Gene

KWMTBOMO08997

Pre Gene Modal

BGIBMGA007751

Annotation

PREDICTED:_CD82_antigen-like_[Bombyx_mori]

Location

Bomo_Chr15(+):9431472-9433030      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

PlasmaMembrane   Reliability : 3.243

CDS

ATGCGCTATTACCGCATCTGGATCTACGCCTGCAACGGCGCGCTGCTGCTCGGGGCGTTAGCTTTCTGTGCGGCGGCGGGTCGCGCGCTCTCTGATTACCGTCGGGCACTAGTACCTGGACTCGGTATCGCTCAACCCGGCTTTCTCTACGGGTACGCAGCCCTTCCAGTTCAAGCGGGACTCTTGCAGCTTCTGGGTTGCCTTGCGGCTTTACGCCTTTCGGAACGTATGCTCAACGCTTATTGGCTAGCTCTACTGGCCTTGCTGGTAGGTGACGCAGCCATCGGTGTATATTGGGCTTTTCGTTTCGAACGTGTTTGTCGTGAGCTTCGACCGCAACTGCGACTTCGCCTCGCGAGAGATTACGATACAGACGTGGACTTTGCAGAAGCCTGGGATCGGTTGCAAAGAGAGCAGCGTTGTTGTGGTGTTACGGGTCCTTCTGATTTTGCGACCTTCAACAAGACCACGCTTCCGGCAAGTTGCTGCCGTATTCCTGCACATACCCCGGCCGTGACACCGACATTACTAGCTGTTACTTCCGCAACTTCGCCAGGGCCGTTCACTCCCGTTCATTGCGCTCCGCACACGGCAGCTTGTGCCGAGAGGCTGTTGGTTTGGCTCCGCAGAACGGCGGATGCATTGTTCGTTTTAGGATATTGTGTAATTGCGTTCTTGAAACTGTGTTTCCTAGGCATTCTTCGATACGAAATAAAAGAAATGATCCAAAAAATTAGGATATTGAGAAGCGAACTTGGGGCGGGCGAACTTCTCGACGGTAGTCCGATGCACGGTGGACCTTTATCTCAGACAATCATTGTGAACGCAGTGAATGTGAACGGTGGCGTCAGAGCACATGGGGGTAGTCCGGAGCGTGCGGGAGAACGTGACGCTCTTTTGGGAAGAGCTTCAGAAGCGTGCTCTCGGCGCAGTACGCACGATGAGCCTTTAGGACCCAAAACAATAAACGGTAATAATAATTGTGAGATGCGTGAATTGGCCCGTGGAGAATATCGACCTCTCGCTGCGGACAGTGCGGCGACTCGAATCTGA

Protein

MRYYRIWIYACNGALLLGALAFCAAAGRALSDYRRALVPGLGIAQPGFLYGYAALPVQAGLLQLLGCLAALRLSERMLNAYWLALLALLVGDAAIGVYWAFRFERVCRELRPQLRLRLARDYDTDVDFAEAWDRLQREQRCCGVTGPSDFATFNKTTLPASCCRIPAHTPAVTPTLLAVTSATSPGPFTPVHCAPHTAACAERLLVWLRRTADALFVLGYCVIAFLKLCFLGILRYEIKEMIQKIRILRSELGAGELLDGSPMHGGPLSQTIIVNAVNVNGGVRAHGGSPERAGERDALLGRASEACSRRSTHDEPLGPKTINGNNNCEMRELARGEYRPLAADSAATRI

Similarity

Belongs to the tetraspanin (TM4SF) family.

Uniprot

H9JE04   A0A2A4JVA1   A0A2H1WYM4   A0A194PJ50   A0A212F6P4   A0A194R7H2   + More
A0A0L7LUH7   D6WM30   A0A1Y1KML0   A0A0T6BGD0   N6TWX0   A0A067RAJ8   A0A1J1IKE0   A0A1W4W963   A0A2S2PDG3   A0A1B0GK85   A0A2S2Q081   F4WZW3   A0A195B7T5   A0A158NGN1   A0A151XAM1   A0A195DYC7   J9M3Q2   A0A195FGA8   A0A0C9R4I0   A0A151ICI8   A0A182F9G2   A0A026WYR8   E2ACC3   A0A0L7RIG3   A0A088ARH2   A0A3L8DQX2   T1HTB8   A0A2A3ECY3   A0A0J7L719   A0A2H8TRX6   A0A2H8TX22   E9ILA3   A0A154P675   A0A0N0BIU8   A0A443SCW8   A0A087TV87   A0A2J7Q6I8   K7JUN0   A0A3S4RD86   E2BAR5   A0A1W7R9G0   T1J6S8   A0A2P6L4Y7   L7MH98   A0A146LLG6   A0A0P4WFN9   A0A443RHJ7   B7QNM8   A0A132ACP6   A0A2P2I578   A0A0K2TQ42  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
28004739    23537049    24845553    21719571    21347285    24508170    20798317    30249741    21282665    20075255    25576852    26823975    26555130   

EMBL

BABH01002526    NWSH01000600    PCG75413.1    ODYU01012065    SOQ58169.1    KQ459602    + More
KPI93352.1    AGBW02009983    OWR49411.1    KQ460615    KPJ13597.1    JTDY01000055    KOB79133.1    KQ971343    EFA04214.2    GEZM01081313    JAV61711.1    LJIG01000535    KRT86405.1    APGK01051841    APGK01051842    APGK01051843    APGK01051844    KB741207    KB632327    ENN72891.1    ERL92507.1    KK898964    KK852591    KDQ65252.1    KDR20693.1    CVRI01000048    CRK98921.1    GGMR01014813    MBY27432.1    AJWK01028491    GGMS01001837    MBY71040.1    GL888480    EGI60253.1    KQ976574    KYM80307.1    ADTU01015151    KQ982339    KYQ57350.1    KQ980107    KYN17619.1    ABLF02024487    KQ981625    KYN39054.1    GBYB01007707    GBYB01014404    JAG77474.1    JAG84171.1    KQ978053    KYM97771.1    KK107063    EZA61190.1    GL438491    EFN68913.1    KQ414584    KOC70619.1    QOIP01000005    RLU22845.1    ACPB03016378    KZ288282    PBC29570.1    LBMM01000397    KMQ98463.1    GFXV01005161    MBW16966.1    GFXV01006267    MBW18072.1    GL764074    EFZ18623.1    KQ434826    KZC07429.1    KQ435726    KOX78234.1    NCKV01003743    RWS25401.1    KK116898    KFM69026.1    NEVH01017472    PNF24192.1    AAZX01006348    NCKU01000660    NCKU01000635    RWS14635.1    RWS14729.1    GL446831    EFN87200.1    GFAH01000610    JAV47779.1    JH431887    MWRG01001821    PRD33619.1    GACK01001654    JAA63380.1    GDHC01009798    JAQ08831.1    GDRN01092724    JAI60054.1    NCKU01000636    RWS14728.1    ABJB010284398    ABJB010315849    ABJB010714694    DS979495    EEC20450.1    JXLN01012673    KPM08766.1    IACF01003548    LAB69161.1    HACA01010783    CDW28144.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000037510    + More
UP000007266    UP000019118    UP000030742    UP000027135    UP000183832    UP000192223    UP000092461    UP000007755    UP000078540    UP000005205    UP000075809    UP000078492    UP000007819    UP000078541    UP000078542    UP000069272    UP000053097    UP000000311    UP000053825    UP000005203    UP000279307    UP000015103    UP000242457    UP000036403    UP000076502    UP000053105    UP000288716    UP000054359    UP000235965    UP000002358    UP000285301    UP000008237    UP000001555   

PRIDE

H9JE04   

Pfam

PF00335   Tetraspanin

Interpro

IPR018499   Tetraspanin/Peripherin        + More
IPR008952   Tetraspanin_EC2_sf       
IPR000301   Tetraspanin       

SUPFAM

SSF48652   SSF48652       

Gene 3D

1.10.1450.10    

ProteinModelPortal

H9JE04   A0A2A4JVA1   A0A2H1WYM4   A0A194PJ50   A0A212F6P4   A0A194R7H2   + More
A0A0L7LUH7   D6WM30   A0A1Y1KML0   A0A0T6BGD0   N6TWX0   A0A067RAJ8   A0A1J1IKE0   A0A1W4W963   A0A2S2PDG3   A0A1B0GK85   A0A2S2Q081   F4WZW3   A0A195B7T5   A0A158NGN1   A0A151XAM1   A0A195DYC7   J9M3Q2   A0A195FGA8   A0A0C9R4I0   A0A151ICI8   A0A182F9G2   A0A026WYR8   E2ACC3   A0A0L7RIG3   A0A088ARH2   A0A3L8DQX2   T1HTB8   A0A2A3ECY3   A0A0J7L719   A0A2H8TRX6   A0A2H8TX22   E9ILA3   A0A154P675   A0A0N0BIU8   A0A443SCW8   A0A087TV87   A0A2J7Q6I8   K7JUN0   A0A3S4RD86   E2BAR5   A0A1W7R9G0   T1J6S8   A0A2P6L4Y7   L7MH98   A0A146LLG6   A0A0P4WFN9   A0A443RHJ7   B7QNM8   A0A132ACP6   A0A2P2I578   A0A0K2TQ42  

KEGG

105841999    no KO assigned | (RefSeq) CD82 antigen-like

GO

GO:0016021   GO:0005887   GO:0008152   GO:0005524   GO:0046872   GO:0005794   GO:0008565   GO:0015031   GO:0030123   GO:0016876   GO:0043039  

Subcellular location

Membrane  

Length:

350

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

90.27616

Exp number, first 60 AAs:

35.02937

Total prob of N-in:

0.96701

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  48

TMhelix

49  -  71

inside

72  -  77

TMhelix

78  -  100

outside

101  -  213

TMhelix

214  -  236

inside

237  -  350

 

 

Pi

325.521414

Theta

237.351982

Tajima's D

1.471592

CLR

0.091348

CSRT

0.780410979451027

Interpretation

Uncertain