SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09008  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007757
Annotation
aquaporin_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.426
 

Sequence

CDS
ATGGGTGAGCTTGGTACTAAACTGGGATTGGACGAGCTGACCGGAGGAGCCGCTACGATCAGCAGAGCACTACTCGCTGAGTTTATCGGTAACTTGCTCCTAAATCTGTTCGGCTGTGGTGCATGTGTGAAGATTTCTCTGGAGTCCAACAGTGAAACGGACATCTTGCTCATCGCTTTGGCGTTTGGGCTAGCGGTATTTGCTGCTGTCTCGGCAATAGGTCATATTTCTGGCGGACACCTAAACCCGGCGGTGACAGCCGGCATGCTGTGCACGGGCCGCATCAAGCTCATCCGTGCGGTGCTGTACGTCATCGTGCAATGCGCCGGGGCCGCGGCCGGTTCGGGACTGCTCAAGGCGCTGACGCCGGACCGCATGGCCGGCAGTCTCGGCTGCACCGGTCTCGGCGTTGACGTTACAGAGCTCCAGGGTTTCGGTATTGAGTTCTTCCTTGGATTCTTACTTGTCTTCATCGTTTGTGGGGTGTGCGATGCCAATAAGCCGGACAGTAAAGCAACGGCCCCGCTCGCCATCGGCCTCACCGTGACCCTGGGTCACTTGCTCGCCGTCGACTACACCGGCTCTGCCATGAACCCAGCCCGCTCCTTTGGCTCGGCCCTCGTCGCTAGCAACTGGAGTCACCATTGGATATACTGGGCTGGACCTATTGCTGGCGGTATTGCTGGTGCTTTGCTGTACGTCCACGGATTTACCGCGCCACCCCAGGAGCCGCCGACCAGATACAGATCTGTTGCCGGTGACGAAAAGGAGCTGAAGCGACTTGATGGTGGTAAACTGGACGACATGGCCTGA
Protein
MGELGTKLGLDELTGGAATISRALLAEFIGNLLLNLFGCGACVKISLESNSETDILLIALAFGLAVFAAVSAIGHISGGHLNPAVTAGMLCTGRIKLIRAVLYVIVQCAGAAAGSGLLKALTPDRMAGSLGCTGLGVDVTELQGFGIEFFLGFLLVFIVCGVCDANKPDSKATAPLAIGLTVTLGHLLAVDYTGSAMNPARSFGSALVASNWSHHWIYWAGPIAGGIAGALLYVHGFTAPPQEPPTRYRSVAGDEKELKRLDGGKLDDMA

Summary

Similarity
Belongs to the MIP/aquaporin (TC 1.A.8) family.
EMBL
AB458833    BAH29748.1    BABH01002517    NWSH01000076    PCG79886.1    ODYU01000314    + More
SOQ34835.1    KC692748    AHF53539.1    KC692749    AHF53540.1    KQ460615    KPJ13610.1    AGBW02013218    OWR43852.1    KQ459602    KPI93363.1    KC999955    AGT50944.1    KX943613    APY26694.1    GAPW01003394    JAC10204.1    GFDL01002600    JAV32445.1    DQ440307    CH477274    ABF18340.1    EAT45186.1    GGFJ01008481    MBW57622.1    GGFJ01008513    MBW57654.1    GAMD01001395    JAB00196.1    AXCN02000734    ADMH02000357    ETN66846.1    GGFM01007072    MBW27823.1    GGFM01002823    MBW23574.1    GFDL01009114    JAV25931.1    GGFK01003211    MBW36532.1    GGFK01003350    MBW36671.1    GGFK01003220    MBW36541.1    GEDC01019391    JAS17907.1    KY921809    ART29398.1    KX129951    APP14132.1    GFDL01002604    JAV32441.1    AAAB01008984    KR020501    AB523397    AKP92849.1    BAI60044.1    APCN01003350    AXCM01000043    ATLV01018366    KE525231    KFB43011.1    APGK01044402    APGK01044403    APGK01044404    APGK01044405    APGK01044406    KB741026    KB631924    ENN74890.1    ERL87183.1    KF649616    AHB86600.1    GFDL01009148    JAV25897.1    GFDF01009242    JAV04842.1    GEDC01028664    GEDC01008986    JAS08634.1    JAS28312.1    GEDC01025097    JAS12201.1    GFDF01009243    JAV04841.1    GECZ01030974    JAS38795.1    AJWK01031823    AJWK01031824    AJWK01031825    JF342682    AEA04450.2    GECU01014742    JAS92964.1    GEBQ01006390    JAT33587.1    GEBQ01025258    JAT14719.1    GECU01034463    JAS73243.1    DS232465    EDS42175.1    CM000158    EDW90917.1    KQ971317    EEZ98804.1    CH963849    EDW74381.1    AB602341    BAK32936.1    EAA14816.4    CP012524    ALC41292.1    AB602342    BAK32937.1    JXUM01030302    KQ560880    KXJ80498.1    LJIG01016112    KRT81580.1    JXUM01001219    FR744897    CBY77924.1    AE013599    AAF58642.1    CH480816    EDW47418.1    CM000362    CM002911    EDX06632.1    KMY93005.1    CH954179    EDV56459.1    CH902619    EDV35595.1    CH940648    EDW61330.1    GECZ01016440    JAS53329.1    GEZM01044913    JAV78045.1    GEBQ01010394    JAT29583.1    GFDL01010552    JAV24493.1    DS235768    EEB16742.1   
Pfam
PF00230   MIP
Interpro
IPR034294   Aquaporin_transptr        + More
IPR023271   Aquaporin-like       
IPR000425   MIP       
IPR022357   MIP_CS       
SUPFAM
SSF81338   SSF81338       
Gene 3D
PDB
2D57     E-value=1.97763e-30,     Score=328

Ontologies

Topology

Length:
270
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
115.02255
Exp number, first 60 AAs:
14.10113
Total prob of N-in:
0.30517
POSSIBLE N-term signal
sequence
outside
1  -  56
TMhelix
57  -  79
inside
80  -  99
TMhelix
100  -  122
outside
123  -  141
TMhelix
142  -  161
inside
162  -  173
TMhelix
174  -  196
outside
197  -  215
TMhelix
216  -  238
inside
239  -  270
 
 

Population Genetic Test Statistics

Pi
267.812377
Theta
172.553982
Tajima's D
1.729268
CLR
0.418988
CSRT
0.836558172091395
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 LGLDELTGGAATISR 100.00 0.006
28556443 LGLDELTGGAATISR 100.00 0.006
28556443 IPVSVAVSDIIK 100.00 0.006
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