Silkworm Genome Informatics Database

Gene

KWMTBOMO09022

Pre Gene Modal

BGIBMGA007764

Annotation

PREDICTED:_uncharacterized_protein_LOC106117394_[Papilio_xuthus]

Location

Bomo_Chr15(+):9826676-9878600 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.192 PlasmaMembrane Reliability : 1.867

CDS

ATGTGGTGGGTAGTCGTGGTGGCGGCGGTGGCCAGCGCGAGTCGTGCGCACTCCGCCAGCTACTGCTCTGTGAACACGTTCACCACGAACGCCACGTGGATGCAGTTTACCAAGGAACCGGTACCATTCGAATACGGCTTCGAAGACAAGTTCAAGAGCATTCATTGTTGCGTCAGAGGATACAGAAGTATCGAATGGTTCAAAGACGGTGTCGCGTATCCGTGGTCGGCTGGCGTATCGAATCTCATCCTGTATCCGGAAGCTGCAAATCAGACGCTTTACACACGGCGGGCATCGCGCGCAGACTCTGGCAACTACACCTGCCGACTCAGCAACGAAACCCACATACAGACGCACACGGTCAGGCTCGATATACTAGAAAAATCGACAGACACACCGAGAACAATGTTCATTACGAAAGACCAGTGGGTGGAGGAGGGGGGGCATCTGCGTCTGTACTGCGAAGCGCTCATAGGTCGTTCGAATTTAGCAGATGCCCGTAGCGACCTCCGCTGGAGGAAGGTCTGGTCGAACGGCACCGAGGGAGACTTGCCTCCCACGCAAACCGAAATCAAAACCTCCCGCGACGACGTACAGGATATAATCGGTTCGTATTTGATTAACGAGCGCGTGGCGGCCCAGGACTACGGGATGTACGTGTGCCTGATCCACAGCAACGACGTCGAATCCCGGAGCTACGTAACGATACATTACACACACGCTCCCGGTGGTGCCGAGAACGGGTGGTGCGGCGGATCTCAGGTACCGTGGCGGGTGCTGGCGGCGGGTGGCGCGGGGGGTGCACTGCTGCTGCTGACCATGGTCGCCTTGCACCGCCGCTGCACGCCACGACTACTGCTCGCTGTGAGACACGCACGGGCCAGAGCGCAGACCACTGCACACACTGCTAGAGTACTGGAGAAGGAGTTCGACGTGCTGGTCTGCTGGACGGCGGTGGACGCGGAGCTGGTCCGGGGCGCGCTCCTCCCGACGCTCGTGCTCAAGTACCACTACCGCGTGCACGCGCTGCAGCTCTCCACGCAACCTGACCTCTGGTACAGCGAGCTGGTGGGCGAGGCGGCTCGGTGCCGGTCGCTGGTGGCGGTGCTGTCGCCGGCGCAGTACTCGCCGCAGCAGCTGCTCACCGCGCTCAGCCAGCTGCGGGCCCTACCCCTGCCGCCCGTCGTCGTCCTACTACAGGTAACGAGCAGGAAACTTGAACTAGTGTTGTAA

Protein

MWWVVVVAAVASASRAHSASYCSVNTFTTNATWMQFTKEPVPFEYGFEDKFKSIHCCVRGYRSIEWFKDGVAYPWSAGVSNLILYPEAANQTLYTRRASRADSGNYTCRLSNETHIQTHTVRLDILEKSTDTPRTMFITKDQWVEEGGHLRLYCEALIGRSNLADARSDLRWRKVWSNGTEGDLPPTQTEIKTSRDDVQDIIGSYLINERVAAQDYGMYVCLIHSNDVESRSYVTIHYTHAPGGAENGWCGGSQVPWRVLAAGGAGGALLLLTMVALHRRCTPRLLLAVRHARARAQTTAHTARVLEKEFDVLVCWTAVDAELVRGALLPTLVLKYHYRVHALQLSTQPDLWYSELVGEAARCRSLVAVLSPAQYSPQQLLTALSQLRALPLPPVVVLLQVTSRKLELVL

Uniprot

H9JE17 A0A2A4K7Y6 A0A437BJE6 A0A194PJ75 A0A2H1VX03 A0A139WGY2 + More
A0A1W4WX96 A0A1Y1L514 K7JU20 A0A087ZW95 A0A1B6DGY4 A0A1B6M936 A0A3L8DIM5 A0A1B6FZX0 A0A1B6HQY1 E2A9S7 A0A158NLW7

Pubmed

19121390 26354079 18362917 19820115 28004739 20075255 + More
30249741 20798317 21347285

EMBL

BABH01002490 NWSH01000076 PCG79893.1 RSAL01000046 RVE50567.1 KQ459602 + More
KPI93377.1 ODYU01004966 SOQ45371.1 KQ971343 KYB27166.1 GEZM01064647 JAV68674.1 AAZX01002657 AAZX01004490 AAZX01004799 AAZX01008136 AAZX01008679 GEDC01012342 JAS24956.1 GEBQ01011863 GEBQ01007548 JAT28114.1 JAT32429.1 QOIP01000007 RLU20305.1 GECZ01014166 JAS55603.1 GECU01030617 JAS77089.1 GL437919 EFN69814.1 ADTU01019779 ADTU01019780 ADTU01019781 ADTU01019782 ADTU01019783 ADTU01019784 ADTU01019785

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268 UP000007266 UP000192223 + More
UP000002358 UP000005203 UP000279307 UP000000311 UP000005205

PRIDE

H9JE17

Pfam

PF07679   I-set        + More
PF00047   ig
PF01582   TIR
PF13676   TIR_2

Interpro

IPR007110   Ig-like_dom        + More
IPR035897   Toll_tir_struct_dom_sf
IPR013783   Ig-like_fold
IPR036179   Ig-like_dom_sf
IPR015621   IL-1_rcpt_fam
IPR013098   Ig_I-set
IPR013151   Immunoglobulin
IPR003599   Ig_sub
IPR000157   TIR_dom
IPR003598   Ig_sub2

SUPFAM

SSF52200 SSF52200 + More
SSF48726 SSF48726

Gene 3D

2.60.40.10 3.40.50.10140

ProteinModelPortal

H9JE17 A0A2A4K7Y6 A0A437BJE6 A0A194PJ75 A0A2H1VX03 A0A139WGY2 + More
A0A1W4WX96 A0A1Y1L514 K7JU20 A0A087ZW95 A0A1B6DGY4 A0A1B6M936 A0A3L8DIM5 A0A1B6FZX0 A0A1B6HQY1 E2A9S7 A0A158NLW7

PDB

1RY7 E-value=0.000206609, Score=106

KEGG

101741113 no KO assigned | (RefSeq) fibroblast growth factor receptor 4-like

GO

GO:0007165 GO:0016021 GO:0005515 GO:0005576 GO:0008270 GO:0046872 GO:0005794 GO:0008565 GO:0015031 GO:0030123 GO:0016876 GO:0043039

PANTHER

PTHR11890

SignalP

Position: 1 - 18, Likelihood: 0.997851

Length:

410

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.77208

Exp number, first 60 AAs:

0.29528

Total prob of N-in:

0.12641

outside

1 - 410

Pi

226.132627

Theta

185.208618

Tajima's D

0.738278

CLR

0.19737

CSRT

0.579821008949553

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics