Gene

KWMTBOMO09061

Pre Gene Modal

BGIBMGA007584

Annotation

PREDICTED:_gamma-tubulin_complex_component_3_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr15(-):10722073-10729644      View in EpiBrowser

Full name

Gamma-tubulin complex component      

Location in the cell

Nuclear   Reliability : 1.879

CDS

ATGTTGTTCCTAACCCAAGTTTATTTTCGTAGGGAAGAACTGAACAAGCCCGCCACGTCCCTATACGTACACAACCTGACGTGTACGTTGGAGGCGGCCGTGCGTGCTACCAACGCGCAGTACGAGCCGTCTCACGTGCTCGCTAGATTGCACGTTAATTTGTATCCCAACTGCGACGGGCGCGAGGACAGCGGCTGGGACGTGTTCGCGCTGCAGTACCGCGTGGACGGGCCGCTGGGCACGCTGTTCCCGGCCACGTGCGCCGCGCGCTACCGGGCCCTGTTCACGCAGCTCTGGCGCGTCAAGCGCATCGAGTACAGTCTGCACGACGCCTGGCGCGAACACACCATACTGCACAAGCGACTCAAACACATGCCCGAGGTGTGGGCGGTGATGCGGCGCGTGTGCTGCGTGCGGGCGGAGGCGCTGCGGGTGTGCGGCGCGCTGCAGGAGGCGAGCTGCGCGGGCGCCGAGGACGACTGGGCCGAGCTGCTCGCCGCGGCCGCCTCGCGCACCGACCTCGACCGTCTGCTGCATCTGCACCTGCGCGCGCTCGACCAGCACTCCGTGCACGCCATGATACACCACTCCACGCAGGAGCTTCAGTCGTATTTGGGGAACGTTCTGAACGAGACGTTGGCGCTTCGCAGCTTTGAGTCGATGCTGCACGCTGGGATCGTCGCCGAACTCGAGAGACGAGATCGACTCGAACGACTGAAGGCAGAGAGAGTAGCGAGGGGCGAATACGCTTTTACTGCTGCTGACGAAGCTGAGGATAAAGAAAAGCGAAAGAATTTCAATCAATTTATAGCCAAAAGGAAAGCCGATCTAAACGTGTGGACGCGCACGTATAGGGGTCACGTGACAGCTCTCATCCTCAAGCTGGCGCTCCATTCAGAAATCTCACTACAAACGTTAGCCTTCCGCTTGGACTATAGCGACTTCTACAAGCGGGGCGACGCCAAACTGCACGAGCCACTAACATACCAGCATAAGCGACTCAGTGAAATCGGACTCAATTTAGCTAAGAGTAAATATATAGAACGATCGAAAAAGAAATGA

Protein

MLFLTQVYFRREELNKPATSLYVHNLTCTLEAAVRATNAQYEPSHVLARLHVNLYPNCDGREDSGWDVFALQYRVDGPLGTLFPATCAARYRALFTQLWRVKRIEYSLHDAWREHTILHKRLKHMPEVWAVMRRVCCVRAEALRVCGALQEASCAGAEDDWAELLAAAASRTDLDRLLHLHLRALDQHSVHAMIHHSTQELQSYLGNVLNETLALRSFESMLHAGIVAELERRDRLERLKAERVARGEYAFTAADEAEDKEKRKNFNQFIAKRKADLNVWTRTYRGHVTALILKLALHSEISLQTLAFRLDYSDFYKRGDAKLHEPLTYQHKRLSEIGLNLAKSKYIERSKKK

Description

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.

Similarity

Belongs to the TUBGCP family.

Feature

chain  Gamma-tubulin complex component

Uniprot

H9JDI7   A0A3S2LPZ6   A0A2H1WMF8   A0A194RCM7   A0A0N1ICU2   A0A2A4IZM8   + More
A0A194PJ08   A0A0N7ZBX6   A0A2D4PTD2   A0A1W4ZP10   A0A402E723   A0A3B3BP54   A0A151NWR3   A0A1A8DBA6   A0A091RZE8   A0A315W991   A0A091NPM1   A0A1U8DSP1   H2V5A1   A0A452GUX9   U3JP55   A0A452GUL5   A0A3B4GG01   B1H2U5   A0A3Q3N9I1   H0ZF74   K7FDY1   A0A3P8S6S3   A0A3P9P425   A0A093L738   A0A3P9BLA9   A0A093L3E7   A0A3Q3SXC1   A0A3B4GGC3   A0A3Q4GNP9   A0A091SZP8   A0A3B3YA51   A0A3L8SSW5   A0A146MN56   A0A2I0U3Q2   A0A3P9BLB1   A0A218V4L1   A0A093Q8Y2   A0A099Z0P1   A0A3Q3BSF7   A0A3B3YAU2   A0A3Q3BSG3   A0A096M6Z5   S7Q6R9   A0A1A8JJU2   A0A3B3YA23   A0A3B4ZZ02   A0A3Q1F7P1   A0A3B3UBV3   A0A3Q1HNX5   A0A091JUR5   A0A091VRW0   A0A3B4ZW50   A0A091EUZ6   A0A093JAJ9   A0A1V4J3Q7   A0A1A8HKA6   A0A093PHT2   A0A094KBU1   A0A093F202   A0A093GGC3   A0A2I0MS14   A0A1A7XY82   A0A093CFW4   F7FYI4   F7FYI0   A0A1A8PI48   A0A0Q3PBE8   A0A1A8UAJ8   A0A1A8PVL7   H2V5A2   G3PPT3   A0A091V2C3   I3K302   A0A087QVV7   I3K301   A0A2D4MQG4   A0A1A8I4Q9   G1KFE6   A0A1A8CDV9   A0A093C2U9   A0A3P9P481   A0A0A0AYK4   A0A3Q1HGG1   A0A3P8XIG1   A0A2I4CJB0   A0A093NVD4   A0A3P8XIJ0   Q3TAJ6  

Pubmed

19121390    26354079    29451363    22293439    29703783    21551351    + More
28562605    20431018    20360741    17381049    25186727    30282656    23371554    18464734    25069045    10349636    11042159    11076861    11217851    12466851    16141073   

EMBL

BABH01030156    BABH01030157    BABH01030158    BABH01030159    BABH01030160    BABH01030161    + More
BABH01030162    RSAL01000033    RVE51436.1    ODYU01009673    SOQ54260.1    KQ460615    KPJ13661.1    KQ458550    KPJ05828.1    NWSH01004559    PCG64946.1    KQ459602    KPI93406.1    GDRN01076660    JAI62872.1    IACN01094232    LAB61267.1    BDOT01000002    GCF39997.1    AKHW03001628    KYO41317.1    HAEA01002116    SBQ30596.1    KK711679    KFQ33742.1    NHOQ01000199    PWA32261.1    KL389965    KFP91291.1    AGTO01021769    AAMC01018036    AAMC01018037    AAMC01018038    AAMC01018039    BC161134    AAI61134.1    ABQF01012746    ABQF01012747    ABQF01012748    AGCU01201049    AGCU01201050    AGCU01201051    AGCU01201052    AGCU01201053    AGCU01201054    AGCU01201055    AGCU01201056    AGCU01201057    AGCU01201058    KK598990    KFW05041.1    KK565261    KFW03931.1    KK493592    KFQ64359.1    QUSF01000007    RLW07751.1    GCES01166262    JAQ20060.1    KZ506232    PKU40631.1    MUZQ01000048    OWK61025.1    KL671632    KFW82890.1    KL887848    KGL75272.1    AYCK01010677    KE164597    EPQ19068.1    HAEE01000182    SBR20198.1    KK529832    KFP27673.1    KK734270    KFR05450.1    KK718990    KFO60831.1    KL205878    KFV75929.1    LSYS01009367    OPJ66853.1    HAEB01000839    HAEC01015656    SBQ83877.1    KL411896    KFW73805.1    KL342492    KFZ53761.1    KK615101    KFV48246.1    KL215656    KFV65987.1    AKCR02000003    PKK32461.1    HADX01000870    SBP23102.1    KL245925    KFV14790.1    HAEI01002567    SBR80893.1    LMAW01002679    KQK78235.1    HADY01008099    HAEJ01004169    SBS44626.1    HAEF01000337    HAEG01009639    SBR85024.1    KL410507    KFQ96851.1    AERX01006249    KL225954    KFM05361.1    IACM01115903    LAB35249.1    HAED01004913    SBQ90943.1    HADZ01012999    SBP76940.1    KL453423    KFV07394.1    KL873489    KGL98967.1    KL225186    KFW68688.1    AK171804    BAE42672.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000218220    UP000192224    + More
UP000288954    UP000261560    UP000050525    UP000189705    UP000005226    UP000291020    UP000016665    UP000261460    UP000008143    UP000261640    UP000007754    UP000007267    UP000265080    UP000242638    UP000265160    UP000261580    UP000261480    UP000276834    UP000197619    UP000053258    UP000053641    UP000264840    UP000028760    UP000261400    UP000257200    UP000261500    UP000053605    UP000052976    UP000053584    UP000190648    UP000053875    UP000053872    UP000002279    UP000051836    UP000007635    UP000053283    UP000005207    UP000053286    UP000001646    UP000053858    UP000265040    UP000265140    UP000192220    UP000054081   

PRIDE

H9JDI7    Q3TAJ6   

Pfam

PF04130   GCP_C_terminal        + More
PF17681   GCP_N_terminal

Interpro

IPR041470   GCP_N        + More
IPR007259   GCP       
IPR040457   GCP_C       
IPR042241   GCP_C_sf       

Gene 3D

1.20.120.1900    

ProteinModelPortal

H9JDI7   A0A3S2LPZ6   A0A2H1WMF8   A0A194RCM7   A0A0N1ICU2   A0A2A4IZM8   + More
A0A194PJ08   A0A0N7ZBX6   A0A2D4PTD2   A0A1W4ZP10   A0A402E723   A0A3B3BP54   A0A151NWR3   A0A1A8DBA6   A0A091RZE8   A0A315W991   A0A091NPM1   A0A1U8DSP1   H2V5A1   A0A452GUX9   U3JP55   A0A452GUL5   A0A3B4GG01   B1H2U5   A0A3Q3N9I1   H0ZF74   K7FDY1   A0A3P8S6S3   A0A3P9P425   A0A093L738   A0A3P9BLA9   A0A093L3E7   A0A3Q3SXC1   A0A3B4GGC3   A0A3Q4GNP9   A0A091SZP8   A0A3B3YA51   A0A3L8SSW5   A0A146MN56   A0A2I0U3Q2   A0A3P9BLB1   A0A218V4L1   A0A093Q8Y2   A0A099Z0P1   A0A3Q3BSF7   A0A3B3YAU2   A0A3Q3BSG3   A0A096M6Z5   S7Q6R9   A0A1A8JJU2   A0A3B3YA23   A0A3B4ZZ02   A0A3Q1F7P1   A0A3B3UBV3   A0A3Q1HNX5   A0A091JUR5   A0A091VRW0   A0A3B4ZW50   A0A091EUZ6   A0A093JAJ9   A0A1V4J3Q7   A0A1A8HKA6   A0A093PHT2   A0A094KBU1   A0A093F202   A0A093GGC3   A0A2I0MS14   A0A1A7XY82   A0A093CFW4   F7FYI4   F7FYI0   A0A1A8PI48   A0A0Q3PBE8   A0A1A8UAJ8   A0A1A8PVL7   H2V5A2   G3PPT3   A0A091V2C3   I3K302   A0A087QVV7   I3K301   A0A2D4MQG4   A0A1A8I4Q9   G1KFE6   A0A1A8CDV9   A0A093C2U9   A0A3P9P481   A0A0A0AYK4   A0A3Q1HGG1   A0A3P8XIG1   A0A2I4CJB0   A0A093NVD4   A0A3P8XIJ0   Q3TAJ6  

PDB

3RIP     E-value=0.00821088,     Score=92

KEGG

101738472    K16570 gamma-tubulin complex component 3 | (RefSeq) gamma-tubulin complex component 3 homolog

GO

GO:0005874   GO:0007020   GO:0005737   GO:0005815   GO:0000922   GO:0043015   GO:0005813   GO:0005827   GO:0005814   GO:0051415   GO:0051321   GO:0008275   GO:0051225   GO:0000278   GO:0031122   GO:0000930   GO:0000923   GO:0000226   GO:0005254   GO:0006811   GO:0016020   GO:0016876   GO:0043039  

PANTHER

PTHR19302  

Subcellular location

  

Length:

353

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03191

Exp number, first 60 AAs:

0.00151

Total prob of N-in:

0.01200

outside

1  -  353

 

 

Pi

388.721048

Theta

172.236915

Tajima's D

4.866039

CLR

0.490168

CSRT

0.999950002499875

Interpretation

Uncertain