Gene

KWMTBOMO09029  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007768

Annotation

PREDICTED:_UDP-glucuronic_acid_decarboxylase_1_isoform_X2_[Papilio_polytes]

Location

Bomo_Chr15(-):9956097-9966765      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.796 Mitochondrial   Reliability : 1.331

CDS

ATGAATTTGCAATCATCAAATGAAGTAACAAGTGATGATACAAAACATGAGCTTGCTGAAGCAAAAAATCGAATACAAGAATTAGAAAAAAAGATTGCTATTTTAGAAGGAAGAATGCCTCAAAAGTACCCTGAAGTAAAGTTTTTAGGATATAAAGAAAGGAGAAGAATCTTAGTGACAGGAGGAGCTGGTTTTGTTGGCTCACATTTAGTTGATATTCTCATGATGAAAGGTCATGAAGTCATTGTAGTCGACAATTTCTTTACTGGCCGGAAGAGAAACGTTGAGCATTGGTTCGGACATCGTAATTTTGAAATGATTCATCATGATATCGTCAATCCGTTGTATGTTGAAGCAGACGAAATATATCATTTAGCTAGTCCTGCCAGCCCACCGCATTATATGCAAAATCCTGTTAAAACAATCAAGACTAATACTCTAGGAACTATAAATATGTTAGGTCTCGCCAGACGCGTCGGCGCTAGAATACTGATCGCAAGCACTTCAGAAGTATATGGAGATCCTTTGGTGCATCCACAACCTGAATCTTATTGGGGCCATGTTAATCCAATTGGCCCTCGAGCGTGTTACGACGAAGGCAAGAGAGTTGCAGAGACACTGGCGTATTCGTACGCAAAACAAGAGAAAGTCGACGTGAGAGTCGCTAGGATATTCAACACGTACGGACCTAGAATGCATGTTTCAGACGGTCGTGTAGTTTCTAATTTCATAATGCAAGCTTTACAGAATTTAACTATTACAGTTTATGGTAACGGAAAACAGACCCGATCGTTCTGCTACGTGTCTGACCTTGTCGATGGACTGCTAGGCTTAATGGCTTCTAGTTATACATTACCTGTTAACATTGGGAACCCGGTAGAACATACTATAGAAGAATTTGCAATGATCATAAAGAATCTAGTCCCCGGGTGCCGCAGTACTGTCGCCACGGGAGCCGCGGTCGAGGACGACCCCCAGCGGCGCCGACCGGACATTGCAGTGGCGGAGGCCCATTTACACTGGAAACCTAAAGTAAGCCTACAGGAAGGCTTGCAAAGAACCATCGACTATTTCAAAGAAGAATTATCAAGGACTACGCTTTACAATAATCAAACTTATGTAGATATGAAAGTCAAACATCATTAG

Protein

MNLQSSNEVTSDDTKHELAEAKNRIQELEKKIAILEGRMPQKYPEVKFLGYKERRRILVTGGAGFVGSHLVDILMMKGHEVIVVDNFFTGRKRNVEHWFGHRNFEMIHHDIVNPLYVEADEIYHLASPASPPHYMQNPVKTIKTNTLGTINMLGLARRVGARILIASTSEVYGDPLVHPQPESYWGHVNPIGPRACYDEGKRVAETLAYSYAKQEKVDVRVARIFNTYGPRMHVSDGRVVSNFIMQALQNLTITVYGNGKQTRSFCYVSDLVDGLLGLMASSYTLPVNIGNPVEHTIEEFAMIIKNLVPGCRSTVATGAAVEDDPQRRRPDIAVAEAHLHWKPKVSLQEGLQRTIDYFKEELSRTTLYNNQTYVDMKVKHH

Uniprot

H9JE21   A0A3S2LNM3   A0A2H1VJ71   A0A2A4K736   A0A212EUI2   A0A194PK32   + More
A0A182FPF6   A0A182L704   A0A182RX71   W5JFY7   A0A182PS67   A0A2M4CHL1   A0A182MG10   A0A2M3Z770   A0A182ID60   A0A2M4AIC8   A0A2M4AI85   Q7QAZ6   A0A182XG14   A0A182XX25   A0A2M4AID7   A0A2M4AIS5   A0A2M4BLF8   A0A2M4BLI6   A0A2M4BM40   A0A182TUH9   A0A1Q3G2J8   A0A182W174   A0A182VIX4   A0A2P8YU34   A0A1L8E2D9   A0A182NCX1   A0A1L8E1X4   A0A182Q1I4   A0A2J7RJ47   A0A1B0C9X2   A0A182JUK5   A0A182JET1   A0A023ETQ3   Q176W8   A0A084WP06   A0A067QXX8   Q176W9   D7EL37   A0A0K8WGL0   A0A1W4WU98   A0A034VY56   A0A232F1Y6   W8BUR8   E9GL34   A0A0L0BS88   K7IQZ2   B3M9M4   U5EXQ8   B4J221   A0A0P5NAB9   E2AEW9   A0A0P5SNP8   B4PCU0   B4HJD6   A0A0J7L078   Q9VSE8   B4QLJ2   E2BR94   T1PHL1   A0A1I8NMN5   A0A1I8NMN0   B4LCC0   A0A026WW16   B4L927   B4N4C6   B3NF42   A0A1B0FKT8   A0A1A9UHB3   A0A1B0BMW8   A0A1A9ZSB8   A0A3B0KTN6   B4H177   A0A2A3EIT7   A0A088AAG1   A0A1A9XD44   Q29FJ1   A0A1W4UFC2   A0A0M4EKY4   A0A1A9WGG9   T1I6Q9   A0A0L7R4K8   F4W8W3   A0A3L8D9E9   A0A1Y1LYX0   A0A151WZN4   A0A1B6DQ87   A0A195CVA6   A0A1D2NIN6   A0A158NHH4   A0A195BVY3   J3JUJ3   A0A2J7RJ48   A0A1J1I9I5   A0A2S2Q916  

Pubmed

19121390    22118469    26354079    20966253    20920257    23761445    + More
12364791    14747013    17210077    25244985    29403074    24945155    17510324    24438588    24845553    18362917    19820115    25348373    28648823    24495485    21292972    26108605    20075255    17994087    20798317    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25315136    24508170    30249741    15632085    21719571    28004739    27289101    21347285    22516182    23537049   

EMBL

BABH01002483    BABH01002484    RSAL01000046    RVE50564.1    ODYU01002850    SOQ40846.1    + More
NWSH01000076    PCG79889.1    AGBW02012389    OWR45143.1    KQ459602    KPI93378.1    ADMH02001267    ETN63287.1    GGFL01000615    MBW64793.1    AXCM01006078    GGFM01003603    MBW24354.1    APCN01005034    GGFK01007176    MBW40497.1    GGFK01007175    MBW40496.1    AAAB01008880    EAA08612.5    GGFK01007186    MBW40507.1    GGFK01007187    MBW40508.1    GGFJ01004769    MBW53910.1    GGFJ01004786    MBW53927.1    GGFJ01004872    MBW54013.1    GFDL01001022    JAV34023.1    PYGN01000359    PSN47752.1    GFDF01001409    JAV12675.1    GFDF01001410    JAV12674.1    AXCN02001559    NEVH01003007    PNF40854.1    AJWK01002981    GAPW01001804    JAC11794.1    CH477381    EAT42204.1    ATLV01024805    KE525361    KFB51950.1    KK853225    KDR09682.1    EAT42203.1    DS497802    EFA11835.1    GDHF01003204    GDHF01002105    JAI49110.1    JAI50209.1    GAKP01012159    GAKP01012157    GAKP01012154    GAKP01012152    JAC46795.1    NNAY01001282    OXU24499.1    GAMC01001455    JAC05101.1    GL732550    EFX79862.1    JRES01001437    KNC22930.1    CH902618    EDV39030.1    GANO01002424    JAB57447.1    CH916366    EDV95946.1    GDIQ01151929    JAK99796.1    GL438952    EFN68014.1    GDIQ01206666    GDIP01140896    JAK45059.1    JAL62818.1    CM000159    EDW93844.1    CH480815    EDW40660.1    LBMM01001601    KMQ96036.1    AE014296    AY051913    AAF50474.1    AAK93337.1    CM000363    CM002912    EDX09652.1    KMY98299.1    GL449936    EFN81783.1    KA648256    AFP62885.1    CH940647    EDW68765.1    KK107078    QOIP01000011    EZA60192.1    RLU16742.1    CH933816    EDW17202.1    CH964095    EDW79000.2    CH954178    EDV50384.1    CCAG010001046    JXJN01017069    OUUW01000012    SPP87258.1    CH479202    EDW30054.1    KZ288236    PBC31384.1    CH379067    EAL31263.2    CP012525    ALC44926.1    ACPB03010138    ACPB03010139    KQ414657    KOC65696.1    GL887973    EGI69355.1    RLU16772.1    GEZM01046440    JAV77235.1    KQ982648    KYQ53227.1    GEDC01009467    JAS27831.1    KQ977259    KYN04565.1    LJIJ01000032    ODN04975.1    ADTU01001682    KQ976398    KYM92742.1    APGK01037400    BT126907    KB740948    AEE61869.1    ENN77320.1    PNF40856.1    CVRI01000045    CRK96943.1    GGMS01004857    MBY74060.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053268    UP000069272    + More
UP000075882    UP000075900    UP000000673    UP000075885    UP000075883    UP000075840    UP000007062    UP000076407    UP000076408    UP000075902    UP000075920    UP000075903    UP000245037    UP000075884    UP000075886    UP000235965    UP000092461    UP000075881    UP000075880    UP000008820    UP000030765    UP000027135    UP000007266    UP000192223    UP000215335    UP000000305    UP000037069    UP000002358    UP000007801    UP000001070    UP000000311    UP000002282    UP000001292    UP000036403    UP000000803    UP000000304    UP000008237    UP000095301    UP000095300    UP000008792    UP000053097    UP000279307    UP000009192    UP000007798    UP000008711    UP000092444    UP000078200    UP000092460    UP000092445    UP000268350    UP000008744    UP000242457    UP000005203    UP000092443    UP000001819    UP000192221    UP000092553    UP000091820    UP000015103    UP000053825    UP000007755    UP000075809    UP000078542    UP000094527    UP000005205    UP000078540    UP000019118    UP000183832   

PRIDE

H9JE21    Q9VSE8   

Pfam

PF16363   GDP_Man_Dehyd        + More
PF00078   RVT_1
PF00005   ABC_tran
PF00664   ABC_membrane
PF07776   zf-AD
PF00096   zf-C2H2
PF12937   F-box-like
PF12125   Beta-TrCP_D
PF00400   WD40
PF01092   Ribosomal_S6e

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR016040   NAD(P)-bd_dom       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
IPR036640   ABC1_TM_sf       
IPR027417   P-loop_NTPase       
IPR011527   ABC1_TM_dom       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR003593   AAA+_ATPase       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR021977   Beta-TrCP_D       
IPR001377   Ribosomal_S6e       
IPR001810   F-box_dom       
IPR017986   WD40_repeat_dom       
IPR018282   Ribosomal_S6e_CS       
IPR001680   WD40_repeat       
IPR036047   F-box-like_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF51735   SSF51735        + More
SSF56219   SSF56219       
SSF52540   SSF52540       
SSF90123   SSF90123       
SSF57667   SSF57667       
SSF50978   SSF50978       
SSF81383   SSF81383       

Gene 3D

3.60.10.10     1.20.1560.10     2.130.10.10    

ProteinModelPortal

H9JE21   A0A3S2LNM3   A0A2H1VJ71   A0A2A4K736   A0A212EUI2   A0A194PK32   + More
A0A182FPF6   A0A182L704   A0A182RX71   W5JFY7   A0A182PS67   A0A2M4CHL1   A0A182MG10   A0A2M3Z770   A0A182ID60   A0A2M4AIC8   A0A2M4AI85   Q7QAZ6   A0A182XG14   A0A182XX25   A0A2M4AID7   A0A2M4AIS5   A0A2M4BLF8   A0A2M4BLI6   A0A2M4BM40   A0A182TUH9   A0A1Q3G2J8   A0A182W174   A0A182VIX4   A0A2P8YU34   A0A1L8E2D9   A0A182NCX1   A0A1L8E1X4   A0A182Q1I4   A0A2J7RJ47   A0A1B0C9X2   A0A182JUK5   A0A182JET1   A0A023ETQ3   Q176W8   A0A084WP06   A0A067QXX8   Q176W9   D7EL37   A0A0K8WGL0   A0A1W4WU98   A0A034VY56   A0A232F1Y6   W8BUR8   E9GL34   A0A0L0BS88   K7IQZ2   B3M9M4   U5EXQ8   B4J221   A0A0P5NAB9   E2AEW9   A0A0P5SNP8   B4PCU0   B4HJD6   A0A0J7L078   Q9VSE8   B4QLJ2   E2BR94   T1PHL1   A0A1I8NMN5   A0A1I8NMN0   B4LCC0   A0A026WW16   B4L927   B4N4C6   B3NF42   A0A1B0FKT8   A0A1A9UHB3   A0A1B0BMW8   A0A1A9ZSB8   A0A3B0KTN6   B4H177   A0A2A3EIT7   A0A088AAG1   A0A1A9XD44   Q29FJ1   A0A1W4UFC2   A0A0M4EKY4   A0A1A9WGG9   T1I6Q9   A0A0L7R4K8   F4W8W3   A0A3L8D9E9   A0A1Y1LYX0   A0A151WZN4   A0A1B6DQ87   A0A195CVA6   A0A1D2NIN6   A0A158NHH4   A0A195BVY3   J3JUJ3   A0A2J7RJ48   A0A1J1I9I5   A0A2S2Q916  

PDB

2B69     E-value=1.07368e-134,     Score=1229

KEGG

101740507    K08678 UDP-glucuronate decarboxylase [EC:4.1.1.35] | (RefSeq) UDP-glucuronic acid decarboxylase 1

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005524   GO:0042626   GO:0003676   GO:0008270   GO:0005634   GO:0005737   GO:0048040   GO:0070403   GO:0003735   GO:0006412   GO:0046983   GO:0005840  

Length:

381

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.25234000000001

Exp number, first 60 AAs:

0.65298

Total prob of N-in:

0.17787

outside

1  -  381

 

 

Pi

205.909226

Theta

163.455633

Tajima's D

0.895529

CLR

0.00465

CSRT

0.630818459077046

Interpretation

Uncertain