Gene

KWMTBOMO09117  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007566

Annotation

PREDICTED:_prenylated_Rab_acceptor_protein_1_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr15(-):11543149-11548310      View in EpiBrowser

Full name

PRA1 family protein      

Location in the cell

PlasmaMembrane   Reliability : 4.745

CDS

ATGTCTGAAAATGTAAAGATTGATCTGTCAGGTGAAATAAACGCAACAACAGAAAAGAAAGGTTTCCAAAAGTTGTTGCAGCATGTACGTAGTGGTGCGGCTCCTGCATTGTTGATGGGAGTTTTATCTTCACGCAGGCCATGGACACAATTTGTTGCCACTGACAACTTTAAGGTACCAGTATCTATACCAAGATTGTCTCGAAGATTCTATCGTAACATAGAATATTTTCAAGCTAATTACCTAATTGTATTTCTGGGACTATTTGCCTATTGCCTCATAACATCACCACTGTTGCTGATCACTATGGTGGCCAGTTTCTTTGGATATAGAAAATTAACTTCAGGGCCGAATACTTGGAAGATTGGTGGTTGGGAGTTAACGAAAACACAGCAGTATGTTATAGCTGCTGCCGGATCCATGGCACTCTGTTGGCTTGCTGGAGCTGGAGCCGTTTTATTCTGGGTTTTAGGTGCAACGGTAACCGTAGTCGCCCTTCATGCAAGCTTCTTCGATGCAGAGGCACTACCTAATCTTGAAGACCCGGAGCAGTTTCCGATGATTGAGCAAGTGTGA

Protein

MSENVKIDLSGEINATTEKKGFQKLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPLLLITMVASFFGYRKLTSGPNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLEDPEQFPMIEQV

Similarity

Belongs to the PRA1 family.

Uniprot

A0A2A4JJY5   A0A2A4JKY1   A0A2H1VMU1   A0A1E1WPF5   A0A194RCT2   A0A194PKD3   + More
A0A437BGA1   S4P9K8   V5GF64   A0A1Y1K4D3   A0A2P8Z497   A0A067RIM0   A0A1W4XME8   A0A1A9WP35   A0A2J7Q588   A0A034WK12   A0A0K8TZ36   A0A1Q3FKD3   A0A182QGQ3   A0A182JIB3   D2A449   A0A1L8EE76   B0WR48   A0A182P401   A0A084VEN4   A0A182RBA1   A0A023EJD0   A0A182W111   A0A182URF4   A0A182U131   A0A182WVJ3   Q5TT69   Q1HQQ3   A0A182MF79   A0A1L8DUX5   A0A182I972   A0A182YG41   A0A182K0V2   A0A336L0L8   A0A1I8PIG9   A0A1B0D3Z2   A0A1B6CTJ3   A0A336ME42   A0A182NCH2   T1E285   T1PDJ0   A0A2M3ZKX3   A0A2M3Z2E7   A0A2M4C044   W5JG84   A0A2M4A4Z3   A0A182F9K9   A0A2M4C0Q4   A0A0L0CE71   A0A3R7MAW9   A0A1B0AKK1   A0A1B0A9A8   A0A1A9UIY1   D3TMZ2   A0A0M5IXW8   A0A1D2MZY3   E0VSW2   A0A1B0CPX4   B4MRI4   U5EJZ4   B4J9H2   B4KNT6   A0A131XXD3   B3MF38   B7PPW4   A0A0J9R986   B4HMA6   B4QHU3   A1Z823   A0A1B0CQN0   A0A0K8RI51   Q8I1H0   A0A1B6E3I8   B4LJX1   B4NX22   A0A131XFI4   A0A0P4WE99   A0A1W4UZ28   L7M347   A0A224YWC8   A0A131Z3S8   A0A0N0BGF1   A0A0C9SBA7   E6PBW4   A0A444TH27   G3MK76   A0A226D4N5   R4FM62   A0A2G8KWF2   A0A023G6B3   A0A3B0J4Q5   A0A0B8RQM5  

Pubmed

26354079    23622113    28004739    29403074    24845553    25348373    + More
18362917    19820115    24438588    24945155    12364791    14747013    17210077    17204158    17510324    25244985    24330624    25315136    20920257    23761445    26108605    20353571    27289101    20566863    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18057021    17550304    28049606    25576852    28797301    26830274    26131772    22216098    29023486    25476704   

EMBL

NWSH01001151    PCG72377.1    PCG72378.1    ODYU01003413    SOQ42149.1    GDQN01003679    + More
GDQN01002196    JAT87375.1    JAT88858.1    KQ460615    KPJ13716.1    KQ459602    KPI93468.1    RSAL01000065    RVE49439.1    GAIX01003714    JAA88846.1    GALX01005852    JAB62614.1    GEZM01093128    JAV56334.1    PYGN01000202    PSN51324.1    KK852658    KDR19145.1    NEVH01017591    PNF23740.1    GAKP01004482    JAC54470.1    GDHF01032600    JAI19714.1    GFDL01006985    JAV28060.1    AXCN02001187    KQ971348    EFA04845.1    GFDG01001787    JAV17012.1    DS232051    EDS33154.1    ATLV01012285    KE524778    KFB36428.1    GAPW01004664    JAC08934.1    AAAB01008888    EAL40611.2    DQ440391    CH477693    ABF18424.1    EAT37197.1    AXCM01000042    GFDF01003846    JAV10238.1    APCN01003212    UFQS01001411    UFQT01001411    SSX10746.1    SSX30428.1    AJVK01023821    GEDC01020643    JAS16655.1    UFQS01001048    UFQT01001048    SSX08700.1    SSX28614.1    GALA01001445    JAA93407.1    KA646200    AFP60829.1    GGFM01008430    MBW29181.1    GGFM01001935    MBW22686.1    GGFJ01009556    MBW58697.1    ADMH02001608    ETN61824.1    GGFK01002546    MBW35867.1    GGFJ01009744    MBW58885.1    JRES01000505    KNC30541.1    QCYY01001600    ROT76863.1    JXJN01025954    CCAG010011323    EZ422794    ADD19070.1    CP012524    ALC42144.1    LJIJ01000340    ODM98596.1    DS235758    EEB16468.1    AJWK01022757    CH963850    EDW74723.1    GANO01002011    JAB57860.1    CH916367    EDW01453.1    CH933808    EDW08981.1    GEFM01003882    JAP71914.1    CH902619    EDV37666.1    ABJB010403120    ABJB010413655    DS761162    EEC08636.1    CM002911    KMY92627.1    CH480816    EDW47183.1    CM000362    EDX06427.1    KMY92626.1    AE013599    BT133477    AAF58869.1    AFH97167.1    AJWK01023776    GADI01003644    JAA70164.1    AY190939    CH954177    AAO01006.1    EDV58180.1    GEDC01004839    JAS32459.1    CH940648    EDW61625.1    CM000157    EDW89583.1    GEFH01004120    JAP64461.1    GDRN01077276    JAI62762.1    GACK01007520    JAA57514.1    GFPF01010772    MAA21918.1    GEDV01003152    JAP85405.1    KQ435789    KOX74464.1    GBZX01002083    JAG90657.1    BT125850    ADT78486.1    SAUD01002758    RXG69287.1    JO842277    AEO33894.1    LNIX01000033    OXA40502.1    ACPB03001854    GAHY01001844    JAA75666.1    MRZV01000333    PIK52337.1    GBBM01005652    JAC29766.1    OUUW01000001    SPP74533.1    GBSH01002066    JAG66960.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000283053    UP000245037    UP000027135    + More
UP000192223    UP000091820    UP000235965    UP000075886    UP000075880    UP000007266    UP000002320    UP000075885    UP000030765    UP000075900    UP000075920    UP000075903    UP000075902    UP000076407    UP000007062    UP000008820    UP000075883    UP000075840    UP000076408    UP000075881    UP000095300    UP000092462    UP000075884    UP000095301    UP000000673    UP000069272    UP000037069    UP000283509    UP000092460    UP000092445    UP000078200    UP000092444    UP000092553    UP000094527    UP000009046    UP000092461    UP000007798    UP000001070    UP000009192    UP000007801    UP000001555    UP000001292    UP000000304    UP000000803    UP000008711    UP000008792    UP000002282    UP000192221    UP000053105    UP000288706    UP000198287    UP000015103    UP000230750    UP000268350   

PRIDE

B7PPW4    A1Z823    L7M347   

Pfam

PF03208   PRA1

Interpro

IPR004895   Prenylated_rab_accept_PRA1       

ProteinModelPortal

A0A2A4JJY5   A0A2A4JKY1   A0A2H1VMU1   A0A1E1WPF5   A0A194RCT2   A0A194PKD3   + More
A0A437BGA1   S4P9K8   V5GF64   A0A1Y1K4D3   A0A2P8Z497   A0A067RIM0   A0A1W4XME8   A0A1A9WP35   A0A2J7Q588   A0A034WK12   A0A0K8TZ36   A0A1Q3FKD3   A0A182QGQ3   A0A182JIB3   D2A449   A0A1L8EE76   B0WR48   A0A182P401   A0A084VEN4   A0A182RBA1   A0A023EJD0   A0A182W111   A0A182URF4   A0A182U131   A0A182WVJ3   Q5TT69   Q1HQQ3   A0A182MF79   A0A1L8DUX5   A0A182I972   A0A182YG41   A0A182K0V2   A0A336L0L8   A0A1I8PIG9   A0A1B0D3Z2   A0A1B6CTJ3   A0A336ME42   A0A182NCH2   T1E285   T1PDJ0   A0A2M3ZKX3   A0A2M3Z2E7   A0A2M4C044   W5JG84   A0A2M4A4Z3   A0A182F9K9   A0A2M4C0Q4   A0A0L0CE71   A0A3R7MAW9   A0A1B0AKK1   A0A1B0A9A8   A0A1A9UIY1   D3TMZ2   A0A0M5IXW8   A0A1D2MZY3   E0VSW2   A0A1B0CPX4   B4MRI4   U5EJZ4   B4J9H2   B4KNT6   A0A131XXD3   B3MF38   B7PPW4   A0A0J9R986   B4HMA6   B4QHU3   A1Z823   A0A1B0CQN0   A0A0K8RI51   Q8I1H0   A0A1B6E3I8   B4LJX1   B4NX22   A0A131XFI4   A0A0P4WE99   A0A1W4UZ28   L7M347   A0A224YWC8   A0A131Z3S8   A0A0N0BGF1   A0A0C9SBA7   E6PBW4   A0A444TH27   G3MK76   A0A226D4N5   R4FM62   A0A2G8KWF2   A0A023G6B3   A0A3B0J4Q5   A0A0B8RQM5  

KEGG

101739726    K20359 PRA1 family protein 1 | (RefSeq) prenylated Rab acceptor protein 1

GO

GO:0016021   GO:0016740  

PANTHER

PTHR19317  

Subcellular location

Membrane  

Length:

191

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

48.54989

Exp number, first 60 AAs:

0.28006

Total prob of N-in:

0.86825

inside

1  -  81

TMhelix

82  -  104

outside

105  -  134

TMhelix

135  -  157

inside

158  -  191

 

 

Pi

31.947334

Theta

142.503697

Tajima's D

-1.718059

CLR

2165.095909

CSRT

0.0352482375881206

Interpretation

Uncertain