Gene

KWMTBOMO09031

Pre Gene Modal

BGIBMGA007766

Annotation

Glycerophosphodiester_phosphodiesterase_[Operophtera_brumata]

Location

Bomo_Chr15(-):9985778-9987275      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.415

CDS

ATGCGGGGCCGTGTAATAGCTCTATGGTTACTACTTGGAGTATTATGCGCCGGTGGTATAACTGCCATACTGGCCTTCACCCTTAACAGAAATCCAGGATCTTCCTCAATTGATTATGACGCAGATTTCTGTCAGCCGCTCATTATCGCTCACCGTGGAGCCAGTGGCTACGTACCAGAACATACTCTCGGCGCTTACGCTCTTGCTATTGCAATGGGCTCTGAATACATAGAACCGGATGTCGTTATGACGAAAGACGGGCATCTAATAGCGAGACATGACAATGAACTAGGATTGACTACTGATGTCGCAGAGCATCCACAATTTGCTACTAGATATCGGACGCAGTACGTCGACGGGACGTTAGTTAGAGGTTGGTTTACAGAAGACTTCACTCTTGCTGAAATCAAAATGTTGCGTGCTATAGAACGTATACCAGAAATACGCCCGGGTAACGTTAGAATGGACGGCAGCTTTGAAATCCCCACTATGCAAGAAATTATTGATCTAGCAAAAGGCATGGAAATAAGTTACGGACGACGTATTGGTATCTACCCAGAAATCAAACATTCTACCCACTTTCAACATCTGGGTCTCGCTATGGAAAAACCATTAGTAGATCTACTTCACGAAAACGGATACACGGGACCTGAAGCTCCCATTTATATTCAATCGTTCGAAGTCACTAATCTAAAAGAATTGAGTCAGATTACTGGTATCAGGTTAATACAACTGCTTGGAGGAAGAAAAACAGCCCAGCCATATGATCAGGTACAACTTGGTTCTGATCTTACATATGGCGATATGGCTACTCCTGAGGGCCTACGTGACATCGCAAGGTACGCTTATGCAGTTGGACCTGAAAAATCATATATCATACCTCGTGACGAAAATAACAGGCTAGGTCAACCAACCAGTTTTGTTCGTGATGCCCACTCAGTCAATTTAAAAGTGCATCCATACACGTTTCGCGCCGAAAATCTCTACCTGCCCGCAGAACTACAAAGCGATGATCCTTCGCCATCAGCAATCGGAAATTTTAGAGGTGAACTCAAAGCATTTCTGAGTACAGGAATAGACGGCATGTTTTCTGATCAACCTGATATCTCTGTTCAAGTTAGAGGGCCCTGCGAGTGA

Protein

MRGRVIALWLLLGVLCAGGITAILAFTLNRNPGSSSIDYDADFCQPLIIAHRGASGYVPEHTLGAYALAIAMGSEYIEPDVVMTKDGHLIARHDNELGLTTDVAEHPQFATRYRTQYVDGTLVRGWFTEDFTLAEIKMLRAIERIPEIRPGNVRMDGSFEIPTMQEIIDLAKGMEISYGRRIGIYPEIKHSTHFQHLGLAMEKPLVDLLHENGYTGPEAPIYIQSFEVTNLKELSQITGIRLIQLLGGRKTAQPYDQVQLGSDLTYGDMATPEGLRDIARYAYAVGPEKSYIIPRDENNRLGQPTSFVRDAHSVNLKVHPYTFRAENLYLPAELQSDDPSPSAIGNFRGELKAFLSTGIDGMFSDQPDISVQVRGPCE

Uniprot

H9JE19   A0A0L7LFC1   A0A2A4K6M5   A0A2H1WAJ5   A0A194RCK2   A0A194PIY4   + More
Q7YZB5   H9JE20   A0A080VNG0   V6A7J6   A0A1F0IWM2   Q9I6E6   A0A1S1BY80   A0A0F7QIL1   A0A335EPC3   A0A3R8ZAH9   A0A448BWL8   W1MV67   A0A232C3D3   A6UYF0   A0A3S0L777   A0A2R3IZP2   A0A3E1N142   A0A194PQH2   A0A2V2TRS2   A0A1C7BA29   A0A0H2ZKR6   A0A157W2E7   A0A425A963   A0A3M5DVJ6   A0A3N0F5S9   A0A194R8Q9   A0A437BJF0   A0A2N1CZ96   A0A0A1GBD6   A0A365PUD3   A0A172WMC9   A0A2A4K7H7   A0A3T0SLA8   A0A3B8SPF1   A0A3M2I3B4   A0A367ND58   I4JQ44   A0A3S2M4A0   A0A099RWX5   K5YJC0   A0A3R8WMH1   A0A2N8RSI9   W8R3Q9   A0A2N8T4D1   A0A2N8SSR1   A0A3D1B630   A0A2U9NGS3   A0A2E6K086   A0A2E2GAL1   S6L568   A0A2D8IKD2   A0A0T8L3Z1   A0A2U8STA1   A0A0H3Z3Y1   A0A3C1MIN4   A0A2P6KRT3   A0A210XQA1   A0A3B9TC46   A0A2S4AKQ5   A0A3S4SYT6   M2VFN7   A0A1G3DN27   L0GHP6   A0A427G5M7   A0A0D9AFM4   A0A0M2RV16   V4Q3J8   A0A1G3D8D9   A0A2D8A1W9   A0A427ECY4   A0A023WMD9   A0A1M5KZL6   A0A3M2IJ80   A4VRP0   A0A3R8TWK5   A0A2N8S3K8   A0A0T6VHD1   A0A2N8RHV7   A0A1S8F262   A0A391N4Q3   A0A0D7ECN6   A0A2N8SGZ2   F8H514   A0A165VIS1   A0A1C2KAU7   A0A2T5P5J7   A0A448PZI3   A0A1I3QWX9   A0A0I9SGM1   A0A098FTV4   A0A352FY12   A0A1I0SKJ4   A0A3M2H7U9   A0A0D6SZS1  

Pubmed

19121390    26227816    26354079    10984043    20107499    17038190    + More
25523772    30148503    22843599    23405354    24903873    29337314    23929478    23516224    27774985    18495935    21994926   

EMBL

BABH01002481    JTDY01001422    KOB73901.1    NWSH01000076    PCG79887.1    ODYU01007369    + More
SOQ50070.1    KQ460615    KPJ13636.1    KQ459602    KPI93381.1    AB115083    BAC79386.1    CP033832    CDAZ01000003    RXUZ01000036    AYZ76448.1    CEH99014.1    RTV01192.1    CBTR010000002    CDH74733.1    LTTI01000068    OFO89567.1    AE004091    AAG03736.1    LTQU01000126    OHP12311.1    CP033684    CVWF01000555    NFFZ01000028    QHLU01000158    QORE01000549    RJAG01000023    NSVB01000008    LT969520    LS998783    AYW70211.1    CRR41994.1    OTI55503.1    PXC03543.1    RCI73687.1    RNF60245.1    RPY71684.1    SOV26874.1    SZD38978.1    UFMO01000004    UFNQ01000007    UIRQ01000007    SST08458.1    SSU20420.1    SVK38847.1    LR134300    VEE49694.1    ATNK01000015    EQL44373.1    CP000744    ABR83952.1    NSXA01000002    RXTL01000005    RQB93359.1    RTS51764.1    CP027169    AVK07375.1    QVBL01000027    RJAF01000006    RFJ69446.1    RNF56401.1    KPI93380.1    QGSM01000012    PWU39648.1    AXPW01000013    ERV73863.1    CP000438    ABJ15311.1    FKIY01000037    SAJ24768.1    NTBB01000004    SBJW01000004    RQJ46621.1    RWY28987.1    RBSQ01000680    RMS54099.1    RHDU01000004    RNL95415.1    KPJ13635.1    RSAL01000046    RVE50562.1    PJBG01000019    PKG94660.1    AP014655    BAP77872.1    QNTV01000007    RBA58153.1    CP015641    ANF24631.1    PCG79888.1    CP026511    AZZ47104.1    DLWJ01000404    HAB64563.1    RFFM01000001    RMH92704.1    QORI01000003    RCI87550.1    AJXE01000002    EIK54584.1    RVE50563.1    JMFZ01000002    KGK85270.1    AMSL01000081    EKM95077.1    RHRC01000001    RRV71420.1    POUK01000002    PNF77338.1    CP007441    AHL77244.1    POUT01000005    PNG09604.1    POUW01000004    PNG05503.1    DOZV01000067    HCC60819.1    CP029772    AWT12410.1    DMTR01000356    PBJP01000039    HAQ87861.1    MBK59885.1    DOIP01000181    PAJU01000003    HBS78941.1    MAX89656.1    AMVM01000001    EPL64063.1    NZMX01000208    MAL92401.1    CLJU01000010    CJL16652.1    CP027543    AWM60074.1    CP011854    AKN29066.1    DMQC01000067    HAN51987.1    MWRG01006372    PRD29008.1    NFZU01000038    OWG36721.1    DMBZ01000028    HAG17653.1    PPXG01000006    POH82063.1    LR134319    VEF14005.1    AOBS01000074    EMD98478.1    MHZJ01000046    OHC20939.1    CP003071    AGA84839.1    RHQX01000011    RRV48477.1    JYHV01000037    KJH79539.1    JXJL01000001    KKJ99088.1    AOFQ01000066    ESQ97259.1    MHZI01000079    OHC15941.1    NZKN01000284    MAK87938.1    RHQL01000001    RRV14399.1    CP007509    AHY41131.1    FQXA01000001    SHG58217.1    RFFN01000001    RMH99282.1    CP000304    ABP81641.1    RHQM01000006    RRU96015.1    POUN01000002    PNF81223.1    LKKM01000004    KRW69550.1    POUM01000003    PNF60660.1    MQMM01000002    OOE15552.1    BDJA01000001    GCA54129.1    JXXD01000012    KIZ38391.1    POUV01000003    PNG01745.1    CP002881    AEJ07259.1    LWEF01000087    KZX62758.1    MCAL01000101    OCX97625.1    QASN01000021    PTU73018.1    LR134482    VEI30062.1    FORS01000003    SFJ37982.1    JUEC02000142    KJS69104.1    CCYE01000023    CEG53663.1    DNMQ01000085    HBB99594.1    FOJP01000001    SFA40034.1    RFFK01000011    RMH82862.1    JYFT01000013    KIV74087.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000043988    + More
UP000275326    UP000276434    UP000018200    UP000178535    UP000002438    UP000179515    UP000194857    UP000233777    UP000247072    UP000253594    UP000269133    UP000271123    UP000285404    UP000294401    UP000258172    UP000262183    UP000263147    UP000278078    UP000019105    UP000001582    UP000276985    UP000286345    UP000238390    UP000258262    UP000245445    UP000017518    UP000000653    UP000249511    UP000283839    UP000287066    UP000271491    UP000283053    UP000233820    UP000031648    UP000252554    UP000077787    UP000283930    UP000269774    UP000253692    UP000010139    UP000029837    UP000008490    UP000275107    UP000235881    UP000019522    UP000236023    UP000235897    UP000248377    UP000231687    UP000230739    UP000014842    UP000043492    UP000245726    UP000035652    UP000196783    UP000237068    UP000281185    UP000011700    UP000178352    UP000010820    UP000268477    UP000032487    UP000034663    UP000017822    UP000276506    UP000025238    UP000184000    UP000279228    UP000000233    UP000273425    UP000235925    UP000051191    UP000236003    UP000192469    UP000268673    UP000032439    UP000236059    UP000008932    UP000077039    UP000094716    UP000244064    UP000279912    UP000242255    UP000036016    UP000039940    UP000182453    UP000271898    UP000032531   

PRIDE

H9JE19    Q7YZB5    H9JE20    Q9I6E6   

Pfam

PF03009   GDPD

Interpro

IPR030395   GP_PDE_dom        + More
IPR017946   PLC-like_Pdiesterase_TIM-brl       

SUPFAM

SSF51695   SSF51695       

Gene 3D

3.20.20.190    

ProteinModelPortal

H9JE19   A0A0L7LFC1   A0A2A4K6M5   A0A2H1WAJ5   A0A194RCK2   A0A194PIY4   + More
Q7YZB5   H9JE20   A0A080VNG0   V6A7J6   A0A1F0IWM2   Q9I6E6   A0A1S1BY80   A0A0F7QIL1   A0A335EPC3   A0A3R8ZAH9   A0A448BWL8   W1MV67   A0A232C3D3   A6UYF0   A0A3S0L777   A0A2R3IZP2   A0A3E1N142   A0A194PQH2   A0A2V2TRS2   A0A1C7BA29   A0A0H2ZKR6   A0A157W2E7   A0A425A963   A0A3M5DVJ6   A0A3N0F5S9   A0A194R8Q9   A0A437BJF0   A0A2N1CZ96   A0A0A1GBD6   A0A365PUD3   A0A172WMC9   A0A2A4K7H7   A0A3T0SLA8   A0A3B8SPF1   A0A3M2I3B4   A0A367ND58   I4JQ44   A0A3S2M4A0   A0A099RWX5   K5YJC0   A0A3R8WMH1   A0A2N8RSI9   W8R3Q9   A0A2N8T4D1   A0A2N8SSR1   A0A3D1B630   A0A2U9NGS3   A0A2E6K086   A0A2E2GAL1   S6L568   A0A2D8IKD2   A0A0T8L3Z1   A0A2U8STA1   A0A0H3Z3Y1   A0A3C1MIN4   A0A2P6KRT3   A0A210XQA1   A0A3B9TC46   A0A2S4AKQ5   A0A3S4SYT6   M2VFN7   A0A1G3DN27   L0GHP6   A0A427G5M7   A0A0D9AFM4   A0A0M2RV16   V4Q3J8   A0A1G3D8D9   A0A2D8A1W9   A0A427ECY4   A0A023WMD9   A0A1M5KZL6   A0A3M2IJ80   A4VRP0   A0A3R8TWK5   A0A2N8S3K8   A0A0T6VHD1   A0A2N8RHV7   A0A1S8F262   A0A391N4Q3   A0A0D7ECN6   A0A2N8SGZ2   F8H514   A0A165VIS1   A0A1C2KAU7   A0A2T5P5J7   A0A448PZI3   A0A1I3QWX9   A0A0I9SGM1   A0A098FTV4   A0A352FY12   A0A1I0SKJ4   A0A3M2H7U9   A0A0D6SZS1  

PDB

1YDY     E-value=5.02056e-42,     Score=430

KEGG

101740291    no KO assigned | (RefSeq) glycerophosphodiester phosphodiesterase GDPD6-like

GO

GO:0006629   GO:0008081   GO:0016021   GO:0008889   GO:0042597   GO:0016020   GO:0042626   GO:0016887   GO:0005254   GO:0006811   GO:0016876   GO:0043039  

SignalP

Position:   1 - 22,         Likelihood:  0.721540

 

 

Length:

378

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.54632

Exp number, first 60 AAs:

22.51724

Total prob of N-in:

0.99513

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  378

 

 

Pi

188.526691

Theta

180.233177

Tajima's D

0.069513

CLR

22.510436

CSRT

0.387080645967702

Interpretation

Uncertain