Gene

KWMTBOMO09001

Annotation

EF-hand_domain-containing_protein_1-like_Protein_[Tribolium_castaneum]

Location

Bomo_Chr15(+):9468612-9473087      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.927 Nuclear   Reliability : 1.476

CDS

ATGGACACGTCGTGGTTCAACGTTGTGTGGGACGATCGTGATTCTGAAAACGGGGAACTGCGTGAATACAAACTTTTGTATTTTCTCCAAGACGACACCATTGCTGTAAAGGAGCTCCATGACGAGAAGGGCGGGAAAGATCCATTTCCGTTATTGCTTAAGAAAACAAAACTGCCTAAAAAGTGGAAAGAAAAACCCGTATCGTTTCCGTCAACTGTTTTGGAAACGAGCGAAGAAGAGGTGACTGAGTATTACGCACCGAGGGATCTCATCGTCGGACAGACCGTGTTCGTACTCGGACGCAAATTCTTACTTTGCGACTGCGATAACTTCACTAGAAATTATTACAAGTAA

Protein

MDTSWFNVVWDDRDSENGELREYKLLYFLQDDTIAVKELHDEKGGKDPFPLLLKKTKLPKKWKEKPVSFPSTVLETSEEEVTEYYAPRDLIVGQTVFVLGRKFLLCDCDNFTRNYYK

Uniprot

A0A437B0L7   A0A194PKU7   A0A2A4JAD4   A0A2H1VG06   A0A212F6Q8   A0A0L7LUK7   + More
A0A1W4WHL6   D6WNG5   A0A1Y1MXP4   A0A1Y1MR20   A0A1Y1MR06   A0A182NFX1   A0A182QXH2   F5HJB5   A0A182SJG7   A0A182WV54   A0A182XXD5   Q7QFW6   A0A182P782   A0A182TQL7   A0A182VIB5   A0A182LAP8   A0A182R5X6   A0A182I8S9   A0A182LTD2   A0A182KBL2   A0A182J8S8   B0X7U2   A0A182VXU8   Q17AQ5   A0A1S4F9Z2   A0A1Q3FT48   A0A182F9G4   A0A1Q3FSY2   W5JUQ5   A0A182H7M6   A0A182GJ77   A0A2P8Z3A3   A0A067RM37   A0A1B6DLI7   N6UDK8   A0A1J1IF72   F2UH95   A0A2B4RZ40   F6XBA5   Q32TF7   H2Y7K8   A0A3M6U3I4   A0A3Q1GH64   A0A0R3WF43   A0A369RWC0   B3SDH5   A0A0P7VP55   A0A1W4YQF7   K1Q894   A0A183T0R3   A0A3P7CT37   A0A1S3FDV2   C3YQF2   A7SR82   A0A0X3P4B5   A0A2K5E9G9   V3Z5I6   A0A2C9JKF3   A0A2C9JKD7   A0A1S3K0U8   A0A1B0D9D4   Q4R667   A0A0L8HBP0   A0A158QFP9   A0A1B6KML1   A0A2J8P110   A0A2K5Y6Q7   A0A2K6M9P6   A0A1B0GU13   A0A2K6DLF3   A0A2K5TJ56   A0A2I3LP28   A0A2K5MYD5   A0A2K5MYB9   A0A2K6NMY1   A0A2K6DLI0   A0A2K5TJ51   A0A2K6DLB5   A0A2K6M9N9   A0A2K6NMV9   A0A2K5Y6Q0   A0A2K5Y6M6   A0A2I2YWP3   A0A2K5TJ40   A0A2K6DLA8   A0A2I3N9N7   A0A2K5MYB6   A0A2K6NMV4   B7Z2S4   A0A2J8P102   A0A2K6M9N2   A0A0R3U7H5   A0A2K5TJ50   A0A1D5Q6N6  

Pubmed

26354079    22118469    26227816    18362917    19820115    28004739    + More
12364791    14747013    17210077    25244985    20966253    17510324    20920257    23761445    26483478    29403074    24845553    23537049    12481130    15114417    12203911    16141696    30382153    30042472    18719581    22992520    18563158    17615350    23254933    15562597    15944441    14574404    25362486    22398555    17431167   

EMBL

RSAL01000237    RVE43705.1    KQ459602    KPI93354.1    NWSH01002150    PCG69045.1    + More
ODYU01002339    SOQ39711.1    AGBW02009983    OWR49413.1    JTDY01000055    KOB79135.1    KQ971343    EFA04366.1    GEZM01023949    GEZM01023947    JAV88117.1    GEZM01023948    JAV88119.1    GEZM01023945    JAV88123.1    AXCN02001147    AAAB01008844    EGK96376.1    EAA06054.5    APCN01003114    AXCM01011965    DS232463    EDS42161.1    CH477331    EAT43330.1    GFDL01004452    JAV30593.1    GFDL01004483    JAV30562.1    ADMH02000438    ETN66484.1    JXUM01028326    JXUM01028327    JXUM01028328    KQ560818    KXJ80767.1    JXUM01067487    JXUM01067488    KQ562452    KXJ75877.1    PYGN01000217    PSN50975.1    KK852591    KDR20690.1    GEDC01010763    JAS26535.1    APGK01032733    KB740848    KB631797    ENN78711.1    ERL86210.1    CVRI01000048    CRK98917.1    GL832974    EGD76494.1    LSMT01000225    PFX22901.1    EAAA01001578    AY823394    AAX08049.1    RCHS01002311    RMX48104.1    UYRS01019192    VDK43528.1    NOWV01000152    RDD38978.1    DS985279    EDV19218.1    JARO02000644    KPP77856.1    JH818178    EKC30173.1    UYSU01035625    VDL96446.1    GG666542    EEN57482.1    DS469758    EDO33757.1    GEEE01021229    JAP41996.1    KB203188    ESO86018.1    AJVK01028174    AB169323    BAE01408.1    KQ418715    KOF86190.1    UYSG01011247    VDL61575.1    GEBQ01027282    JAT12695.1    NBAG03000221    PNI77669.1    AL049611    AL136125    AL138722    AQIA01051620    AQIA01051621    AQIA01051622    AQIA01051623    AHZZ02024781    AHZZ02024782    CABD030045064    CABD030045065    CABD030045066    AK295064    BAH11960.1    PNI77692.1    UXSR01000504    VDD76774.1    JSUE03031048    JSUE03031049    JSUE03031050    JSUE03031051   

Proteomes

UP000283053    UP000053268    UP000218220    UP000007151    UP000037510    UP000192223    + More
UP000007266    UP000075884    UP000075886    UP000007062    UP000075901    UP000076407    UP000076408    UP000075885    UP000075902    UP000075903    UP000075882    UP000075900    UP000075840    UP000075883    UP000075881    UP000075880    UP000002320    UP000075920    UP000008820    UP000069272    UP000000673    UP000069940    UP000249989    UP000245037    UP000027135    UP000019118    UP000030742    UP000183832    UP000007799    UP000225706    UP000008144    UP000007875    UP000275408    UP000257200    UP000046400    UP000282613    UP000253843    UP000009022    UP000034805    UP000192224    UP000005408    UP000050788    UP000275846    UP000081671    UP000001554    UP000001593    UP000233020    UP000030746    UP000076420    UP000085678    UP000092462    UP000053454    UP000046397    UP000274504    UP000233140    UP000233180    UP000005640    UP000233120    UP000233100    UP000028761    UP000233060    UP000233200    UP000001519    UP000046399    UP000267029    UP000006718   

PRIDE

B7Z2S4   

Pfam

PF06565   DUF1126        + More
PF00089   Trypsin
PF00069   Pkinase
PF13499   EF-hand_7

Interpro

IPR040193   EFHC1/EFHC2/EFHB        + More
IPR010554   DUF1126       
IPR006602   Uncharacterised_DM10       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       
IPR033116   TRYPSIN_SER       
IPR011992   EF-hand-dom_pair       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR002048   EF_hand_dom       

SUPFAM

SSF50978   SSF50978        + More
SSF50494   SSF50494       
SSF47473   SSF47473       
SSF56112   SSF56112       

Gene 3D

2.130.10.10    

CDD

cd00190  Tryp_SPc
cd00051  EFh

ProteinModelPortal

A0A437B0L7   A0A194PKU7   A0A2A4JAD4   A0A2H1VG06   A0A212F6Q8   A0A0L7LUK7   + More
A0A1W4WHL6   D6WNG5   A0A1Y1MXP4   A0A1Y1MR20   A0A1Y1MR06   A0A182NFX1   A0A182QXH2   F5HJB5   A0A182SJG7   A0A182WV54   A0A182XXD5   Q7QFW6   A0A182P782   A0A182TQL7   A0A182VIB5   A0A182LAP8   A0A182R5X6   A0A182I8S9   A0A182LTD2   A0A182KBL2   A0A182J8S8   B0X7U2   A0A182VXU8   Q17AQ5   A0A1S4F9Z2   A0A1Q3FT48   A0A182F9G4   A0A1Q3FSY2   W5JUQ5   A0A182H7M6   A0A182GJ77   A0A2P8Z3A3   A0A067RM37   A0A1B6DLI7   N6UDK8   A0A1J1IF72   F2UH95   A0A2B4RZ40   F6XBA5   Q32TF7   H2Y7K8   A0A3M6U3I4   A0A3Q1GH64   A0A0R3WF43   A0A369RWC0   B3SDH5   A0A0P7VP55   A0A1W4YQF7   K1Q894   A0A183T0R3   A0A3P7CT37   A0A1S3FDV2   C3YQF2   A7SR82   A0A0X3P4B5   A0A2K5E9G9   V3Z5I6   A0A2C9JKF3   A0A2C9JKD7   A0A1S3K0U8   A0A1B0D9D4   Q4R667   A0A0L8HBP0   A0A158QFP9   A0A1B6KML1   A0A2J8P110   A0A2K5Y6Q7   A0A2K6M9P6   A0A1B0GU13   A0A2K6DLF3   A0A2K5TJ56   A0A2I3LP28   A0A2K5MYD5   A0A2K5MYB9   A0A2K6NMY1   A0A2K6DLI0   A0A2K5TJ51   A0A2K6DLB5   A0A2K6M9N9   A0A2K6NMV9   A0A2K5Y6Q0   A0A2K5Y6M6   A0A2I2YWP3   A0A2K5TJ40   A0A2K6DLA8   A0A2I3N9N7   A0A2K5MYB6   A0A2K6NMV4   B7Z2S4   A0A2J8P102   A0A2K6M9N2   A0A0R3U7H5   A0A2K5TJ50   A0A1D5Q6N6  

KEGG

101743940    K23029 EF-hand domain-containing protein 1 | (RefSeq) EF-hand domain-containing protein 1-like

GO

GO:0072686   GO:0005930   GO:0000281   GO:0060285   GO:0043014   GO:0007052   GO:0004252   GO:0005509   GO:0051302   GO:0021795   GO:0000922   GO:0005813   GO:0016021  

PANTHER

PTHR12086  

Length:

117

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04346

Exp number, first 60 AAs:

0

Total prob of N-in:

0.33770

outside

1  -  117

 

 

Pi

225.904958

Theta

180.306915

Tajima's D

0.728089

CLR

0.014332

CSRT

0.584020798960052

Interpretation

Uncertain