SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09030  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007767
Annotation
glycerophosphoryl_diester_phosphodiesterase_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.259
 

Sequence

CDS
ATGAAAATCTTCGGGCTGTTGGTGCTTTCCTTTAGCACCGTGGGGATCACTTTTGGAATTCCAGTAAATGAGAACCTTGATTTCAATTCTGAATTCTTAAACTCAGATTTCTGTTCGCCACTAATCATTGCCCACCGCGGAGCCAGCGGATATGTCCCCGAACACACCCTAGGTTCTTATGCTCTCAGTATAACCATGGGAGCTGATTACATCGAACCTGATCTGGTAATGACGAAAGACGGGGTACTTGTGGCCCGACATGACAACGAACTGAGTTTGACAACCGACGTCGCAAGTCGTATTGAATTCGCTACACGCAACCGGACTCAAACAGTGGACGGATCTGCTATCACCGGTTGGTTCACGGAAGATTTTACACTGGCCGAAATAAAAACGTTACGAGCTAGAGAACGCATACCAGATATCAGAGCTGGCAACGCACGTATGGATGGCACCTTCACGATTCCTACGTTTCAAGAAATCATTAGTCTGGCGAAAGGTCTGCAAAAAAGTCAAAAAAGAACTATTGGAATTTATCCAGAAATAAAACATAGCACACATTTTAAGAAACTAGGTCTGGCAATGGAGGAGCCTGTTGTGAACATACTCCATAAAAACGGATACCGTGACCCATCCGCACCGGTTTATATTCAATCGTTCGAAGTTACCAATTTAAAAGAACTTAAAACAAAGACCAGGCTTCGTTTGTTACAACTATTCGAGAGTGATAAATCTCTACAGCCTTTCGACCAACTAGAACTGGGAACTAATCTTACGTATGGAGAAATGGCTTCACAAGAAGGCTTGAAGGAAGTCGCCAAATACGCACACGCAGCCGGTCCTGACAAAAGCTACATAATTCCCCGCGATACAGACAATCGATTAGGTGCTAAGACTACATTTGTAGACGATGCACATGAAGCAGGCCTTAAGGTCCACCCGTATACATTTCGCGCCGAGAACGCATTTCTACCAACGGAATTCCGGAGTAATGAATCAGAATCGAATAGTGGAGATTTCGAAGCTGAATTAAGAGCGTATTTGGATGCAGGGATCGATGGTCTGTTCTCAGATCAGCCGGACAGAGTGGCTCGTCTTCGAGGACCTTGTTTGAAATAG
Protein
MKIFGLLVLSFSTVGITFGIPVNENLDFNSEFLNSDFCSPLIIAHRGASGYVPEHTLGSYALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQEIISLAKGLQKSQKRTIGIYPEIKHSTHFKKLGLAMEEPVVNILHKNGYRDPSAPVYIQSFEVTNLKELKTKTRLRLLQLFESDKSLQPFDQLELGTNLTYGEMASQEGLKEVAKYAHAAGPDKSYIIPRDTDNRLGAKTTFVDDAHEAGLKVHPYTFRAENAFLPTEFRSNESESNSGDFEAELRAYLDAGIDGLFSDQPDRVARLRGPCLK

Summary

EMBL
BABH01002481    AB115083    BAC79386.1    RSAL01000046    RVE50563.1    KQ459602    + More
KPI93380.1    LTTI01000068    OFO89567.1    AE004091    AAG03736.1    LTQU01000126    OHP12311.1    CP033684    CVWF01000555    NFFZ01000028    QHLU01000158    QORE01000549    RJAG01000023    NSVB01000008    LT969520    LS998783    AYW70211.1    CRR41994.1    OTI55503.1    PXC03543.1    RCI73687.1    RNF60245.1    RPY71684.1    SOV26874.1    SZD38978.1    UFMO01000004    UFNQ01000007    UIRQ01000007    SST08458.1    SSU20420.1    SVK38847.1    LR134300    VEE49694.1    CBTR010000002    CDH74733.1    ATNK01000015    EQL44373.1    CP000744    ABR83952.1    KQ460615    KPJ13636.1    CP033832    CDAZ01000003    RXUZ01000036    AYZ76448.1    CEH99014.1    RTV01192.1    QGSM01000012    PWU39648.1    KPJ13635.1    QVBL01000027    RJAF01000006    RFJ69446.1    RNF56401.1    AXPW01000013    ERV73863.1    CP000438    ABJ15311.1    FKIY01000037    SAJ24768.1    NTBB01000004    SBJW01000004    RQJ46621.1    RWY28987.1    NSXA01000002    RXTL01000005    RQB93359.1    RTS51764.1    CP027169    AVK07375.1    KPI93381.1    NWSH01000076    PCG79888.1    RBSQ01000680    RMS54099.1    RHDU01000004    RNL95415.1    PCG79887.1    JTDY01001422    KOB73901.1    AMSL01000081    EKM95077.1    POUK01000002    PNF77338.1    AJXE01000002    EIK54584.1    QASN01000021    PTU73018.1    JMFZ01000002    KGK85270.1    RVE50562.1    JYHV01000037    KJH79539.1    MQMM01000002    OOE15552.1    DOZV01000067    HCC60819.1    AOBS01000074    EMD98478.1    QORI01000003    RCI87550.1    DMTR01000356    PBJP01000039    HAQ87861.1    MBK59885.1    RFFM01000001    RMH92704.1    CP027543    AWM60074.1    RHQX01000011    RRV48477.1    CP011854    AKN29066.1    DMQC01000067    HAN51987.1    AMVM01000001    EPL64063.1    NFZU01000038    OWG36721.1    CLJU01000010    CJL16652.1    DMBZ01000028    HAG17653.1    LR134319    VEF14005.1    CP002881    AEJ07259.1    CP026511    AZZ47104.1    DLWJ01000404    HAB64563.1    MHZJ01000046    OHC20939.1    RFFN01000001    RMH99282.1    BDJA01000001    GCA54129.1    PPXG01000006    POH82063.1    ODYU01007369    SOQ50070.1    NZKN01000284    MAK87938.1    CP011835    ASL25194.1    CP007509    AHY41131.1    LKKM01000004    KRW69550.1    POUM01000003    PNF60660.1    NZMX01000208    MAL92401.1    RHRC01000001    RRV71420.1    CP015641    ANF24631.1    FQXA01000001    SHG58217.1    CP000304    ABP81641.1    PJBG01000019    PKG94660.1    AP014655    BAP77872.1    QNTV01000007    RBA58153.1    JXJL01000001    KKJ99088.1    AOFQ01000066    ESQ97259.1    MHZI01000079    OHC15941.1    FNFD01000013    SDL01879.1    RHQL01000001    RRV14399.1    POUV01000003    PNG01745.1    CP007441    AHL77244.1    LWEF01000087    KZX62758.1    CP010415    AJE19901.1    MUJY01000024    PAU66622.1    POUT01000005    PNG09604.1    FNSC01000001    SED17430.1    DNMQ01000085    HBB99594.1    POUW01000004    PNG05503.1    MCAL01000101    OCX97625.1    CP029772    AWT12410.1    CP003071    AGA84839.1    LR134482    VEI30062.1    FOJP01000001    SFA40034.1    JXXD01000012    KIZ38391.1    DORR01000068    HBX55555.1    DOIP01000181    PAJU01000003    HBS78941.1    MAX89656.1    LXJQ01000001    OEC47370.1    RHQM01000006    RRU96015.1   
Proteomes
UP000005204    UP000283053    UP000053268    UP000178535    UP000002438    UP000179515    + More
UP000194857    UP000233777    UP000247072    UP000253594    UP000269133    UP000271123    UP000285404    UP000294401    UP000258172    UP000262183    UP000263147    UP000278078    UP000018200    UP000019105    UP000001582    UP000053240    UP000043988    UP000275326    UP000276434    UP000245445    UP000258262    UP000017518    UP000000653    UP000249511    UP000283839    UP000287066    UP000276985    UP000286345    UP000238390    UP000218220    UP000271491    UP000037510    UP000008490    UP000235881    UP000010139    UP000244064    UP000029837    UP000032487    UP000192469    UP000011700    UP000253692    UP000231687    UP000269774    UP000245726    UP000268477    UP000035652    UP000014842    UP000196783    UP000043492    UP000281185    UP000008932    UP000283930    UP000178352    UP000279228    UP000268673    UP000237068    UP000242172    UP000025238    UP000051191    UP000236003    UP000275107    UP000077787    UP000184000    UP000000233    UP000233820    UP000031648    UP000252554    UP000034663    UP000017822    UP000198706    UP000276506    UP000236059    UP000019522    UP000077039    UP000068210    UP000217600    UP000236023    UP000242849    UP000235897    UP000094716    UP000248377    UP000010820    UP000279912    UP000182453    UP000032439    UP000230739    UP000094593    UP000273425   
Pfam
PF03009   GDPD
Interpro
IPR017946   PLC-like_Pdiesterase_TIM-brl        + More
IPR030395   GP_PDE_dom       
SUPFAM
SSF51695   SSF51695       
Gene 3D
PDB
1YDY     E-value=7.21499e-37,     Score=386

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.990079
 
 
Length:
372
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.91820999999999
Exp number, first 60 AAs:
5.91584
Total prob of N-in:
0.30514
outside
1  -  372
 
 

Population Genetic Test Statistics

Pi
169.494799
Theta
128.03526
Tajima's D
0.476446
CLR
0.234156
CSRT
0.509424528773561
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
20822545 KLGLAMEEPVVNILHK 100.00 2e-07
28556443 LGLAMEEPVVNILHK 100.00 2e-06
28556443 LGLAMEEPVVNILHK 100.00 2e-06
20822545 SNESESNSGDFEAELR 100.00 7e-05
20822545 HDNELSLTTDVASR 100.00 9e-05
20822545 YAHAAGPDKSYIIPR 100.00 3e-04
28556443 AENAFLPTEFR 100.00 3e-04
28556443 EKVDEPYWPSLTSDK 100.00 3e-04
20822545 LGLAMEEPVVNILHK 100.00 0.001
20822545 LRLLQLFESDK 100.00 0.008
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