Silkworm Genome Informatics Database

Gene

KWMTBOMO09082

Annotation

PREDICTED:_uncharacterized_protein_LOC106136903_[Amyelois_transitella]

Location

Bomo_Chr15(+):11018609-11021229 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.011 Nuclear Reliability : 1.537 PlasmaMembrane Reliability : 1.074

CDS

ATGCAGCTATTCACTTTGCAATTTGGACGAATCACCGCAGCAATCTCGGACGCTTCCGGAATCGTTCGACCGACATTATTTTTTCAGATTACAAACACAGGTCTTACTTCATCGAAATTTAGAGTGGTACTTCGCGAGTGCGACACACAACTGTTTGATATAAAAAACCTGACACAACCCGATTCAATTTTAATACCACCCAGATTAACAAGGCTTATGAAACTAGAACTTCCTGATTTGCAAGACGTCGATAGGTCCACTTGTTCAGTGGATTTGGTTAATCATGAAGATATCCCAATCGCTGCTAGACGTGTCGTAATCAAGAGAGGGGATCGTTGCTTCTGCATTTGGTTTTGTGAGTGTGTTTGCTTGGCTGATGATGCAAAATTAAACTGTAAAAAGATGCGAGAACCACGACAAGCGGCTGCAGGCTTGTCAAGAAAAGATATAGCGTTATCTCGAAGACCTCGTTCTTTCTGCTATAACGACAATGAAGCTGTTAATTTCATAGTTACATTTCTTGGTGTTTTAATAACACTTCTCTTGCTGGGTTCGTGTCTTGAGCATTTCATGTTCATAGAATTTTTTATTCCGTACTAG

Protein

MQLFTLQFGRITAAISDASGIVRPTLFFQITNTGLTSSKFRVVLRECDTQLFDIKNLTQPDSILIPPRLTRLMKLELPDLQDVDRSTCSVDLVNHEDIPIAARRVVIKRGDRCFCIWFCECVCLADDAKLNCKKMREPRQAAAGLSRKDIALSRRPRSFCYNDNEAVNFIVTFLGVLITLLLLGSCLEHFMFIEFFIPY

Uniprot

A0A212EKZ1 A0A3S2LCZ8 A0A194PJ31 A0A194R8V2 A0A0C9R172 F4WFD7 + More
E2AK58 A0A0L7R1J3 A0A151X694 A0A195CGY6 A0A154P4Q9 A0A2S2P7Z9 J9M478 A0A1S3HIK2

Pubmed

22118469 26354079 21719571 20798317 26383154

EMBL

AGBW02014166 OWR42160.1 RSAL01000040 RVE50992.1 KQ459602 KPI93431.1 + More
KQ460615 KPJ13680.1 GBYB01001710 JAG71477.1 GL888115 EGI67188.1 GL440194 EFN66162.1 KQ414667 KOC64661.1 KQ982490 KYQ55820.1 KQ977791 KYM99696.1 KQ434809 KZC06198.1 GGMR01012962 MBY25581.1 ABLF02029238 ABLF02029241

Proteomes

UP000007151 UP000283053 UP000053268 UP000053240 UP000007755 UP000000311 + More
UP000053825 UP000075809 UP000078542 UP000076502 UP000007819 UP000085678

Pfam

PF10699 HAP2-GCS1

Interpro

IPR018928 HAP2/GCS1_dom + More
IPR040326 HAP2/GCS1

ProteinModelPortal

A0A212EKZ1 A0A3S2LCZ8 A0A194PJ31 A0A194R8V2 A0A0C9R172 F4WFD7 + More
E2AK58 A0A0L7R1J3 A0A151X694 A0A195CGY6 A0A154P4Q9 A0A2S2P7Z9 J9M478 A0A1S3HIK2

KEGG

101744258 no KO assigned | (RefSeq) uncharacterized LOC101744258

GO

GO:0016021

PANTHER

PTHR31764

Length:

199

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.29549

Exp number, first 60 AAs:

0.14879

Total prob of N-in:

0.81256

inside

1 - 168

TMhelix

169 - 191

outside

192 - 199

Pi

281.862494

Theta

192.20427

Tajima's D

1.511682

CLR

0

CSRT

0.785260736963152

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics