SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09068  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007509
Annotation
PREDICTED:_beta-catenin-like_protein_1_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 3.483
 

Sequence

CDS
ATGGATGTTGCCGAGCTATTGACATTCAAACCTACGCCAACACCAAAACGGCCAAATGAAGATGAGAGCGATGAGGAGGATCAAGCCAAAAGTGCTAAAATTCGTCGTACCACCAAACTTAAACAGGAACCTGTACATTTGAGCAAGAATATGTTGAAGGAACCCTCGATTACTGATAAAGAACGAGAAGATATTCTTAAATTTGTTGCCACTGAAGTAACAGAGGGAGAAGTACTAGATGAAACCACAGTGAAGAAACTAGTTCTCAATTTTGAAAAGAAAGCACTTAGAAATAGAGAGATGAGGATTAAATTTCCTGATCAGCCAGACAAGTTTATGGACAGTGAAATTGATTTACATGATGCATTACAGGATTTAAGTGCTGTCGCAACAGTACCAGACCAGTATCCTCTGCTTGTGGAATTAAAGTGTGTGAACTCATTATTAGAATTACTATCACATGATAATACTGATGTCTCCACCAAAGTTGTTCAACTGCTACAGGAAATGACAGATGTTGACATACTCCATGAGAGTGAGGAAGGTGCGGAAGATTTAATAAATGCAATGGCTGAAGCTGAAGCACCTGCATTATTACTACACAACCTGACTCGATTGGATGAGCAGGTACCAGATGAACGAGACGCTGTCCATAATACACTGGGTATTATTGAAAATATCACAGAATTCAGACCAGAGCTTTGTATTGAAGTAGCAAAACAAGGATTTTTACAGTGGATTCTAAAAAGACTGAAGGTTAAACTGCCTTTTGATGGGAACAAACTGTATGCAACAGAAATTTTATCTATATTACTTCAGAACACTCCCGAAAACAGAAAACTACTGGGAGAACTTGATGGCATTGATGTTTTACTACAACAGCTAGCGTTTTACAAAAGACACGACCCCAGCGGCGCCGAAGAACAAGAGGCGATGGAGAACATGTTCGACTCACTGTGCTGCGCGCTCATGGAGCCCTCCAACCGGGACCGCTTCCTGCGCGGCGAGGGACTGCAACTCATGAACCTCATGTTGAGAGAGAAAAAAATGTCACGAAATGGTTCTTTGAAAGTACTGGATCACGCTCTCGTGGGACCCGACGGTCGCGATAATTGCAATAAATTTGTAGATATACTGGGGCTCCGAACTGTGTTTCCACTTTTTATGAAAACACCCAAAAGAAAACGATTATTAACTGTTGATCAACACGAAGAGCACGTAGTATCAATAATAGCATCCATGTTACGAAACTGTCAGGGAAGTCAAAGGCAGAGACTGTTGGCGAAGTTCACTGAAAACGATCTAGAGAAAGTAGATCGGTTGTTGGAGCTACATTTCAAATACATGGACAAAGTCGACAGAACCGAAAAAGATATGGAGCGTGAAACTGAAGAATTAGATGATGACGCTCAGTATTTGAAAAGGCTCTCGGGCGGTTTATTCACATTGCAACTTATAGACAGAATAATTTTGGAGGTGTGTACGGCCGGTCCGTCGACGATAAAGCAACGCGTCCAGCGTGTGTTGTCATTACGAGGCGGCTCCCTCAAGATTATCAGACATGTAATGAGGGAATATGCGGGCAACCTCGGCGACGCTGGAAGCGAGGAGTGGCGGCAACAAGAACAACAGCATATATTGCAACTCGTTGATAAGTTTTAA
Protein
MDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMRIKFPDQPDKFMDSEIDLHDALQDLSAVATVPDQYPLLVELKCVNSLLELLSHDNTDVSTKVVQLLQEMTDVDILHESEEGAEDLINAMAEAEAPALLLHNLTRLDEQVPDERDAVHNTLGIIENITEFRPELCIEVAKQGFLQWILKRLKVKLPFDGNKLYATEILSILLQNTPENRKLLGELDGIDVLLQQLAFYKRHDPSGAEEQEAMENMFDSLCCALMEPSNRDRFLRGEGLQLMNLMLREKKMSRNGSLKVLDHALVGPDGRDNCNKFVDILGLRTVFPLFMKTPKRKRLLTVDQHEEHVVSIIASMLRNCQGSQRQRLLAKFTENDLEKVDRLLELHFKYMDKVDRTEKDMERETEELDDDAQYLKRLSGGLFTLQLIDRIILEVCTAGPSTIKQRVQRVLSLRGGSLKIIRHVMREYAGNLGDAGSEEWRQQEQQHILQLVDKF

Summary

EMBL
BABH01030150    BABH01030151    KQ460615    KPJ13667.1    KQ459602    KPI93414.1    + More
NWSH01001498    PCG71063.1    AGBW02008329    OWR53653.1    RSAL01000040    RVE50979.1    ODYU01007888    SOQ51057.1    JTDY01001602    KOB73404.1    GEZM01037132    JAV82150.1    DS497724    EFA12950.1    KQ435727    KOX77840.1    CH477194    EAT48471.1    GBYB01014638    GBYB01014639    JAG84405.1    JAG84406.1    ADTU01001367    GL888217    EGI64657.1    LJIG01016201    KRT81311.1    KQ981264    KYN44055.1    KQ414584    KOC70584.1    GECZ01015994    GECZ01005817    JAS53775.1    JAS63952.1    GECU01029976    GECU01023778    JAS77730.1    JAS83928.1    GL452135    EFN77862.1    GEBQ01019946    JAT20031.1    APGK01057248    KB741279    ENN71043.1    JXUM01015742    KQ560438    KXJ82411.1    KQ980989    KYN10628.1    GAPW01000744    JAC12854.1    KQ976519    KYM82128.1    LBMM01008686    KMQ88698.1    JXUM01059025    KQ562031    KXJ76861.1    KK107474    QOIP01000002    EZA50155.1    RLU25397.1    DS231918    EDS26233.1    KK853083    KDR11648.1    KQ978220    KYM96329.1    GGFK01009415    MBW42736.1    AAAB01008987    EAA01129.1    AXCN02000029    KZ288282    PBC29542.1    GBHO01019613    GBRD01000859    GDHC01003388    JAG23991.1    JAG64962.1    JAQ15241.1    KQ982353    KYQ57177.1    APCN01000853    ADMH02000111    ETN67797.1    GFDL01011022    JAV24023.1    NEVH01003741    PNF40287.1    AXCM01011710    GDKW01001088    JAI55507.1    KK854093    PTY11156.1    GGFJ01003868    MBW53009.1    KB631120    KB631121    KB631861    ERL84120.1    ERL84123.1    ERL86767.1    GBGD01001009    JAC87880.1    GEDC01027600    JAS09698.1    JRES01000223    KNC33203.1    GECL01001696    JAP04428.1    ABLF02010177    GAMC01006102    JAC00454.1    GFXV01005311    MBW17116.1    CH480815    EDW42953.1    GAKP01014380    GAKP01014378    JAC44574.1    AE014297    AY051943    AAF54309.1    AAK93367.1    GDHF01011425    JAI40889.1    JXJN01024780    KA648711    AFP63340.1    KQ434806    KZC06120.1    GBXI01009437    GBXI01007681    JAD04855.1    JAD06611.1    CCAG010018274    CH964232    EDW81269.1    GFDF01003309    JAV10775.1    CH933806    EDW15579.1    GFDF01003308    JAV10776.1    AJVK01013016    CM000364    EDX13697.1    CM000160    EDW96589.1    CH940650    EDW66792.1    CM000070    EAL28653.1    OUUW01000008    SPP84431.1    ACPB03002116    SPP84432.1    CH954181    EDV49850.1    CH916373    EDV95084.1    CH479182    EDW34482.1   
Pfam
PF08216   CTNNBL
Interpro
IPR011989   ARM-like        + More
IPR039678   CTNNBL1       
IPR016024   ARM-type_fold       
IPR013180   CTNNBL1_N       
IPR000225   Armadillo       
SUPFAM
SSF48371   SSF48371       
Gene 3D
PDB
4HM9     E-value=1.26491e-159,     Score=1446

Ontologies

Topology

Length:
553
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00167
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00049
outside
1  -  553
 
 

Population Genetic Test Statistics

Pi
260.820833
Theta
194.175563
Tajima's D
1.658202
CLR
0.438297
CSRT
0.817859107044648
Interpretation
Uncertain
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