SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08996
Annotation
reverse_transcriptase_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.788
 

Sequence

CDS
ATGTCCGGTGCAATGTTCGGATTATTATCCAGTTTTGACCACAATCTGCAGTCATGGGAAACTTACAAATGCAGAATTTCTCAGTGGTTCGTAGCTAACGACATTAGCAGAACAAGTGATCCTGCAGGGATAAAAAGACGAGCGATATTGCTGAGCGCACTCACGGACGCCACGTACAAATTAGCGGCGGACCTCGCGGTGCCGAAGACGTTGACCGATGTTCCATATGAAGACATACTTCGGCTATTGGACGACCATTTTACACCTAAGCGTTGTGGTTTCGGCGATCGTTATAAATTTTACGTGGCGGTACAACAAGAAGACGAGACCTACCCTCAATGGGCGGCCAGGTTGCGCGGTCTGATCGGGCATTGTGGGTTTGCCAACGTGGAGGAAGCTCTCAGAGACCGATTCGTTATGGGGATGTTACCCGGACCTGAACGAGAAAAGTTATTTGCACAGGATCTAACAGCCCTATCGCTGGCTAGGGCGGTTGAAATGGCAGAAAGTGTGCGCAGCGCGCGAGTTGGAGCAACCACTGCAGCAGTACAGGTAGCAAAACACGGTCAGCTGTTCAAGATGACGCAATCGACGGCGGCAGGCCGGTCGGGGGCGCTTCGGCTGAAGGATGGCGGCAATAAAGTGCAGTGTCAAGTGTGCGGTTATCATAATCATGATACGTCTCAGTGTCGGAACTCCGTACACACTCTGACTGGGGTTTCGCCCGCAGAGCTTGTTTATGGTAGAAAACTCAGAACGCGTCTTGATCAAATTATACCTGAGTCGTCATCGCCCTCATCCACAGTCCTTGCTGGTGTTGTTAAATTTAAACAGTGTTCGCAAAATAAGACCAAAGTAAATAAAAAACAAAGTTTTACCAAGGGAGATTTAATTCTCTATAAAAAGCATACGGTCAACGGAAAGTTTATTTGGTGCAAAGGCTTCATTGAAAAGACAATTGGGAAGGTGTTGTACTTAGTCAAAGACTGTAAGTCTTCCTTGTTATTTAAAAAACACCAAAATCAACTAATACCTTATAAGGGTACCGATTGCAGTATTCACGAATACAAAGATGTGGATGTAGAACCGGTTTCATGGAGAGGCAATTTGGCAGCAGAAGAACAATCATCCTCGAATGAAGTGATTCCGATAGACACAGGGGACGAGGAAGAGGACAGGTCTGGTATGGAGGGCAGCTCAGAAAGGGGGGAAGCTACCAATTCTAACGCTTGTGACGATATTAGTTTACCGGTCGAAGTACCTCTCATCACGTCACCGTCCCCGCAGCGGCAAGGAGTCGAGTTAGCAGAAGAGGAGGATGAATTTCTTGAGGCCCTACCAGACCCGTCTGTCGAAGAAGGCTCTGATGACATACCCGCACGACAAAACGCCAGCAGACCTGAGTTTACATCACGGAATAAACGCAATCGGCCTAGGGTTAACTGTAAGCAGTTTTTTTAG
Protein
MSGAMFGLLSSFDHNLQSWETYKCRISQWFVANDISRTSDPAGIKRRAILLSALTDATYKLAADLAVPKTLTDVPYEDILRLLDDHFTPKRCGFGDRYKFYVAVQQEDETYPQWAARLRGLIGHCGFANVEEALRDRFVMGMLPGPEREKLFAQDLTALSLARAVEMAESVRSARVGATTAAVQVAKHGQLFKMTQSTAAGRSGALRLKDGGNKVQCQVCGYHNHDTSQCRNSVHTLTGVSPAELVYGRKLRTRLDQIIPESSSPSSTVLAGVVKFKQCSQNKTKVNKKQSFTKGDLILYKKHTVNGKFIWCKGFIEKTIGKVLYLVKDCKSSLLFKKHQNQLIPYKGTDCSIHEYKDVDVEPVSWRGNLAAEEQSSSNEVIPIDTGDEEEDRSGMEGSSERGEATNSNACDDISLPVEVPLITSPSPQRQGVELAEEEDEFLEALPDPSVEEGSDDIPARQNASRPEFTSRNKRNRPRVNCKQFF

Summary

ProteinModelPortal

Ontologies

GO

Topology

Length:
486
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000560000000000001
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.00030
outside
1  -  486
 
 

Population Genetic Test Statistics

Pi
541.983634
Theta
219.229586
Tajima's D
4.333704
CLR
0.393451
CSRT
0.999750012499375
Interpretation
Uncertain
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