SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09018
Pre Gene Modal
BGIBMGA007761
Annotation
PREDICTED:_uncharacterized_protein_LOC101741253_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.567
 

Sequence

CDS
ATGGAGGAAATTATTGATGATAATAAAGTTATTGAAAACGATAACGATTTGGAGCCTGAATATAAATATAATTTCATTAACAGACCATGGGACGATCGTTCAATAAAAAGCAAAGTTTGTCTTGTAGCTTTATTAATTGCAATATTTACAGCTACTATGGCCTGTGTCATTAATAACTTCGTAATGCATTATCGAAGCTTCAATTCTGCTACGAACTTAAACAGTGAAATAAACTGCTTTAGAATCAAATTAAATGAGTATCCATTTGTCGCAAGAATACATTCGTTATCGTCGAAGAAATTAATATGTGTCGGAGCGGTGGTTAGCCAGACTTCTGTCTTAGCAAGTGGAGTTTGCGTACAAAACGGTCCGATTTTGGCCTACATGGGAAGCAATGCTAATTCTCGCTGCAAGAAAGGTTTTCTTCTGGAAATTATAGATTATGTCAAACATGATGGCATAGTATCCAAGAGGCTAGTGCTATTATCGAGCCAGGAAAATACGGCTGAATGCGCAGTACCTATTCGCATTGGATCGACTTTGGATTGGAAATCAAAGGTGCAGATTATTGGGAGGTCTTCAAACGTTGGTTGGACGTTAACCAGGCAGCTTGTCTCCCTAACTGATAAATATTTTAAGATACCGTACAAAAATGTGAACAAACATAGGATGTTTTGTACAAAACATTTGGCTAGGTGTCCAGTAAAGGCCGGTGATCTTTTGATACAGAGGGGCTTCTTGTTTGGACTTGCGACGACCAGTGTTCAAATCAAAAGAAATACTAAAGCTTGTTTTGCCAATCTAACAGCGGTAAGGGGGGAGCTGGATGATCTCAATCTGGGGATAAATTTTGAGTCAGTTGCTATAGCGAGAACTAATCTTAGTAAAACATAA
Protein
MEEIIDDNKVIENDNDLEPEYKYNFINRPWDDRSIKSKVCLVALLIAIFTATMACVINNFVMHYRSFNSATNLNSEINCFRIKLNEYPFVARIHSLSSKKLICVGAVVSQTSVLASGVCVQNGPILAYMGSNANSRCKKGFLLEIIDYVKHDGIVSKRLVLLSSQENTAECAVPIRIGSTLDWKSKVQIIGRSSNVGWTLTRQLVSLTDKYFKIPYKNVNKHRMFCTKHLARCPVKAGDLLIQRGFLFGLATTSVQIKRNTKACFANLTAVRGELDDLNLGINFESVAIARTNLSKT

Summary

Pfam
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
SUPFAM
SSF50494   SSF50494       

Ontologies

Topology

Length:
297
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
24.6022499999999
Exp number, first 60 AAs:
20.87738
Total prob of N-in:
0.77779
POSSIBLE N-term signal
sequence
inside
1  -  38
TMhelix
39  -  61
outside
62  -  297
 
 

Population Genetic Test Statistics

Pi
24.98841
Theta
18.674979
Tajima's D
0.966342
CLR
0
CSRT
0.664016799160042
Interpretation
Uncertain
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