H1V664 A0A3S2LCX7 A0A212EL54 A0A194PKE3 A0A194R894 + More
A0A0L7L5M3 A0A336LGT9 A0A336LHU7 A0A1B0CYR2 A0A182QCN5 A0A0M4F2P2 A0A0A9W6I9 A0A0K8TK27

Pubmed

22118469 26354079 26227816 25401762

EMBL

NWSH01000352 PCG77117.1 ODYU01000879 SOQ36307.1 RSAL01000223 RVE43995.1 + More
AGBW02014138 OWR42201.1 KQ459602 KPI93478.1 KQ460615 KPJ13724.1 JTDY01002775 KOB70752.1 UFQT01000004 SSX17184.1 SSX17185.1 AJVK01020326 AJVK01020327 AXCN02001517 CP012526 ALC45382.1 GBHO01040583 JAG03021.1 GBRD01000096 JAG65725.1

Proteomes

UP000218220 UP000283053 UP000007151 UP000053268 UP000053240 UP000037510 + More
UP000092462 UP000075886 UP000092553

Pfam

PF00096 zf-C2H2

Interpro

IPR036236 Znf_C2H2_sf + More
IPR013087 Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A2A4JYL7 A0A2H1V664 A0A3S2LCX7 A0A212EL54 A0A194PKE3 A0A194R894 + More
A0A0L7L5M3 A0A336LGT9 A0A336LHU7 A0A1B0CYR2 A0A182QCN5 A0A0M4F2P2 A0A0A9W6I9 A0A0K8TK27

PDB

2I13 E-value=1.67735e-28, Score=315

KEGG

101736433 no KO assigned | (RefSeq) zinc finger protein 528

GO

GO:0003676 GO:0016021 GO:0046872 GO:0032259 GO:0019205 GO:0005739 GO:0016776 GO:0006811 GO:0016020 GO:0016876 GO:0043039

Length:

554

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.05528

Exp number, first 60 AAs:

1.05385

Total prob of N-in:

0.05461

outside

1 - 554

Pi

267.013747

Theta

203.768547

Tajima's D

1.26529

CLR

0.08474

CSRT

0.729763511824409

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics