SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09043  Validated by peptides from experiments
Annotation
PREDICTED:_filamin-A_isoform_X3_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.188 Nuclear   Reliability : 1.155
 

Sequence

CDS
ATGGCGGGGCCGGTGGGCGGCGGTGGCGGAGAGCCGACCAGACTAATCCCCGCACGAGTGCCCGCCGTCTTCGAGATATCCACATCTCCTGGTTCTGCAACTTTTACTAAAAATGATGTCGGAGTAACAGTCACATCTCCGTCGAGACGTCCAGTGAACGTCCGAGTTCTGGACGTGGCAGAACGTCCGGGTCTGTACCGCATCGAGTTCACTCCTGAAGAGGTCGGCACGCATTTGATCGATGTATCGATAGCAGATGATAAGCTGGCCGGCGGACCGCTGGTGGCGAAGGTGTATGACGCGAGTCTGATTAAGGTCACAGACTTGGGCAACGCCGTCGTCGGACAACAATGTCAATTTAAAGTGGACGCGAGCGCCGCTGGAGAGGGACAGTTGGAAATTTCTATTAACGAAGGAGAAGTCCCGAATCATGTACAGGTTGTAGGAGGAGGAAAATGTTTGGTATACTGGCGACCAGAGGCGGCGTCTCCTCACCGCGTCGACATCAAGTTCAACGGTGAGCCCGTTCCGTCGTCTCCATTCGTCTTCCAAGTAGCACCGGCGCAGAGAGTGACCATCGATACTTCGCAAGTTGAATTAATACCAGTCGGTGACGTAGCGTCATGTTCAGTAAGAGTAGAAGGTTCATCGGGTGGAGAATTGACGGTTACGGTGCGCGGTCCTCGAGGAGAGGTTCCCGTGCGACTCACGGGCGATGCCGTCACCGGGCTCGTCGCGAGTTTCACACCCAAAAACGTTGGACCTCATACATTGACCGCTCACTATAACAACCAACCTGTACCCGGAACACCATTCACGTGCAAAGCCTACGATGGGAAGCTGGTGAGCGTGACAGGAGCAACGTCAGCCCGCGTCGGAGTACCTGTCCAACTGGCTGTGGACGCCGCGCAGGCTGGAGAAGGAAACCTCGAAATCACTGTTTCCGCACGGGGACTCAACATTCCCACGCAAGTACATCCACAAGGAAATGCACGCTTCACCGTGTCCTTCACTCCGACTGAAGTGTGCGACCACATTGTCAATGTTTCTTTCAATAAGATGCGAGTACCGGGATGTCCGCTAGTGTTGCCGGTGTCGGAAGGGGCAGGGGGGGCGGCCCGTGTGTCTGTCCCGGGCCCCGCACGGCTGCACCACCCCGCCGCGCTCACGCTGCACCACGCCACCGCCACGCTCGACCAGATCGAAGTCAATGTGGAAGGCAGACGAGCATACAATCCACCTGATGGTAAGTGGTTACCGTCGCCCATGGACTTCAGCTATGCCAGAGGCTGGGCAATAGCGTGTATTGGTGTTTGGATGGAACATGAGCTAATTAGAGCGACAAGAAAGTGTGCCACATCGGTTGGGGTGTTAGGGCGTGGCGGTGAGCTGAGCTATGGACGTGGGGCAGGTCCTAATGGGGCGTCGGTGCCGGCGGCGGTGTCTTCGGCGGGTCCTGCCGCCTTTCGAGCAGAGTTCGTGCCGCGCGCCGTCGGGGAACACAGACTCAACGTTCTTATCGACTCTGTGCCCATTCCAGCCAGCCCCTTCCATCTAAAGGTATACGATGTATCAGCTATAAGAGTCAAAGATGTGGCGCACGGTACTGTCGGTAAACCTGTCACTTTTTTAGTGGAGACAATGGCCGCTGGTCCTGGGAATTTAGAGGTGACGGTGAATGGCGGCCGGGTACCGACTGCGGCGGCAGCGCAAGGAGCTCACACATACGCCATCAGCTTCACGCCGCGGGATCCGAGGCCTCACACCGTTGAACTGCGTTTCAACGGCGATCATGTGCCTGGCAGTCCATTCGTGTGTCACGTGTCGGCGCCAGCGCGCGTGATCGGTGCAGGATCGGGCGAGCCTCCGGAGAAGGTGTCGGTTGGTGACGCGTATACGTTCAGCGTCGACTCGCCTACGTCACCGCACGTCGAGGTGCTTGGCCCCGCCAGGAGACCCGTCACTGTGCAAGTATCTGCTGAAGAAACCGTAGGTGAAAACGAGGCGAGCAAACGGTACACCATCTCATTTGTGCCTGTTGATGTAGGAGATCACAGTATTGAGGTTCGCGCCGGCGCTTCGGGCGGTCACGTGGAGGGTAGTCCGTTCTTGGTGAAGGCGTACAGCGCCGCGCGGGTCAGCGTCACTGACATCTCGCCGGGTGTCGTCGGAAGACCTGTGTCCTTCACCATCAACGCATCACATGCTGGTGCCGGCAACTTAGAAATTATCGTAGCCGTTAACGGTCGAAACGTGCCTAATTATGTGCAGAGTGAAGGAAATGCGAGATTCAAGGTGAACTTCAAGCCGGTAGAAGCGGCGCCGCACACGCTGTCGGTCCGGTTCAACGGTCACGCGGTTCCGGGCTCGCCGTTCACGTGTGCCGTGTCCGCACCGACCGCGGCGCCGGACGCGCGCGCATCCGGTGCCGGCTTAGTGTCGGCACCGCGCGGTGACCCTGCCGACATACATCTCACCGGCTTCCAGACAGCTGAGCCCACAATTTACGTGACCGGCCCGGGTGGGACCAACGTACGAACCCGTGTAACGCCATTAGGTGATGGTCGCTATACAGCAACTTACACTCCGGAGGCTGTTGGACGACACAGTGTGCAAGTGACGTGCGCGGGACGACACGTGCCGGGCTCTCCTTTCACATGCAACGTGTACGATGTACGCCGCGTCAGAGTCACCGGCCTTGGACCTGGAGAACTGGAGGGTACATTAGAAGGGCTGAGTTTGGATGAAGGTGTGGAAGAAGAGAGAGGTGTAGAAGTTGGTAAGCCAGTGACATTCAGTGTGGATGCAGCAGGCGCGGGTGAAGGAACACTGGAACTGGTGGTATCTACACCCACTACAACAGTGAAGGCTGAGGTAGTGGCTGTGGCCCGTGGTCTGTACGATGTGACTTTTGTGCCAGTTTCTCGAGAGCCTCATCGAGTGTCAGTCACGTTCAATGAACAAGCAGTTCCTGGTAGTCCATTCATTTGCCGCGTCAACGAACCACACACTTATGTACAAATTGGTGGAGTTGCAACAGTGGAGATCGACGAGAGTCTTTCAGACGTAGACGTAATATCTCCTACTGGAGTGCGTGTTTCTGATGCACAGCTCGAGGACACTGGTCTCCTAACGTTTCCTGCGAGTCGTGTTGGTAGATATGTTGTCAGAAGTGCAAAGGGACCGGTGGCGGAAGTCGAGGCTGTTGATGCCACTGCTGTAAAGGTGTTGTCTATTGGAAATGCAGTGGTTCACCGACCAGCTATATTGACCGTGAGCACGCATGGCGCGGGTGCCGGTCGACTGTCTGGTCGTGTGTCGTGCGGCGGTGCGACGGTCCCCCACTCGGTGCGTCGGCGCGGGGGATCACGGCACGAGGTCGTGTGGCACCCAGCGCGTGCAGCCCCTCACCGCCTGACGCTGCTGTGGAGCGGCGCGCCAATCGACAGAGAACCGTTACTCGTCGATGTGCATCCACCACACCATGGACAAGAGGTGGCAGCTTCTGGTCTAGGTTTATACCAAGCTCAGGTTAATAAAGTGGCATCATTCAGTATCGACACCCTGGGTCGACCTGCTCGGGAATTCGACGTGGTCGTCTCCGGACCTGGCTCTCGAGCACTGCCCGTAAGATGTTATCAAACCAAGTCTGGCTTGTTGCAAGCAGAATTCACTATTAATGAAGTTGGACAGAGTACTATAGAGGTTTTACATCTATCCAAGCCGGTATCCGGGAGTCCATACACATGCGAGTCCTTCGACCCAAACAGAGTGATAGTTTCTGGTTTACCAACTGGAAATATTGTTGCACAAACGCCAATCAATTTCAGTGTTGTAACAAAGGACGCGGGAGTTGGTGAATTAGACGTGGTGTGTGAAGCGATGGGTGAGCGTCGCATCCGACTGCCCGTTGACATCCGAGAGGATGGACACACGCACAGAGTGCGATTGCGTCCCACTGTACCCTCACATTACAGGATTTACATCACCTATGGAGGTGCTCCAGTATTAGGCAGTCCAATATCTTTGGGAGTTTTAAGTGGTAGAAGCAGTTCTGCCGCCAAATGTTCAGGTACCGGACTTGCGCATGCTCATGTCGGCAAGGAAGCGGCCTTCACTATACACTGTGCTGAAGATACGTCACCAACTGTCGAGGTGGAGAGATTATCAAATGACAAAGAAGACAATCCAGACTCGGGGTTGCTAGAGTGCAGAGTGCTGTCGGGTGCGCCACGCGAGTGGCTCTGCGCCTACATCCCTCTGGTCGTCGGTTTGTACGAAGTCAGGATATTCACATCCACTGGACCGCTACCAGGAAGTCCGTTCTCCGTCAAAGTAATAGACACATCAGCCATAGTACCAGTCGGAGGATGGGGAACTGATAACTCTGGACGAGTGCGAGCTCCTTCCAAGCTAGTCCTAGACACGAGCAATGCTGGGCCCGGTACACTAGAATGTTTACTCGCTGGGAGGCATCAACGTGTAGAAACAGTATCCGGACGATCAGTAGTCACTCTCGTCGCAGCTGAAGGTATCAGCGGAGAACAAGAGTTTGAACTTTCTTACAACGGAGCGCTTGTTGCTGGTGCTCCTAGAAAAGCTCTAGTCGCATCTGGCAACACTGCAGACAGAGTAACTCTTGCTGGCAGAGGATTGGCGCATGCGGCACCTCACACACCCGCTGTCTTCACTATCGATGGTAGTGCAGCTGGTCCGGGAGCGCCTGAAGCTTCACTTTTGACGCCGGACGGTGACGTCGTGCCGGTCGCGCTCGCGCCCGCCGGGCCTGGACTGTGGAGAGCTACTTACACACCAAGGCGACCTGGAGACCATCAACTACGAGTTTTGTGGGCTGGGAGATTAGTCAAAGGGTGTCCTCTAACGGTGAACGTAGCAACCGGTTCGGAAAGTGGTGATGCATCACGTGTGGTATGTTCGGGAGCCGGACTGACTGGCGGTGTTGTGGGGAGGGAGATCCGATCCTGGATCGATACCAGACGAGCAGGTCCCGGGGAACTAACGGCCCATTGTACTGGACCTAATAAGGTAGCATACTGTGAGCTATACGAACACGGCGACGGTACGTTCACACTAAATGTGAAACCGGCGGAGGCTGGACGACACGTGCTGAGCATACAATTCGCTGGTGAACACGTGCCGGGCTCGCCGTTTGTACTAAAAGTGGCCGGAGCTCCAGACCCTTCAAAGGTCCGCGTGTACGGCCCGGGCGTGGAGCCGGGTGTGCTGGCGTCGTTCCAATCGCGGTTCGTGTGCGACACGCGCGGAGCCGGCGCCGGGCAGCTCACCGTCCGCGTACGGGGACCCAAGGGCGCCTTCCGGGTCGAGATGCAACGCGAGAGCCAAAAGGACCGCACCATACTCTGCAAGTTCTCGCCGACGGAGCCGGGCGATTACCGCGTCGAAGTCCGTTGGGCCGGACGCCATGTTCCCGGTTCGCCTTTCCCAGTCATGATCTTCGACACCCAGGAGGAACTACGCCGATACATGCAGGCTACCACTACATAA
Protein
MAGPVGGGGGEPTRLIPARVPAVFEISTSPGSATFTKNDVGVTVTSPSRRPVNVRVLDVAERPGLYRIEFTPEEVGTHLIDVSIADDKLAGGPLVAKVYDASLIKVTDLGNAVVGQQCQFKVDASAAGEGQLEISINEGEVPNHVQVVGGGKCLVYWRPEAASPHRVDIKFNGEPVPSSPFVFQVAPAQRVTIDTSQVELIPVGDVASCSVRVEGSSGGELTVTVRGPRGEVPVRLTGDAVTGLVASFTPKNVGPHTLTAHYNNQPVPGTPFTCKAYDGKLVSVTGATSARVGVPVQLAVDAAQAGEGNLEITVSARGLNIPTQVHPQGNARFTVSFTPTEVCDHIVNVSFNKMRVPGCPLVLPVSEGAGGAARVSVPGPARLHHPAALTLHHATATLDQIEVNVEGRRAYNPPDGKWLPSPMDFSYARGWAIACIGVWMEHELIRATRKCATSVGVLGRGGELSYGRGAGPNGASVPAAVSSAGPAAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETMAAGPGNLEVTVNGGRVPTAAAAQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTFSVDSPTSPHVEVLGPARRPVTVQVSAEETVGENEASKRYTISFVPVDVGDHSIEVRAGASGGHVEGSPFLVKAYSAARVSVTDISPGVVGRPVSFTINASHAGAGNLEIIVAVNGRNVPNYVQSEGNARFKVNFKPVEAAPHTLSVRFNGHAVPGSPFTCAVSAPTAAPDARASGAGLVSAPRGDPADIHLTGFQTAEPTIYVTGPGGTNVRTRVTPLGDGRYTATYTPEAVGRHSVQVTCAGRHVPGSPFTCNVYDVRRVRVTGLGPGELEGTLEGLSLDEGVEEERGVEVGKPVTFSVDAAGAGEGTLELVVSTPTTTVKAEVVAVARGLYDVTFVPVSREPHRVSVTFNEQAVPGSPFICRVNEPHTYVQIGGVATVEIDESLSDVDVISPTGVRVSDAQLEDTGLLTFPASRVGRYVVRSAKGPVAEVEAVDATAVKVLSIGNAVVHRPAILTVSTHGAGAGRLSGRVSCGGATVPHSVRRRGGSRHEVVWHPARAAPHRLTLLWSGAPIDREPLLVDVHPPHHGQEVAASGLGLYQAQVNKVASFSIDTLGRPAREFDVVVSGPGSRALPVRCYQTKSGLLQAEFTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGLPTGNIVAQTPINFSVVTKDAGVGELDVVCEAMGERRIRLPVDIREDGHTHRVRLRPTVPSHYRIYITYGGAPVLGSPISLGVLSGRSSSAAKCSGTGLAHAHVGKEAAFTIHCAEDTSPTVEVERLSNDKEDNPDSGLLECRVLSGAPREWLCAYIPLVVGLYEVRIFTSTGPLPGSPFSVKVIDTSAIVPVGGWGTDNSGRVRAPSKLVLDTSNAGPGTLECLLAGRHQRVETVSGRSVVTLVAAEGISGEQEFELSYNGALVAGAPRKALVASGNTADRVTLAGRGLAHAAPHTPAVFTIDGSAAGPGAPEASLLTPDGDVVPVALAPAGPGLWRATYTPRRPGDHQLRVLWAGRLVKGCPLTVNVATGSESGDASRVVCSGAGLTGGVVGREIRSWIDTRRAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAGRHVLSIQFAGEHVPGSPFVLKVAGAPDPSKVRVYGPGVEPGVLASFQSRFVCDTRGAGAGQLTVRVRGPKGAFRVEMQRESQKDRTILCKFSPTEPGDYRVEVRWAGRHVPGSPFPVMIFDTQEELRRYMQATTT

Summary

EMBL
KQ460615    KPJ13646.1    KQ459602    KPI93389.1    GEZM01051593    JAV74783.1    + More
KZ288310    PBC28629.1    GDHF01015894    JAI36420.1    GBXI01012778    JAD01514.1    GBXI01014377    JAC99914.1    KB632288    ERL91502.1    GFDF01000241    JAV13843.1    GAMC01019056    GAMC01019054    JAB87499.1    CCAG010006069    CCAG010006070    CCAG010006071    CCAG010006072    UFQS01001786    UFQT01001786    SSX12350.1    SSX31801.1    GDHF01005551    JAI46763.1    JRES01000264    KNC32850.1    GAMC01019052    GAMC01019047    JAB87508.1    AAAB01008807    EAA04688.4    CM002911    KMY95862.1    AXCM01007775    AE013599    AGB93670.1    ACZ94530.1    CH902619    EDV37605.2    AAF46895.5    CH480824    EDW56828.1    CH940648    KRF79986.1    AGB93671.1    APCN01003705    CH916367    EDW02629.1    KRF79987.1    EDO64725.1    CM000158    EDW91842.2    CH954179    EDV56685.2    OUUW01000001    SPP72841.1    CH477647    EAT37836.1    SPP72840.1    CH479181    EDW31920.1    KQ971322    KYB28608.1    CM000071    EAL25075.3    CH963849    EDW74302.1    KYB28607.1    GGFJ01000594    MBW49735.1    KYB28609.1    KA650061    AFP64690.1    AXCN02000917    GFDL01000453    JAV34592.1    ATLV01026183    KE525407    KFB52915.1    GGFM01000487    MBW21238.1    ADMH02000350    ETN66876.1    GGFL01002845    MBW67023.1    GGFK01001026    MBW34347.1    GGFK01001092    MBW34413.1    GGFK01001023    MBW34344.1    GGFM01006488    MBW27239.1    CVRI01000070    CRL07142.1    CH478362    EAT33151.1    JXUM01001669    KQ560126    KXJ84330.1    JXUM01034073    KQ561011    KXJ80046.1    GEZM01051592    JAV74784.1    AAZX01000976    AAZX01004751    KK107256    EZA54284.1    UFQT01001395    SSX30346.1    QOIP01000006    RLU22168.1    GL888384    EGI61903.1    KQ794714    OAD47010.1    KQ980503    KYN15794.1    ADTU01021745    ADTU01021746    ADTU01021747    ADTU01021748    KQ981953    KYN32483.1    KQ978438    KYM93983.1    KK853083    KDR11639.1    KQ434786    KZC05098.1    GL436428    EFN72008.1    KQ976417    KYM89816.1    KQ414583    KOC70769.1   
Pfam
PF00630   Filamin        + More
PF00307   CH
Interpro
IPR001298   Filamin/ABP280_rpt        + More
IPR013783   Ig-like_fold       
IPR017868   Filamin/ABP280_repeat-like       
IPR014756   Ig_E-set       
IPR001715   CH-domain       
IPR036872   CH_dom_sf       
IPR001589   Actinin_actin-bd_CS       
SUPFAM
SSF81296   SSF81296        + More
SSF47576   SSF47576       
Gene 3D
PDB
2J3S     E-value=1.17351e-22,     Score=270

Ontologies

Topology

Length:
1841
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0521100000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1841
 
 

Population Genetic Test Statistics

Pi
249.42181
Theta
178.986735
Tajima's D
1.010613
CLR
0.4872
CSRT
0.668516574171291
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 VSDAQIEDTGIITFPASR 100.00 2e-06
28467696 VPAPGTYNPEK 100.00 2e-04
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