Gene

KWMTBOMO09088  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007515

Annotation

PREDICTED:_GRIP_and_coiled-coil_domain-containing_protein_2-like_[Bombyx_mori]

Location

Bomo_Chr15(+):11076019-11080427      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.302

CDS

ATGGGTTCAGAGTCAGCGCCGTCTCCTCCACCATCTAAACCGTTCACGGGCGGGGGCAGTGGTCGCTCCCCGGTCCCTCTGGAGCGACTGCTCGAGGAAGGAGTGCCCGATGATGAAGCGCTCGACACGTCTTCATTAGGCTTCACCCCAGAACAGGAGGTGGCCGATCTAAAAAGGCGTTTACAAGCTCAACAACAAAGAGTGAAGCACGTCACGGTGCTGCTATCGGAGTCTGAGCGAGAATGCGCGCGTATGGCTCAGCTCAGCGAACTCCTTAAGGCAGAGTTGCGTCGGGTGAGAGGGACCACGCAAAATGCACATAACACCGAGTACATGAAGAACGTCACTCTCAAGTTCCTAACCCTTCCATCCGGTGACGAGCGTATTCGACTTGTCCCAGTTCTTCAGAAGATTTTGACCTTGACGCCAGACGAAACTCAAAAAATTCAAGCGATTGCAAAAGGTTTAGATCCAAACTCGAGTAAAGGATGGGGAAGCTACTTGCCGTGGCCTGGAGGGAAATGA

Protein

MGSESAPSPPPSKPFTGGGSGRSPVPLERLLEEGVPDDEALDTSSLGFTPEQEVADLKRRLQAQQQRVKHVTVLLSESERECARMAQLSELLKAELRRVRGTTQNAHNTEYMKNVTLKFLTLPSGDERIRLVPVLQKILTLTPDETQKIQAIAKGLDPNSSKGWGSYLPWPGGK

Uniprot

H9JDB8   A0A2A4JZI8   A0A194PL30   A0A437BL54   A0A212EL07   A0A0K8TUK9   + More
W5JIZ8   A0A2M3ZJY1   D6WKQ2   A0A067R2L1   A0A182K560   A0A182F7Q9   A0A2M4A721   A0A2M4A637   A0A2J7QL96   A0A1A9VBD0   A0A1A9YG62   A0A1B0BT67   A0A1L8DW13   A0A2P8YTZ9   A0A182VFI1   A0A182UHY4   A0A1Q3FK61   Q5TT60   A0A182WVW7   A0A182HZ71   A0A1B0F9V4   A0A2J7QLC2   A0A182KXD9   A0A182R8C3   U4USN3   A0A182P0B9   A0A2J7QLA2   A0A2J7QL95   A0A1A9ZNU9   A0A182NSM2   A0A182MVY5   A0A182VS19   Q176W4   A0A1S4FD08   A0A1I8M2F1   A0A1A9WJE0   A0A1B6GJD1   A0A0T6AXM3   A0A1I8Q1P1   E0VFU3   A0A0K8T0I1   A0A084WRU9   A0A0A9YCF3   A0A1B6DFM6   A0A182GHS0   A0A0A9YJZ6   A0A336KMP6   A0A444TAY4   A0A1B6LE98   A0A2S2R5G5   R7UX32   B3P1H6   B4K5L7   A0A1Y1K9N7   A0A1Y1KEX4   A0A3B0K8Q0   A0A3B0KDX5   A0A3B0KL03   A0A0K8R2T9   A0A224XHK2   Q32KE8   Q9VGE4   A0A3Q0J439   A0A087U7U8   B3M033   A0A069DYE9   B4PN19   A0A0Q9X4H9   A0A1D2MV73   A0A1S3K777   A0A1W4UMQ1   V5GWQ1   T1J702   A0A2P2HYK8   B4JT77   W4XJE3   B4QTI0   B4HHI3  

Pubmed

19121390    26354079    22118469    26369729    20920257    23761445    + More
18362917    19820115    24845553    29403074    12364791    14747013    17210077    20966253    23537049    17510324    25315136    20566863    24438588    25401762    26483478    23254933    17994087    28004739    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26334808    17550304    27289101    25765539   

EMBL

BABH01030128    BABH01030129    BABH01030130    BABH01030131    BABH01030132    BABH01030133    + More
NWSH01000353    PCG77098.1    KQ459602    KPI93434.1    RSAL01000040    RVE50995.1    AGBW02014166    OWR42157.1    GDAI01000003    JAI17600.1    ADMH02001358    ETN62860.1    GGFM01008034    MBW28785.1    KQ971342    EFA03027.1    KK852751    KDR17156.1    GGFK01003107    MBW36428.1    GGFK01002946    MBW36267.1    NEVH01013250    PNF29355.1    JXJN01020019    GFDF01003453    JAV10631.1    PYGN01000359    PSN47728.1    GFDL01007055    JAV27990.1    AAAB01008888    EAL40582.4    APCN01005504    CCAG010002599    PNF29358.1    KB632348    ERL93186.1    PNF29357.1    PNF29356.1    AXCM01000837    CH477381    EAT42208.1    GECZ01007376    JAS62393.1    LJIG01022555    KRT79952.1    DS235124    EEB12249.1    GBRD01007116    JAG58705.1    ATLV01026212    ATLV01026213    ATLV01026214    ATLV01026215    KE525408    KFB52943.1    GBHO01013760    GBRD01007115    JAG29844.1    JAG58706.1    GEDC01012876    JAS24422.1    JXUM01064417    KQ562297    KXJ76211.1    GBHO01013759    JAG29845.1    UFQS01000679    UFQT01000679    SSX06136.1    SSX26492.1    SAUD01005646    RXG67132.1    GEBQ01017960    JAT22017.1    GGMS01016053    MBY85256.1    AMQN01005951    KB297182    ELU10899.1    CH954181    EDV49435.1    CH933806    EDW14054.1    GEZM01088477    JAV58179.1    GEZM01088478    JAV58175.1    OUUW01000008    SPP84480.1    SPP84479.1    SPP84478.1    GADI01008428    JAA65380.1    GFTR01008813    JAW07613.1    BT023931    ABB36435.1    AE014297    BT046132    AAF54739.3    ACI46520.1    KK118615    KFM73437.1    CH902617    EDV41990.1    GBGD01000077    JAC88812.1    CM000160    EDW97031.1    KRG00826.1    LJIJ01000479    ODM96997.1    GANP01009623    JAB74845.1    JH431901    IACF01001151    LAB66868.1    CH916373    EDV94967.1    AAGJ04051875    CM000364    EDX13285.1    CH480815    EDW42522.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000007151    UP000000673    + More
UP000007266    UP000027135    UP000075881    UP000069272    UP000235965    UP000078200    UP000092443    UP000092460    UP000245037    UP000075903    UP000075902    UP000007062    UP000076407    UP000075840    UP000092444    UP000075882    UP000075900    UP000030742    UP000075885    UP000092445    UP000075884    UP000075883    UP000075920    UP000008820    UP000095301    UP000091820    UP000095300    UP000009046    UP000030765    UP000069940    UP000249989    UP000288706    UP000014760    UP000008711    UP000009192    UP000268350    UP000000803    UP000079169    UP000054359    UP000007801    UP000002282    UP000094527    UP000085678    UP000192221    UP000001070    UP000007110    UP000000304    UP000001292   

PRIDE

H9JDB8    Q32KE8    Q9VGE4    V5GWQ1   

Pfam

PF01465   GRIP        + More
PF16704   Rab_bind

Interpro

IPR000237   GRIP_dom        + More
IPR032023   GCC2_Rab_bind       

ProteinModelPortal

H9JDB8   A0A2A4JZI8   A0A194PL30   A0A437BL54   A0A212EL07   A0A0K8TUK9   + More
W5JIZ8   A0A2M3ZJY1   D6WKQ2   A0A067R2L1   A0A182K560   A0A182F7Q9   A0A2M4A721   A0A2M4A637   A0A2J7QL96   A0A1A9VBD0   A0A1A9YG62   A0A1B0BT67   A0A1L8DW13   A0A2P8YTZ9   A0A182VFI1   A0A182UHY4   A0A1Q3FK61   Q5TT60   A0A182WVW7   A0A182HZ71   A0A1B0F9V4   A0A2J7QLC2   A0A182KXD9   A0A182R8C3   U4USN3   A0A182P0B9   A0A2J7QLA2   A0A2J7QL95   A0A1A9ZNU9   A0A182NSM2   A0A182MVY5   A0A182VS19   Q176W4   A0A1S4FD08   A0A1I8M2F1   A0A1A9WJE0   A0A1B6GJD1   A0A0T6AXM3   A0A1I8Q1P1   E0VFU3   A0A0K8T0I1   A0A084WRU9   A0A0A9YCF3   A0A1B6DFM6   A0A182GHS0   A0A0A9YJZ6   A0A336KMP6   A0A444TAY4   A0A1B6LE98   A0A2S2R5G5   R7UX32   B3P1H6   B4K5L7   A0A1Y1K9N7   A0A1Y1KEX4   A0A3B0K8Q0   A0A3B0KDX5   A0A3B0KL03   A0A0K8R2T9   A0A224XHK2   Q32KE8   Q9VGE4   A0A3Q0J439   A0A087U7U8   B3M033   A0A069DYE9   B4PN19   A0A0Q9X4H9   A0A1D2MV73   A0A1S3K777   A0A1W4UMQ1   V5GWQ1   T1J702   A0A2P2HYK8   B4JT77   W4XJE3   B4QTI0   B4HHI3  

KEGG

101737809    K20282 GRIP and coiled-coil domain-containing protein 2 | (RefSeq) GRIP and coiled-coil domain-conta

GO

GO:0031514   GO:0005737   GO:0005794   GO:0016021   GO:0017137   GO:0030306   GO:0000138   GO:0042802   GO:0042803   GO:0034067   GO:0048193   GO:0005829   GO:0042147   GO:0000042   GO:0005515   GO:0004672   GO:0006468   GO:0016579   GO:0010181   GO:0006811   GO:0016020   GO:0016876   GO:0043039  

Length:

174

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01626

outside

1  -  174

 

 

Pi

277.666416

Theta

206.972428

Tajima's D

1.180587

CLR

0

CSRT

0.702364881755912

Interpretation

Uncertain