Gene

KWMTBOMO09108

Pre Gene Modal

BGIBMGA007529

Annotation

PREDICTED:_follicle_cell_protein_3C-1_[Amyelois_transitella]

Location

Bomo_Chr15(+):11309679-11312207      View in EpiBrowser

Full name

Follicle cell protein 3C-1      

Location in the cell

Extracellular   Reliability : 3.573

CDS

ATGCAAAGTGGCAAGGGTCTGGTAATTCTGGCTGCGTGTTTGTGTTTGGTGATGACTGAAGCTAGAAGGAAACTCAAGAGACATGACATAGAAGAAGAGAAATCCACCGAAGAATTCGACGAAGAGTACGATGATGTCGAGCCGTGTCAGTGTGGGGTGTTCATGTCCCAGCAAGTGGGCGTCAAAGAAGGTCGACGCGGTAGACCTCGGGGCCCACCTCAAGGAGAGCCTGTCGTCACTTATGATACTGATTCACCCAGTCTACCCTGTGGCTCGGGTGGCTTCAAGCATTGTATCAGTACGTGCCTTGATGTAATTTTGAAGTATCTTCCCAAAGCGGGTCCAGTTATCTGCGGAGCTGTAGAACGCGATGTCAATAGGGAAAAGGCCTTCTTGTTTGTGAAAAACTGTGGCGGCGACTGGATTCCCACTAGCTTTTCTGCCGGCAAAGAATTCTGCTGCACTAACGGAGAACATCACAAATGCTAA

Protein

MQSGKGLVILAACLCLVMTEARRKLKRHDIEEEKSTEEFDEEYDDVEPCQCGVFMSQQVGVKEGRRGRPRGPPQGEPVVTYDTDSPSLPCGSGGFKHCISTCLDVILKYLPKAGPVICGAVERDVNREKAFLFVKNCGGDWIPTSFSAGKEFCCTNGEHHKC

Similarity

Belongs to the peptidase S1 family.

Keywords

Alternative splicing   Complete proteome   Polymorphism   Reference proteome  

Feature

chain  Follicle cell protein 3C-1
splice variant  In isoform B.

Uniprot

H9JDD2   S4NZQ7   A0A2A4K2W4   A0A212EXQ8   A0A0L7LEC9   A0A194PKC2   + More
A0A437BGD9   A0A2S2P482   T1HD51   J9JNM8   A0A232EYX7   A0A2J7R153   A0A067RWY4   E0VBX5   A0A154PHB1   K7IVT3   U4TYN3   N6TA73   A0A0A9WGN2   A0A2P1EGA5   A0A146LGV3   A0A2S2R8J5   A0A336MK61   A0A1B0CEB1   C4PLE7   A0A3Q0IVM9   A0A182GHR7   B0WRL6   A0A0N0BI17   A0A1I8NMF1   A0A1I8NMF0   A0A0L7QMB9   Q0IFW8   T1DH69   W5JPU8   A0A1B6L8X8   A0A2M4C0V6   A0A1B6J0B3   B4R3W8   B4MJA2   A0A0L0C0P7   A0A034WRT4   Q32UU4   D6WNT3   B3NU00   B4IA27   P11450-2   B4Q0L5   Q29HP0   A0A1J1IKD7   C4XVH9   P11450   B4GYL9   A0A1W4VEZ2   A0A3B0K2M0   B4MCT4   B3N1W1   A0A182F7R0   B4JMT3   A0A1A9VB23   B4L8B1   A0A1B0FGU5   A0A1B0A9Y1   A0A1W4WZL4   A0A1A9Y2W2  

Pubmed

19121390    23622113    22118469    26227816    26354079    28648823    + More
24845553    20566863    20075255    23537049    25401762    26823975    19405973    26483478    17510324    20920257    23761445    17994087    26108605    25348373    16020794    18362917    19820115    3119397    10731132    12537572    10731137    17550304    15632085   

EMBL

BABH01030108    GAIX01007984    JAA84576.1    NWSH01000191    PCG78587.1    AGBW02011710    + More
OWR46251.1    JTDY01001487    KOB73750.1    KQ459602    KPI93458.1    RSAL01000065    RVE49431.1    GGMR01011533    MBY24152.1    ACPB03004624    ABLF02027643    NNAY01001575    OXU23543.1    NEVH01008214    PNF34555.1    KK852413    KDR24414.1    DS235044    EEB10881.1    KQ434905    KZC11245.1    KB631852    ERL86739.1    APGK01037823    APGK01037824    KB740949    ENN77164.1    GBHO01037961    JAG05643.1    MF100770    AVL92586.1    GDHC01011288    JAQ07341.1    GGMS01017071    MBY86274.1    UFQS01001167    UFQT01001167    SSX09331.1    SSX29233.1    AJWK01008716    AJWK01008717    FM253348    CAR94538.1    JXUM01064415    KQ562297    KXJ76208.1    DS232057    EDS33416.1    KQ435736    KOX77012.1    KQ414894    KOC59694.1    CH477286    EAT44732.1    GAMD01002481    JAA99109.1    ADMH02000505    ETN66161.1    GEBQ01027687    GEBQ01019815    JAT12290.1    JAT20162.1    GGFJ01009784    MBW58925.1    GECU01015085    JAS92621.1    CM000366    EDX16980.1    CH963738    EDW72191.1    JRES01001065    KNC25868.1    GAKP01002474    JAC56478.1    AY795938    AAY27539.1    KQ971342    EFA03731.2    CH954180    EDV45708.1    CH480825    EDW44058.1    M18281    AY795911    AY795912    AY795914    AY795913    AY795915    AY795916    AY795917    AY795918    AY795919    AY795920    AY795921    AY795922    AY795923    AY795924    AY795925    AY795926    AY795927    AY795928    AY795929    AY795930    AY795931    AY795932    AY795933    AY795934    AY795935    AY795936    AY795937    AE014298    AL035395    BT025893    CM000162    EDX01299.1    CH379064    EAL31718.3    CVRI01000051    CRK99542.1    BT088783    ACS12716.1    CH479197    EDW27875.1    OUUW01000015    SPP88535.1    CH940660    EDW58006.2    CH902663    EDV30002.1    CH916371    EDV92026.1    CH933814    EDW05686.1    CCAG010020401   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053268    UP000283053    + More
UP000015103    UP000007819    UP000215335    UP000235965    UP000027135    UP000009046    UP000076502    UP000002358    UP000030742    UP000019118    UP000092461    UP000079169    UP000069940    UP000249989    UP000002320    UP000053105    UP000095300    UP000053825    UP000008820    UP000000673    UP000000304    UP000007798    UP000037069    UP000007266    UP000008711    UP000001292    UP000000803    UP000002282    UP000001819    UP000183832    UP000008744    UP000192221    UP000268350    UP000008792    UP000007801    UP000069272    UP000001070    UP000078200    UP000009192    UP000092444    UP000092445    UP000192223    UP000092443   

PRIDE

H9JDD2    P11450   

Pfam

PF00514   Arm        + More
PF01575   MaoC_dehydratas
PF00069   Pkinase
PF01395   PBP_GOBP
PF00089   Trypsin
PF16030   GD_N
PF05793   TFIIF_alpha

Interpro

IPR016024   ARM-type_fold        + More
IPR000225   Armadillo       
IPR029069   HotDog_dom_sf       
IPR011989   ARM-like       
IPR002539   MaoC-like_dom       
IPR000719   Prot_kinase_dom       
IPR017441   Protein_kinase_ATP_BS       
IPR011009   Kinase-like_dom_sf       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR036388   WH-like_DNA-bd_sf       
IPR011039   TFIIF_interaction       
IPR006170   PBP/GOBP       
IPR036390   WH_DNA-bd_sf       
IPR031986   GD_N       
IPR008851   TFIIF-alpha       
IPR036728   PBP_GOBP_sf       

SUPFAM

SSF48371   SSF48371        + More
SSF54637   SSF54637       
SSF56112   SSF56112       
SSF46785   SSF46785       
SSF50916   SSF50916       
SSF47565   SSF47565       
SSF50494   SSF50494       

Gene 3D

1.25.10.10     1.10.10.10     1.10.238.20    

CDD

cd00190  Tryp_SPc

ProteinModelPortal

H9JDD2   S4NZQ7   A0A2A4K2W4   A0A212EXQ8   A0A0L7LEC9   A0A194PKC2   + More
A0A437BGD9   A0A2S2P482   T1HD51   J9JNM8   A0A232EYX7   A0A2J7R153   A0A067RWY4   E0VBX5   A0A154PHB1   K7IVT3   U4TYN3   N6TA73   A0A0A9WGN2   A0A2P1EGA5   A0A146LGV3   A0A2S2R8J5   A0A336MK61   A0A1B0CEB1   C4PLE7   A0A3Q0IVM9   A0A182GHR7   B0WRL6   A0A0N0BI17   A0A1I8NMF1   A0A1I8NMF0   A0A0L7QMB9   Q0IFW8   T1DH69   W5JPU8   A0A1B6L8X8   A0A2M4C0V6   A0A1B6J0B3   B4R3W8   B4MJA2   A0A0L0C0P7   A0A034WRT4   Q32UU4   D6WNT3   B3NU00   B4IA27   P11450-2   B4Q0L5   Q29HP0   A0A1J1IKD7   C4XVH9   P11450   B4GYL9   A0A1W4VEZ2   A0A3B0K2M0   B4MCT4   B3N1W1   A0A182F7R0   B4JMT3   A0A1A9VB23   B4L8B1   A0A1B0FGU5   A0A1B0A9Y1   A0A1W4WZL4   A0A1A9Y2W2  

KEGG

101741055    no KO assigned | (RefSeq) follicle cell protein 3C-1

GO

GO:0004672   GO:0005524   GO:0016021   GO:0006367   GO:0005549   GO:0005634   GO:0032968   GO:0004252   GO:0003677  

SignalP

Position:   1 - 21,         Likelihood:  0.995425

 

 

Length:

162

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.31913

Exp number, first 60 AAs:

0.31854

Total prob of N-in:

0.05449

outside

1  -  162

 

 

Pi

228.455464

Theta

198.760199

Tajima's D

0.64854

CLR

1.099893

CSRT

0.55737213139343

Interpretation

Uncertain