SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09096  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007574
Annotation
PREDICTED:_GPALPP_motifs-containing_protein_1_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.755
 

Sequence

CDS
ATGATTTCTGATGAGTCCAGCAGTGATTCAGAAACAGGTAGATTTAAATGTCAAAAACCAAAGGATGAACAATCTCATCAAAGGGAAGATCGATACCGACCTACTGAAAGAAATAGGAATATAGAAAACAGATTTAACAGAGAATATGTTAAAAGAAGAGAGGAAGTTAGTCGATTTGATAGGAAAATACGAGACAAAGATAGACATCGAAGTACACGAATTTCACCTAAGAGAAGACATTCTAAAGAGAGAAGCCCTCCACGAAGGCGGTTAGATGACCCCCATCCTAAGGAAGAGAGGAGCCCCTACAGATCTCGTGAAAGATATAGACATGACAGAATCTCCAGACCTGATTCTAAGCCCAGAGATCATAGAAGTAGTAGTAAAGACAGGAAGAGAAGCTCTAGATCAAGATCACATAAATTAAATGAACGAAAGAGAGATTTGAAAGATGAAATTAGGCAAGCCATCACCCCTAAACCCAATAAACTGGAAAAGCAATCGAGAGAAAGCCTATCCTTGTCTCCTAATATTAAAGGAAAACGTTCTGAAGTCTATAAAGCTCCACCTACATCTCTGAAAAGAAAAAGTGATAGTCCAATTATAGTTGAAGACAATGATAGTGACAAATCAACTGAAGTTCAACCTGGATCCTACTATAGTATGATACCAGCTATAATTAAAGACAAAACAGAAGAGTCCAGTGAAATAGACTCCTCTGATGACGAGAAACTGAGAGCCAAACTCTTAAATTTAGAAAAGAAGCTGCATAAAACAAAAAAAAGAAAACACAAAAAGAGACATTCAAAAAAAAATTCAAAATCGCCAGAGCGAGAATTAGATAATCCAACATTGGCAGAAGTTACAAGCACCACAGATATCCAAAATAAAATACAGACTGAAGAACACACACACCTTGAGGAAGTTGCCATTGAGGTGACTTCTACTCAGAAAAGTACTAAAAAAGAGAGCAGTGAAGAAGGAGAAATATTTAGTGAAGATTCTCAAGAAATAGTGGACATTGATCCAATGGATTTAAGACACAAATTGCTTTCACTCAAAAGTACAACACAGAAAATGGATGTGTGCGGACCAGCTCTCCCACCACATTTGCAAGATCGGTACAGTAGTAAAAAATCTTCAGAAAAAGAAAAAACAGGAATCCAGACGTCTACTAACATGGGTCCTTCCATTCCTGACGACATGCGTAAAGTATTAGCTACAAGAGAAGTCATCAAATATGAAAGTTCCGATGAGGATTCCTGTGTTGGTCCTTTGCCAGTTGGTTCAGAACAGAAATATTCTGACGCCCACAAACGTCTGGAGGAGCGTGCTTTAGATATGAAACTTAAACAGATAGAAGGCCATTCGGTAACTAAAAAAGTTAAACACCGTGAACAATGGATGTTGGAACTTCCTGAAGCCAAGGCTAAATATTTAGGATTAGAAGCACGAAGCTTTAGAGCGAAACAAGGACCAGACATGACTGATAGGTCAAGTTGGACAGATAACCCCGAGGATAAAGCTAGAAAAGCAGCGGGTCAAGTTAAAGAAGAAGATGCAGCGTCTGCGTTGCAACGCGAGGCTAAGTCCCGACAAATAGAAACCAGGGACAAAGAACAGGAAGATGCTGTGAAAAAACATAAAAAGAAACACAAAAGGGAGGAAAGCTTACTAGAGCTACACCAGAAGAAGCTGAAGAAAAAGAAAAAGAAAGAGGAAAAAGAGGATGACAAGAAAGAGCGCCGGCCGTTCAGTCGCGACGTCGACTTGCAGGTGAACCGATTCGATGAAGCACAAAAGCGTTCGATCATCAAGAAAGCTCAAGACTTGAACAATAGATTTTCGAAGGGCGAAGCTAAATACTTATAA
Protein
MISDESSSDSETGRFKCQKPKDEQSHQREDRYRPTERNRNIENRFNREYVKRREEVSRFDRKIRDKDRHRSTRISPKRRHSKERSPPRRRLDDPHPKEERSPYRSRERYRHDRISRPDSKPRDHRSSSKDRKRSSRSRSHKLNERKRDLKDEIRQAITPKPNKLEKQSRESLSLSPNIKGKRSEVYKAPPTSLKRKSDSPIIVEDNDSDKSTEVQPGSYYSMIPAIIKDKTEESSEIDSSDDEKLRAKLLNLEKKLHKTKKRKHKKRHSKKNSKSPERELDNPTLAEVTSTTDIQNKIQTEEHTHLEEVAIEVTSTQKSTKKESSEEGEIFSEDSQEIVDIDPMDLRHKLLSLKSTTQKMDVCGPALPPHLQDRYSSKKSSEKEKTGIQTSTNMGPSIPDDMRKVLATREVIKYESSDEDSCVGPLPVGSEQKYSDAHKRLEERALDMKLKQIEGHSVTKKVKHREQWMLELPEAKAKYLGLEARSFRAKQGPDMTDRSSWTDNPEDKARKAAGQVKEEDAASALQREAKSRQIETRDKEQEDAVKKHKKKHKREESLLELHQKKLKKKKKKEEKEDDKKERRPFSRDVDLQVNRFDEAQKRSIIKKAQDLNNRFSKGEAKYL

Summary

Pfam
PF12572   DUF3752        + More
PF09139   Tam41_Mmp37
Interpro
IPR015222   Tam41        + More
IPR022226   DUF3752       

Ontologies

Topology

Length:
623
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00034
outside
1  -  623
 
 

Population Genetic Test Statistics

Pi
208.72756
Theta
211.969359
Tajima's D
0.858125
CLR
0.147331
CSRT
0.617919104044798
Interpretation
Uncertain
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