Gene

KWMTBOMO09003  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007778

Annotation

PREDICTED:_golgi_SNAP_receptor_complex_member_2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr15(-):9489192-9496311      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.476

CDS

ATGGAAACATTATACCATCAGACAAATCAATTGCTACAAGAAACTACAGATCTTTTTAATAAATTAGAGAGAGATCCAGCCAATCACCAACAAATAGAAAATGCAATTCAATCAAAGATAAACACAGTCAATGCGAACTGTGAAAAACTAGATATTTATGTTTTTAAAACACCAATAAATCAAAGGTCTATGGCTAAAATGAGAGTGGACCAGCTGAAGTATGATAACAAACACATACAGGCTTCTCTTATAAATGCCCAAAACAAAAGACAAAAACGGGAACAAGAATTAGCTGAAAGGGAACAACTTTTGAACCGGCGTTTTGGACATGATCACACAGAAATAAATGTAGACTACTTAGCTCAAGAGCAAGCGTCTTTGCAGAATTCACATAGACATGTCGATGATATGTTGCATACAGGTACGAATATTTTGAACACGCTTAAATATAACAGAGACACGATCAAGAGTGCCCATAGGAGGATCATCGATTTGGCCAATACCCTGGGCTTGTCTAATGCGACTATCTCACTGATAGAACGCAGAGTTTCCCAGGACAAATATATTTTGTTTGGCGGAATGATATTCACTTTGGGTGTTATCGTTCTTGTTGTTATATACTTGACGTAG

Protein

METLYHQTNQLLQETTDLFNKLERDPANHQQIENAIQSKINTVNANCEKLDIYVFKTPINQRSMAKMRVDQLKYDNKHIQASLINAQNKRQKREQELAEREQLLNRRFGHDHTEINVDYLAQEQASLQNSHRHVDDMLHTGTNILNTLKYNRDTIKSAHRRIIDLANTLGLSNATISLIERRVSQDKYILFGGMIFTLGVIVLVVIYLT

Description

Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.

Similarity

Belongs to the GOSR2 family.

Uniprot

H9JE31   Q1HQ00   A0A2A4J5B7   A0A1E1WMJ1   A0A194PK09   A0A212F6Q2   + More
I4DPT7   A0A194R8N1   S4PMX3   A0A3S2LTP6   D6WM18   A0A0K8TS74   A0A026WZ20   A0A1W4X3S9   A0A088AM34   A0A154P2L7   A0A1Y1LR73   A0A2A3EEV0   A0A0N0BIR7   A0A1L8DUP4   A0A1B6DPV0   Q17AQ3   A0A1S4F9W4   A0A1Q3FC92   A0A023ELX1   A0A2J7QDZ7   A0A182J0I4   A0A084VJM4   B0WGZ5   A0A182M6V1   E9J3D6   A0A182XXE0   A0A1B0D9D3   A0A182I8T3   A0A182P786   A0A182UVX7   A0A182R5X2   A0A182WV58   A0A1S4GJ96   A0A182LAP9   A0A182UA30   A0A1Y9H2L8   A0A1B6IEY5   A0A2M4AVR4   A0A1I8JSN3   A0A195B6K8   A0A158NGY9   A0A195FNG0   A0A1B6EQ79   A0A151K2Z8   A0A151XD97   A0A2M4C032   A0A1B6IA95   A0A0L7RIF6   F4X136   A0A1B6LIN1   A0A087YXN2   A0A2M4CQE7   A0A182K4T4   A0A182Q7A6   A0A182VXV1   A0A2P8Y8U6   A0A2M4CYI4   J3JZ30   A0A151I8K0   A0A1L8DW11   A0A0P4VL02   A0A0A9WY87   E2BW95   A0A0A9YXC4   U5EZ35   E2ALZ0   A0A0T6AYV2   T1HUY8   A0A0V0G7A0   A0A0K8U5V0   A0A1I8PZ29   A0A1B0GGE7   A0A1A9ZMI1   A0A224YU72   A0A131YCB8   A0A034WGR1   A0A210QMS3   A0A1I8MRY9   W8BU74   A0A023FFN8   A0A1A9WR99   A0A1S3J6A9   A0A087TI67   K7IWE6   A0A232FD88   B4MM12   B4KXE5   A0A0K8RMG3   A0A0L8GRT4   B4IX16   R7TL43   A0A336LPP1   V4B413  

Pubmed

19121390    26354079    22118469    22651552    23622113    18362917    + More
19820115    26369729    24508170    30249741    28004739    17510324    24945155    24438588    21282665    25244985    12364791    20966253    21347285    21719571    20920257    29403074    22516182    27129103    25401762    20798317    26823975    28797301    26830274    25348373    28812685    25315136    24495485    20075255    28648823    17994087    18057021    23254933   

EMBL

BABH01002524    DQ443252    ABF51341.1    NWSH01002972    PCG67171.1    GDQN01002815    + More
JAT88239.1    KQ459602    KPI93358.1    AGBW02009983    OWR49415.1    AK403775    BAM19927.1    KQ460615    KPJ13605.1    GAIX01003315    JAA89245.1    RSAL01000237    RVE43706.1    KQ971343    EFA03370.1    GDAI01000399    JAI17204.1    KK107063    QOIP01000005    EZA60996.1    RLU22766.1    KQ434806    KZC06121.1    GEZM01054608    JAV73527.1    KZ288282    PBC29541.1    KQ435727    KOX77841.1    GFDF01003927    JAV10157.1    GEDC01009655    JAS27643.1    CH477331    EAT43333.1    GFDL01009868    JAV25177.1    GAPW01004324    GEHC01000370    JAC09274.1    JAV47275.1    NEVH01015354    PNF26793.1    ATLV01013778    KE524891    KFB38168.1    DS231931    EDS27320.1    AXCM01002150    GL768061    EFZ12665.1    AJVK01028174    APCN01003116    AAAB01008844    GECU01022222    JAS85484.1    GGFK01011562    MBW44883.1    KQ976574    KYM80141.1    ADTU01015336    KQ981387    KYN42013.1    GECZ01029681    JAS40088.1    LKEY01014849    KYN50499.1    KQ982294    KYQ58300.1    GGFJ01009350    MBW58491.1    GECU01033348    GECU01023893    JAS74358.1    JAS83813.1    KQ414584    KOC70583.1    GL888525    EGI59847.1    GEBQ01016432    JAT23545.1    GGFL01003321    MBW67499.1    AXCN02001147    PYGN01000800    PSN40671.1    GGFL01006218    MBW70396.1    BT128511    AEE63468.1    KQ978346    KYM94756.1    GFDF01003462    JAV10622.1    GDKW01000804    JAI55791.1    GBHO01031218    GBHO01027959    GBHO01006738    GBRD01005547    JAG12386.1    JAG15645.1    JAG36866.1    JAG60274.1    GL451103    EFN79999.1    GBHO01006735    GDHC01021172    JAG36869.1    JAP97456.1    GANO01001504    JAB58367.1    GL440703    EFN65510.1    LJIG01022524    KRT80123.1    ACPB03002116    GECL01002137    JAP03987.1    GDHF01030272    JAI22042.1    CCAG010020395    GFPF01008143    MAA19289.1    GEDV01011583    JAP76974.1    GAKP01005438    GAKP01005435    JAC53517.1    NEDP02002776    OWF50034.1    GAMC01001641    GAMC01001640    JAC04916.1    GBBK01003691    JAC20791.1    KK115333    KFM64806.1    NNAY01000410    OXU28602.1    CH963847    EDW73021.1    CH933809    EDW18631.1    KRG06293.1    GADI01002109    JAA71699.1    KQ420662    KOF79678.1    CH916366    EDV96322.1    AMQN01002527    KB309449    ELT94374.1    UFQT01000097    SSX19755.1    KB203771    ESO83159.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000283053    + More
UP000007266    UP000053097    UP000279307    UP000192223    UP000005203    UP000076502    UP000242457    UP000053105    UP000008820    UP000235965    UP000075880    UP000030765    UP000002320    UP000075883    UP000076408    UP000092462    UP000075840    UP000075885    UP000075903    UP000075900    UP000076407    UP000075882    UP000075902    UP000075884    UP000069272    UP000078540    UP000005205    UP000078541    UP000078492    UP000075809    UP000053825    UP000007755    UP000075881    UP000075886    UP000075920    UP000245037    UP000078542    UP000008237    UP000000311    UP000015103    UP000095300    UP000092444    UP000092445    UP000242188    UP000095301    UP000091820    UP000085678    UP000054359    UP000002358    UP000215335    UP000007798    UP000009192    UP000053454    UP000001070    UP000014760    UP000030746   

PRIDE

H9JE31    Q1HQ00   

Pfam

PF06565   DUF1126        + More
PF02297   COX6B
PF05529   Bap31
PF18035   Bap31_Bap29_C

Interpro

IPR027027   GOSR2/Membrin/Bos1        + More
IPR010554   DUF1126       
IPR006602   Uncharacterised_DM10       
IPR003213   Cyt_c_oxidase_su6B       
IPR036549   Cyt_c_oxidase_su6B_sf       
IPR040463   BAP29/BAP31_N       
IPR041672   Bap31/Bap29_C       

SUPFAM

SSF47694   SSF47694       

Gene 3D

1.10.10.140    

ProteinModelPortal

H9JE31   Q1HQ00   A0A2A4J5B7   A0A1E1WMJ1   A0A194PK09   A0A212F6Q2   + More
I4DPT7   A0A194R8N1   S4PMX3   A0A3S2LTP6   D6WM18   A0A0K8TS74   A0A026WZ20   A0A1W4X3S9   A0A088AM34   A0A154P2L7   A0A1Y1LR73   A0A2A3EEV0   A0A0N0BIR7   A0A1L8DUP4   A0A1B6DPV0   Q17AQ3   A0A1S4F9W4   A0A1Q3FC92   A0A023ELX1   A0A2J7QDZ7   A0A182J0I4   A0A084VJM4   B0WGZ5   A0A182M6V1   E9J3D6   A0A182XXE0   A0A1B0D9D3   A0A182I8T3   A0A182P786   A0A182UVX7   A0A182R5X2   A0A182WV58   A0A1S4GJ96   A0A182LAP9   A0A182UA30   A0A1Y9H2L8   A0A1B6IEY5   A0A2M4AVR4   A0A1I8JSN3   A0A195B6K8   A0A158NGY9   A0A195FNG0   A0A1B6EQ79   A0A151K2Z8   A0A151XD97   A0A2M4C032   A0A1B6IA95   A0A0L7RIF6   F4X136   A0A1B6LIN1   A0A087YXN2   A0A2M4CQE7   A0A182K4T4   A0A182Q7A6   A0A182VXV1   A0A2P8Y8U6   A0A2M4CYI4   J3JZ30   A0A151I8K0   A0A1L8DW11   A0A0P4VL02   A0A0A9WY87   E2BW95   A0A0A9YXC4   U5EZ35   E2ALZ0   A0A0T6AYV2   T1HUY8   A0A0V0G7A0   A0A0K8U5V0   A0A1I8PZ29   A0A1B0GGE7   A0A1A9ZMI1   A0A224YU72   A0A131YCB8   A0A034WGR1   A0A210QMS3   A0A1I8MRY9   W8BU74   A0A023FFN8   A0A1A9WR99   A0A1S3J6A9   A0A087TI67   K7IWE6   A0A232FD88   B4MM12   B4KXE5   A0A0K8RMG3   A0A0L8GRT4   B4IX16   R7TL43   A0A336LPP1   V4B413  

KEGG

732950    K08496 golgi SNAP receptor complex member 2 | (RefSeq) golgi SNAP receptor complex member 2

PATHWAY

04130    SNARE interactions in vesicular transport - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005484   GO:0005794   GO:0016192   GO:0016020   GO:0015031   GO:0006891   GO:0006623   GO:0006888   GO:0031902   GO:0031201   GO:0006896   GO:0042147   GO:0005829   GO:0048280   GO:0012507   GO:0005789   GO:0000149   GO:0005739   GO:0006886   GO:0005783   GO:0006810   GO:0046872   GO:0008565   GO:0030123   GO:0016876   GO:0043039  

Length:

209

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.58294

Exp number, first 60 AAs:

0

Total prob of N-in:

0.90475

inside

1  -  188

TMhelix

189  -  208

outside

209  -  209

 

 

Pi

276.785427

Theta

178.109842

Tajima's D

1.669063

CLR

0.003529

CSRT

0.826108694565272

Interpretation

Uncertain