SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09007  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007756
Annotation
PREDICTED:_uncharacterized_protein_LOC101742598_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.912
 

Sequence

CDS
ATGATTTATAGGCCCCCTAAAATCAAGAAGGAAGATAAAGCAGAAACCAAAATTGAACAAGTAAATTTGGAAAAATCTCAAAAAGATAGTGATAGCAGCAAACTTGATAAAGTAACATCAGAAAAAGAGGATGGAAGCAAATCTGACCTAACGGACAGTGAATCAGGCAAGCCGAACTCTGATCAAAACGCACCGGGTGGAGTTTTGGTCTCTCCTACGACAGGACAAACACTAAAGAAGGTACCAATCAAGGCACTTCCGCCAGGAGTAAAACCATTACCTCTACTGGCAAACACGAGATTGGGTAGCGGCGAAGTCTGTGAAATGCAAATAGGAAAGAAGTTAGTCAAAGTACAAAAGATAGTTATGACCAAAGCAGAAGTGGAAGCCATGGCCAAGAAGGGGCTCGTCGAAATGAAGGACGGCACGATGGTTTTGAAGCAAGGAATAAAAATACCAACTGCAGATAACAATACGTTAAAATCTACATCAATCGGAGAAGGTTACGAGGCGAGCAAAGAATCTCCTAAAAAAGAAAGGGGTGCACCCACGAGATGTGACATAGGCGACGATTCCTTGAAATAA
Protein
MIYRPPKIKKEDKAETKIEQVNLEKSQKDSDSSKLDKVTSEKEDGSKSDLTDSESGKPNSDQNAPGGVLVSPTTGQTLKKVPIKALPPGVKPLPLLANTRLGSGEVCEMQIGKKLVKVQKIVMTKAEVEAMAKKGLVEMKDGTMVLKQGIKIPTADNNTLKSTSIGEGYEASKESPKKERGAPTRCDIGDDSLK

Summary

Pfam
PF07776   zf-AD        + More
PF00096   zf-C2H2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       
SUPFAM
SSF57667   SSF57667       

Ontologies

Topology

Length:
194
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.22983
outside
1  -  194
 
 

Population Genetic Test Statistics

Pi
236.655982
Theta
167.121764
Tajima's D
0.130148
CLR
0.093497
CSRT
0.412129393530323
Interpretation
Uncertain
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