SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09119  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007564
Annotation
PREDICTED:_oxygen_resistance_gene_1_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.206
 

Sequence

CDS
ATGAGTGGTGAACCGACACTGACGGAGTCTCCGGTGCCGGTGGCTCTGGCCCGTCTGCAGGGTCGGCCTGGGCGCTACCAGCGTGGCTTGCGCAACCATCGTCCCAGCCTTCAACTCGCCAGCTTACAGGAAGCCATAGATGAAAGTCCTCGACGATTTAGTGACGAAACGTTTATACCTGACACAGACGATGATGAAGCGTACAACGATGGCCCAATTGAGGAGACTCCGACTCGACCTGTCGTTAATGGACGCAGATCTTCGGACGCTACTTTTGCCGAAAGATACAGACAATTATCCGACTTTGACGAGCCGCCGCCCGAGGTACCGCGCAGGGCTTCCCTCGCCGTGCCTGTCGCCAACGAGAGATACAGTCACGCCGATAAGGGGCGCCGGCGCTCGTGGGCCGCACGTTTGCAACTCGAACGTAAGAAAAGGCGAAAATCTGGAGGAAACGACACTGACGACGAGAGCGAAACACCGACATACGTTCGTCAAAAACGACTATCGTGGTGGAACGTGTTTGTACCCGATAACATGCTGAAGAACAGGTCTAGGCGCGCTTCGCAGCAACTGTCGAGAAGCGCCGAGAGTATCGACCAGTCCTTCAAGAGGTCGAAAAGTCGTTCAGTAGATCATGGATTCTCCCCGCCATTCGACTTGGAATCTCTGCGGTCTAAAGTCGAAGGCAGATTCGACGCAGTGCATAGAGATGAAGACGACCAAGCTAAGAGGCTACCGCCCCCACCTCCAATCAAGACGATGACATACACGGTTCGCGACAGGGATACGCTGACGTCACTGGCTGCGAGGTTCGACACGACCCCGTCTGAACTGACCAAGCTGAATAGGCTCGCGACACAGTTCATCTTTCCCGGACAGACTTTACTCGTACCGGACAAAAGAAAAGATGGCGACAAGGAATCGGATGGTCCCTCCGAGAGCGGAGACAACACTTCGGAGTCCACGCAGGGTCCTGCCAGTGAACCTGCACAGGAAAAAGAGATTTTGGACAGCCTCCGGCCCGTGTCTCCGGAAGCTCCCACGAGCAGCAGCGGCCCACAACGGTTCCTGAAGATTAACGTGCGTCACATCACTGATGGACAGGGTGTTGTATCGGGCGTGTTGCTGGTGACGCCGAACGCGGTGATGTTCGACCCGAACGTGTCCGACACGCTGGTCATGGAGCACGGGCCCGAGTCGTACGGCGTCATCGCGCCGATGGAGTACGTCGTCAACGCAGCGATATTCTACGACATCGCGCACATGCGCACGCACGGACCGGACCGCAACACGCACAAGGCTGAACAAGCTGAAATATATTATATGAATAAAGCAGATCTTTCCCCTGGAAAGGATTCTCTACTAGTCAAAGACGAAACGTTCCCAGAGCTGCAGGCGGCTGGTGCTGAAGGCGAGGAGCGTCCCGTGTCGCCCGACGCTGAGGATCGTGGGGGTGCCGCCTTCCCCAAGGCCTTCGAGAGGGAACTCGTCACTCCCACCGCTTTACAGCAACAAACGACCGAGGAGAGACGAAAATCTTTACTGGACCATCACTGGGCCATTCCGAGCAAAGACAGAATGTCCATCGATCAGGGCAGTGAGGTGTCTTCGAGCGCCTCCCAGTGCAAGGAGGAGAGCCTGGAGGCTTCTCGTGAACGTGCCGACAGCTCGGAGGGCGGCGACGGCTCCGAGGACGCGCCCGCCGACGACGCCCACCACCTCGTCAAGCTCTCCTACCACGACTCCGGCATCGACATACGCGACCCGCTTCTTCACGTCACGCCCAACAACACTAAAAAGGTGTACAGCGATGCGGATATCGTACTGTCTGCGGACTGGGTGCCGCCGGTGTGCGTGTCGCGCGCCGAGCCGCCGCTGTCGGCGCCGCCGCTCGGGGAGAACGAGAGGGCGCCGCGGAAGTCTACCGTTTCTTTCTCGCTTGACGGACAACAGCAGAAGGACGACGCCGCTAAACCTGATAAAAAGAATAAGATGCTGAAGAGGCTCTCCTACCCTCTGTCGTGGGTGGAGGGCCTGACTGGCGAGGTGGCGTCCGGCACGCAGGGCTCGCAAAGTGACTCTCTGCCCACTTCGGCCGACAGTCACAACTCAACAAGCGTCTTTTCGAAAGTATTCAACAGGCGCAGTTCGTTGGGTGGGTTTGGGCGTTCTCAAGCCAAGACCTCAACGAGCTCGATGCAGCCGCGCCTCGACTATCGCAGCATGGTCTCCGTGGATGACATGCCTGACCTTTTCGCCTCATTCGACAAGCTAATACCCAGACCGGCGCGTCCCAGCGACGATCCCCCGCTGTACCTGCGGCTCCGCATGGGCAAGCCGGCCGGCCGCCCGCTGCCGCGCACCACGCCGCTCATGTCGTACGGACGGAAACGGATGAAGCCGGAATACTGGTTCGGAATCCCACGCAATCGCGTCGACGACCTATTCAAGTTCCTAACTCACTGGGTACCGGACCGGTACGGGCCCCTCGGTGACGTCACCGCTCAGGGCTACGAGCTCATCGATAGCGACACCGAGTGGGACGACGACGACCCCAAGCCTGGCAATAAGGACGATCGCGCCAGCAGCAACGACGACGTGTCTGACATCACGCGCGAGTCATGGGAGGTATTGTCGATGAGCGATGAGCTCCGACGCGCGCTTTACTCGTCGGGGGCCTCCGTCGACATGGAGTTCTTGCCGCCCGACCTCATTGGCGCCACGGAAATATTCACCATGGAACACAGGGAGAAGTTGTGCAGCGTGCTACCGGCTCGCGCTCAGGGGTACATGTGGTCGCTCGCGTTCAGCACCAGCCAGCACGGGTTCTCGCTCGCGTCCATGTACCGCAAGATGCAGCGCGTCGACAGCCCCGTGCTCCTCGTCATACAGGATACCGATAACAACGTGTTTGGGGCCATGACGTCGTGTGCTCTACATCCGTCTGAACATTTCTACGGTACTGGCGAATCGTTCCTCTATTCGTTTCAAAGGATTGAGGAAGACACGAGCCCGGGGGCTCACGGCCCGGTCCACGCCGACGACGCGAACAAAGAAACAGATTCAGATAATCAAAGCGACGCCAAAAAGGAAGACAACGAACAATCGCAAACGGTCAAAACTAAATTCAAGTACTGGGGATGGACGGGAGACAACATGTATTTCATTCGTGGGAGCAACGACAATATATCGATCGGCGCTGGCGATGGAAAATTCGGTCTGTGGCTGGACGGAGACCTGTACTTGGGGCGCACGCAACGGTGCAAGACGTACGGTAACGAGCCGCTGACGACGCGAGAGGACTTCATCGTGAAGATCATGGAGTGCTGGACCTTCATCTGA
Protein
MSGEPTLTESPVPVALARLQGRPGRYQRGLRNHRPSLQLASLQEAIDESPRRFSDETFIPDTDDDEAYNDGPIEETPTRPVVNGRRSSDATFAERYRQLSDFDEPPPEVPRRASLAVPVANERYSHADKGRRRSWAARLQLERKKRRKSGGNDTDDESETPTYVRQKRLSWWNVFVPDNMLKNRSRRASQQLSRSAESIDQSFKRSKSRSVDHGFSPPFDLESLRSKVEGRFDAVHRDEDDQAKRLPPPPPIKTMTYTVRDRDTLTSLAARFDTTPSELTKLNRLATQFIFPGQTLLVPDKRKDGDKESDGPSESGDNTSESTQGPASEPAQEKEILDSLRPVSPEAPTSSSGPQRFLKINVRHITDGQGVVSGVLLVTPNAVMFDPNVSDTLVMEHGPESYGVIAPMEYVVNAAIFYDIAHMRTHGPDRNTHKAEQAEIYYMNKADLSPGKDSLLVKDETFPELQAAGAEGEERPVSPDAEDRGGAAFPKAFERELVTPTALQQQTTEERRKSLLDHHWAIPSKDRMSIDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSGIDIRDPLLHVTPNNTKKVYSDADIVLSADWVPPVCVSRAEPPLSAPPLGENERAPRKSTVSFSLDGQQQKDDAAKPDKKNKMLKRLSYPLSWVEGLTGEVASGTQGSQSDSLPTSADSHNSTSVFSKVFNRRSSLGGFGRSQAKTSTSSMQPRLDYRSMVSVDDMPDLFASFDKLIPRPARPSDDPPLYLRLRMGKPAGRPLPRTTPLMSYGRKRMKPEYWFGIPRNRVDDLFKFLTHWVPDRYGPLGDVTAQGYELIDSDTEWDDDDPKPGNKDDRASSNDDVSDITRESWEVLSMSDELRRALYSSGASVDMEFLPPDLIGATEIFTMEHREKLCSVLPARAQGYMWSLAFSTSQHGFSLASMYRKMQRVDSPVLLVIQDTDNNVFGAMTSCALHPSEHFYGTGESFLYSFQRIEEDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQTVKTKFKYWGWTGDNMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMECWTFI

Summary

EMBL
AB164063    BAH23575.1    RSAL01000065    RVE49442.1    KQ460615    KPJ13721.1    + More
AGBW02014138    OWR42207.1    GFDF01003044    JAV11040.1    GFDF01003045    JAV11039.1    KU240004    AND01111.1    KQ971343    EFA03143.2    CH477250    EAT46083.1    GFDF01003249    JAV10835.1    ADTU01017445    ADTU01017446    ADTU01017447    ADTU01017448    ADTU01017449    ADTU01017450    QOIP01000005    RLU22709.1    GEZM01086314    JAV59557.1    GBXI01014986    GBXI01013298    JAC99305.1    JAD00994.1    GBXI01006007    JAD08285.1    GAKP01013072    JAC45880.1    CM000160    KRK02677.1    KZ288305    PBC28774.1    GEDC01024119    GEDC01019313    JAS13179.1    JAS17985.1    KRK02688.1    KA645861    AFP60490.1    KRK02674.1    GGFJ01000572    MBW49713.1    GEZM01086313    JAV59558.1    GGFJ01000632    MBW49773.1    AF125384    AE014297    AAD28508.1    AAF52045.2    AAN13269.1    AAZ52515.1    GGFM01000176    MBW20927.1    GGFM01000178    MBW20929.1    KA646807    AFP61436.1    GGFL01000944    MBW65122.1    GGFL01000945    MBW65123.1    GGFK01000323    MBW33644.1    GGFK01000324    MBW33645.1    GGFL01003994    MBW68172.1    AAN13270.2    CH902617    KPU80797.1    CH933806    KRG01765.1    GEDC01024560    GEDC01010081    JAS12738.1    JAS27217.1    KPU80788.1    EDW95747.2    KRG01760.1    CM000070    KRT00806.1    GAKP01013071    JAC45881.1    KPU80793.1    KRT00803.1    KRG01767.1    CH964272    KRG00109.1    KPU80787.1    OUUW01000008    SPP84627.1    KRT00823.1    CH940652    EDW59680.2    KRK02695.1    KRK02692.1    KRG01759.1    KRF79008.1    KRK02689.1    KRK02691.1    KRG01770.1    KRF79001.1    KRK02700.1    KRT00819.1    KRF79006.1    ABI31139.1    AF125385    AAD28509.1    ABI31140.1    KPU80780.1    ACL83467.1    ACL83468.1    KPU80784.1    AY118658    AAM50027.1    AAN13276.2    KRK02701.1    KPU80785.1    KPU80779.1    EDW15863.2    KRT00820.1    NNAY01000893    OXU26038.1    KRK02682.1    EDW84752.2    KRG01771.1    EDV44348.2    KRT00810.1   
Pfam
PF07534   TLD        + More
PF01476   LysM
Interpro
IPR018392   LysM_dom        + More
IPR006571   TLDc_dom       
IPR036779   LysM_dom_sf       
Gene 3D
PDB
4ACJ     E-value=4.86879e-42,     Score=435

Ontologies

Topology

Length:
1114
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02186
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  1114
 
 

Population Genetic Test Statistics

Pi
244.46035
Theta
18.706213
Tajima's D
0.591457
CLR
0.885131
CSRT
0.548972551372431
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 KGILKVSPAPEDCTKD 100.00 5e-09
28556443 AVVPENTNATVPIQK 100.00 2e-04
26822097 IIIFQEIR 100.00 0.010
26280517 MKEIAIDFIAR 100.00 0.039
28556443 ASSNDDVSDITR 100.00 0.039
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