Silkworm Genome Informatics Database

Gene

KWMTBOMO09023

Pre Gene Modal

BGIBMGA007764

Annotation

PREDICTED:_uncharacterized_protein_LOC105391725_isoform_X1_[Plutella_xylostella]

Location

Bomo_Chr15(+):9879546-9882426 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.412 Nuclear Reliability : 1.703

CDS

ATGTCAGCTAGCGGTGCTACTGTCGATGGAGACGATCTCCCGAAGCTGAAGCGCGAGGCGAAGGAGGGCGGGTCGCGGCTGGTGGCGGCGCTGCGCGGCTCGCGGCTGGTCGCATGGCGCCACGTGCACGAGCGCGCCTTCTGGACCGCGCTGCGCCTCGCGCTGCCGCTGCCGCCGCGGGGACAGACGAAGCCGAACTTAACTGAAACCGACGCGAAGAAAACGAATACAGGCAGTTTGACGGCGCTCGTTTAG

Protein

MSASGATVDGDDLPKLKREAKEGGSRLVAALRGSRLVAWRHVHERAFWTALRLALPLPPRGQTKPNLTETDAKKTNTGSLTALV

Uniprot

H9JE17 A0A2A4K7K5 A0A2H1VX03 A0A212FFY9 A0A437BJE6

Pubmed

19121390 22118469

EMBL

BABH01002490 NWSH01000076 PCG79894.1 ODYU01004966 SOQ45371.1 AGBW02008743 + More
OWR52649.1 RSAL01000046 RVE50567.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000283053

PRIDE

H9JE17

Pfam

PF00047 ig + More
PF07679 I-set

Interpro

IPR007110   Ig-like_dom        + More
IPR035897   Toll_tir_struct_dom_sf
IPR013783   Ig-like_fold
IPR036179   Ig-like_dom_sf
IPR015621   IL-1_rcpt_fam
IPR003599   Ig_sub
IPR013151   Immunoglobulin
IPR013098   Ig_I-set
IPR000157   TIR_dom

SUPFAM

SSF52200 SSF52200 + More
SSF48726 SSF48726

Gene 3D

2.60.40.10 3.40.50.10140

ProteinModelPortal

H9JE17 A0A2A4K7K5 A0A2H1VX03 A0A212FFY9 A0A437BJE6

KEGG

101741113 no KO assigned | (RefSeq) fibroblast growth factor receptor 4-like

GO

PANTHER

PTHR11890

Length:

84

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000960000000000001

Exp number, first 60 AAs:

0.000950000000000001

Total prob of N-in:

0.20541

outside

1 - 84

Pi

36.575638

Theta

40.36401

Tajima's D

-1.665642

CLR

735.290909

CSRT

0.039798010099495

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics