SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09063
Pre Gene Modal
BGIBMGA007506
Annotation
Uncharacterized_protein_OBRU01_09085_[Operophtera_brumata]
Location in the cell
PlasmaMembrane   Reliability : 1.501
 

Sequence

CDS
ATGAACCCTAAAAATCGTATCGCTAAGGCTTGTGATGACAGGCCTTTTGAAGGGTTGATAATAACAAACACTGAACCGCTTAGTTCTCTATCTAGTAGAAGTGCTTGCCCACGTTGCGGCAAGTCAAGAATGTACTTTTGTTATGTTTGCTTTATTCCAGTACCAGCACTTGAAGGAAAAATACCTTACTGTAAACTACCAATAAAAGTGGATATTATCAAACACAAAGGAGAGATTAATGGTAAAAGCACTGCAGCCCATGCTGCTGTTCTTGCTCCACGGGATGTCACAGTGTACACATATCCAGATATTCCAGATTATCCTACTGATGGAAAGATTACTATCCTGTGCATAATCCAGATCAAAATCATCCTCAATGTGATCCTTATGTTGGACAATATGACAACTTATTATTCTTTTTTGTTTTTATGTATTCAAAGTTACATGAACTTTATAAACATGAAGATTTGTTAG
Protein
MNPKNRIAKACDDRPFEGLIITNTEPLSSLSSRSACPRCGKSRMYFCYVCFIPVPALEGKIPYCKLPIKVDIIKHKGEINGKSTAAHAAVLAPRDVTVYTYPDIPDYPTDGKITILCIIQIKIILNVILMLDNMTTYYSFLFLCIQSYMNFINMKIC

Summary

Pfam
PF03942   DTW
Interpro
IPR005636   DTW       

Ontologies

GO

Topology

Length:
157
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
24.4178
Exp number, first 60 AAs:
0.51015
Total prob of N-in:
0.77807
inside
1  -  122
TMhelix
123  -  145
outside
146  -  157
 
 

Population Genetic Test Statistics

Pi
163.896971
Theta
163.420725
Tajima's D
0.009165
CLR
0.507553
CSRT
0.378531073446328
Interpretation
Uncertain
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