Silkworm Genome Informatics Database

Gene

KWMTBOMO09072

Annotation

PREDICTED:_uncharacterized_protein_LOC101744832_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr15(+):10852845-10858619 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.797

CDS

ATGTTATTTAGATGTTTGTTTGTAATAAAATATAACCTGACCATGAAACGAAAAAGCTACACTCTTTCGAAGACATTGATTAAACAGGACTTCGAATTAAACTCGTATGAACCCAAAATAATTGAATTTACGTCTTTAACGTTACATAAGTCTACATATGCGCTGAAACCTGCCCCTATAAAAGAATATGAAACCACAAGCAATGTGTTGGCTGAAACAATTCACAATCTAAGTGATAGCGCTTGGAGAAATTCTACGGAATCAAGTATTCAGAAAAAGCCTAATATGAAGTCATTGAAATTAGCGATCTGTAAAGAATCATTTACCGGCAGATATCCACCTATTTACACCACTCCGGCCTACAATTTCTTTTTTATTGAAGTCGTTCGCCTGCGGCCTGACTTCAGCTTGACGCAATTAAACGTACCACTGTTCATCAGTATTGTTTTTATATGGATAATTATTTGGATATGCATGATTATCGAACGATTATTACACGGTAGGTTAATTTGGAACAATATTCAATCATGGTTTTTGATAGTGCCCTGGATATGGGTGTTTTTATTGATTATGACTGGAATTTCGAATCTAATCACAATGAAAAAAGCGTACCGAAAAATATTTCAAATTGGCGCAAAAGAAGTTATAGCAGGTATAGCAGACGCTATGGAAGTTGGATTATATATTCACTCAGCGAGCGTTGGTACTGAATTAATTCACGGGAAGGGCTTGAATCATTTTGCCTCGGGACATATTGATCCAGATTTAAACAATGAAAATGTTTGGCATTCTGTACTAACCCTACTATTAGCGGCGTTGCATTCTGCTGGAGGTACTTTATGTGCAGTTGTAGATTATTTACAGCCAAATTCTGAAGGCATTGTGAACGAACGTGAAAGTAATTTGTGGATTATTCCAATGTTCTCTAAATGTACGTCTGGTGGCAATTATACGCATCTGATGTCTTCGTTGATCTTTGGCGGTTTAATGTTCTCGTATGCGACAGTTGCATTTGTTCTACTCAAAACGGCTCTGCACACAATTTTTGAGTATAGAGTGAAATTAGTGTTTGTGGAACAATTTGTGGTTGCTGGTCTTATTCTAAGCTGCATGGCATTAAGTTTACTTTTTTCTACAAATGGAGGCATAGCATTGTTGGAAGCGGTTGAATCGATAAATACTGGCGTCACCATGCCCTTTGTGTGTTTAATGGAACTCGTTGGAATGTTGTACGTGTATCGCAGTCACGACTTCATATCCGATCTCAACTTAGCCATGGAAGAGGACGCCTGTTCGACACGTATCAGCGCGCAATGGCAATTTATACCTTTAATAGTTCTGGTTACGCTCATAGGAAAAGCTTGTATGTTATCGGAGACCGAGATTCCAAAGTACTTCATTATTATGGCGATAGTTCCCCTGAGCAGTGTGGTGCTAGCGGTGCCGCTGCGAGCTTGCCACAACGCATACGTATTCCTGCGCTCTAGATCGAGACGTTAA

Protein

MLFRCLFVIKYNLTMKRKSYTLSKTLIKQDFELNSYEPKIIEFTSLTLHKSTYALKPAPIKEYETTSNVLAETIHNLSDSAWRNSTESSIQKKPNMKSLKLAICKESFTGRYPPIYTTPAYNFFFIEVVRLRPDFSLTQLNVPLFISIVFIWIIIWICMIIERLLHGRLIWNNIQSWFLIVPWIWVFLLIMTGISNLITMKKAYRKIFQIGAKEVIAGIADAMEVGLYIHSASVGTELIHGKGLNHFASGHIDPDLNNENVWHSVLTLLLAALHSAGGTLCAVVDYLQPNSEGIVNERESNLWIIPMFSKCTSGGNYTHLMSSLIFGGLMFSYATVAFVLLKTALHTIFEYRVKLVFVEQFVVAGLILSCMALSLLFSTNGGIALLEAVESINTGVTMPFVCLMELVGMLYVYRSHDFISDLNLAMEEDACSTRISAQWQFIPLIVLVTLIGKACMLSETEIPKYFIIMAIVPLSSVVLAVPLRACHNAYVFLRSRSRR

Uniprot

A0A2H1WF05 A0A3S2LPA4 A0A194R8U3

Pubmed

26354079

EMBL

ODYU01007888 SOQ51054.1 RSAL01000040 RVE50983.1 KQ460615 KPJ13670.1 + More

Proteomes

UP000283053 UP000053240

Pfam

PF00209 SNF

Interpro

IPR000175 Na/ntran_symport + More
IPR037272 SNS_sf

SUPFAM

SSF161070 SSF161070

ProteinModelPortal

A0A2H1WF05 A0A3S2LPA4 A0A194R8U3

KEGG

101744832 no KO assigned | (RefSeq) sodium-dependent noradrenaline transporter-like

GO

GO:0005328 GO:0016021 GO:0015293 GO:0006836 GO:0005488 GO:0016579 GO:0010181 GO:0006811 GO:0016020 GO:0016876 GO:0043039

PANTHER

PTHR11616

Length:

499

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

166.97961

Exp number, first 60 AAs:

0

Total prob of N-in:

0.81872

inside

1 - 139

TMhelix

140 - 162

outside

163 - 176

TMhelix

177 - 199

inside

200 - 318

TMhelix

319 - 341

outside

342 - 355

TMhelix

356 - 378

inside

379 - 390

TMhelix

391 - 413

outside

414 - 464

TMhelix

465 - 487

inside

488 - 499

Pi

199.927341

Theta

171.362746

Tajima's D

0.758542

CLR

0.078558

CSRT

0.592470376481176

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics