Silkworm Genome Informatics Database

Gene

KWMTBOMO09013

Pre Gene Modal

BGIBMGA007760

Annotation

PREDICTED:_uncharacterized_protein_LOC106138399_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr15(+):9693286-9699086 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.409

CDS

ATGAGTGCTTGTTTTCAAAAATGTCGTTTATGCTTAAAACTTGGTGAATTCTGTTCCATATTTGATCAGGACGAATCTGTTAAATTATCTGAGATGGTTATGTCCTTTGCTAATGTGCAAATACACGAAGGTGATGGACTATCAGACCGCGTATGTACTTCATGTATTGAGAATTTAAGCACTGCTTACTTGTTTAAGCAACAATGTGAACGGATAGATTACTTGCTAAGGAAGTCTCCAGACGTCAATATCAAGTCACCTCCAAATGCAAATTATGATGATTTTTTCAACCAAGAGTTCCACATTCATACTGAGCTTAATGATCTAAAAGATGACAATGAAGATAATGGTTTCATTAATACTAGTTCAGACCAACCACTAACTAAGCATCATGAAATCAGCGATGAAACAGATGATAGTGATGTTGATTCTATAAAATGCGTTGGGTGCAGTCAGTCATACAGCACCAAGGGGATGCACACATGTAAAACAACCTGCACAATTGAACAAAACGACTTACAAAGGTCATGCAGCGATGAAACGTTAATAGCTAATGATTGCACACAGAACATGTCTTCAACACCAGTAACACCAACTTCACCTCGATCTTCATTTGTGAATGTTTCTTGTGTACTCTGCACTAAAAAATATGATCAATATGATGATTATGTTATACATATCAACGAGTGCACAATGAATGTGAAACTTCAACATTTTGTATGCCCAATATGCCATGAGATGTATACTGAAAAGCTGCTATATTTAAAACATTTAAGGATAACTCACTTTATCAACAATTCTCCAAAAACCAGTATCACTGATAATGGCGAGGACTGTGTTGATTTCCCTATATACAGTAAAGCCAAGCCCAAGTCAGCCCGACGTCAGATTGGTTGGTCAGTCGAAGATATTTATCAAGAAATTGATTTCAAACCTGCTGAGCAGAAATCGACACCGACCTCAAGTCCATTGAAGAACTTTTTCTCTAAATTGGGGAATGAAACTTTTAGTCGCCAGAGCACCCCAAAAAAGGTTAGTTTTCGGAAACTTGTCGAAAATGGCAAGGCAAAAGCTTCAATTCATTTGCCATTTCAAAAATATATACAAAATTATAAACTAAAAAAGAAAGCAACAGCATATAGTCCTATTAAAGGGAAACTTCAGGTTGCTACTAAAATTCAGGCTTGCCTACCAGAAATTGTTTCAGACAGTGATTACAATTCACCCAGTGGCGCATCAGAAGATTCTTGGAAATTGAAGCAAAATTTAATTTGTGCATGTGATAAGAAAGTCTTCATGTTGTCAGAATCAATTAAGGACCGTGAAAGGATTACCGCCATGGTAAACGAACTAGGTGGCGTAGTTGCGGAAAACACTAAAATGGAAATGTTAGCGACTCACTTTATATGTTTGTTACCGAATGATACATTTACTGGCATGATGGTTTGTGCTCTCGCTACCGGCAAGTGGCTGCTTAGCATCAATTTTATCTACGACAGCTTTAGATGCAAGAAGTTCATGCAGGAATCTCTCTATGAATGGATGAAACACCCGAAAATATTAGAAATCGATAGCACAAGCGTGGAGGTTGCAAGAGCCGCTGTCTACTGGCATTTAGAACTGCAGAATCTTGATGCGAGATTTCCATTCGAAGGAAAACAAGTTGTTCTTATCATGAAGAAGAAGTACAGACAATATTACCAAATGATATTCAAAACGCTGAAAGCAAAACCAATCACTTACGATCCTAGGACCCCAGGCAGCTGCTGCACGGCAGACTACTGTTTCGTCGATATGAACATCATTCAGAGGGTGAAGCTTCGTTTTTTCGCTCGGCACAATGTTCCCGTTTTCCCTTACCAATATGTTCTTGTTTATCTGTTGAAACGAGGTCGCGTTGAAGACGAATATAAATATCTCCTGCAAGACTTCGTGTGCTTCAGTTTGTATAATAGATAA

Protein

MSACFQKCRLCLKLGEFCSIFDQDESVKLSEMVMSFANVQIHEGDGLSDRVCTSCIENLSTAYLFKQQCERIDYLLRKSPDVNIKSPPNANYDDFFNQEFHIHTELNDLKDDNEDNGFINTSSDQPLTKHHEISDETDDSDVDSIKCVGCSQSYSTKGMHTCKTTCTIEQNDLQRSCSDETLIANDCTQNMSSTPVTPTSPRSSFVNVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKLLYLKHLRITHFINNSPKTSITDNGEDCVDFPIYSKAKPKSARRQIGWSVEDIYQEIDFKPAEQKSTPTSSPLKNFFSKLGNETFSRQSTPKKVSFRKLVENGKAKASIHLPFQKYIQNYKLKKKATAYSPIKGKLQVATKIQACLPEIVSDSDYNSPSGASEDSWKLKQNLICACDKKVFMLSESIKDRERITAMVNELGGVVAENTKMEMLATHFICLLPNDTFTGMMVCALATGKWLLSINFIYDSFRCKKFMQESLYEWMKHPKILEIDSTSVEVARAAVYWHLELQNLDARFPFEGKQVVLIMKKKYRQYYQMIFKTLKAKPITYDPRTPGSCCTADYCFVDMNIIQRVKLRFFARHNVPVFPYQYVLVYLLKRGRVEDEYKYLLQDFVCFSLYNR

Uniprot

H9JE13 A0A2A4K6L6 A0A2H1WAR7 A0A212EQU6 A0A194PK19 A0A194R7J2 + More
A0A2A4K887 A0A0L7LKP7 A0A437BRK2

Pubmed

19121390 22118469 26354079 26227816

EMBL

BABH01002508 NWSH01000076 PCG79881.1 ODYU01007404 SOQ50137.1 AGBW02013218 + More
OWR43857.1 KQ459602 KPI93368.1 KQ460615 KPJ13617.1 PCG79880.1 JTDY01000770 KOB75939.1 RSAL01000018 RVE52869.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053268 UP000053240 UP000037510 + More
UP000283053

PRIDE

H9JE13

Pfam

PF07776 zf-AD + More
PF00078 RVT_1

Interpro

IPR036420   BRCT_dom_sf        + More
IPR001357   BRCT_dom
IPR012934   Znf_AD
IPR013087   Znf_C2H2_type
IPR000477   RT_dom

SUPFAM

SSF52113 SSF52113

Gene 3D

3.40.50.10190

CDD

cd00027 BRCT

ProteinModelPortal

H9JE13 A0A2A4K6L6 A0A2H1WAR7 A0A212EQU6 A0A194PK19 A0A194R7J2 + More
A0A2A4K887 A0A0L7LKP7 A0A437BRK2

PDB

3AL3 E-value=7.82987e-05, Score=112

KEGG

101742164 no KO assigned | (RefSeq) uncharacterized LOC101742164

GO

GO:0008270 GO:0003676 GO:0005634 GO:0016021 GO:0016853 GO:0046872 GO:0005794 GO:0008565 GO:0015031 GO:0030123 GO:0016876 GO:0043039

Length:

652

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

13.49855

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00128

outside

1 - 652

Pi

308.521159

Theta

225.37674

Tajima's D

1.51529

CLR

0.003529

CSRT

0.791560421978901

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics