SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08994
Pre Gene Modal
BGIBMGA007750
Annotation
PREDICTED:_uncharacterized_protein_LOC106107944_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.969
 

Sequence

CDS
ATGACTGCTGATAATGAATATCCTAAAGCATCAAATGCTACGCTCATTGGAGCCAGTATCACCTATGTGGGGGCTTTATTTCTCCTCCTTTCATTTGCTGGTCCTTACTGGATGGAATCATATCCAGAAATGTTCTCTCCATTCAAACATATGGGATTGTGGGAGTATTGCTTTGATAATTTCAGGTTCCCTGGTTACCGGTTTGACAAAAAATTTGATGGGTGTCACTATATCTACAGCCAAGAATATTATGCAATCAAGCATTGGCTGTTGCCTGGATGGTTAATGGCTGTGCAGTTTTTCGTGACAGTTGCGCTGATGTTGTCATTTGCAGCCCAGGTTTTATTGGCATGTGTCATTGTTCGTTGGCCATTGAAGACTGTGCTTCGTTATGAATGGATCTTTGTGTTCTATTCATTCATTATGGTAGCAGTTTCTAGTGCTTTCCTCTTTCTTGCTGTGGCAATATTCGGTGGGAACTGCTACAGACGTGACTGGCTCTTGTATCCTTCATTCAATGTTTTGTCTTGGTCCTATGCATTTGCGGTTATTGCCTTTATATTATTTGGTTTGGCATCGATTTTCCTGTATTTGGAGTTTCGAAAATTATATAAACTTCGCTTAGAGGCGAAAAATCTTGTCGCTCAAATGCAACATAGTCAACCTGAACACACCCTTAACCAACTCCGGGACCAATTGCAGCAACAGCAACAGCGTCAGTGGAAATGA
Protein
MTADNEYPKASNATLIGASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDNFRFPGYRFDKKFDGCHYIYSQEYYAIKHWLLPGWLMAVQFFVTVALMLSFAAQVLLACVIVRWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPSFNVLSWSYAFAVIAFILFGLASIFLYLEFRKLYKLRLEAKNLVAQMQHSQPEHTLNQLRDQLQQQQQRQWK

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
BABH01002532    ODYU01008491    SOQ52141.1    RSAL01000996    RVE41000.1    KQ459602    + More
KPI93349.1    KQ460615    KPJ13594.1    GDQN01003317    GDQN01003102    JAT87737.1    JAT87952.1    AGBW02009983    OWR49409.1    NWSH01003076    PCG66997.1    GAIX01007000    JAA85560.1    APCN01003108    AAAB01008844    EAA06100.5    AXCN02001148    ADMH02000438    ETN66489.1    GGFK01004179    MBW37500.1    GGFK01004191    MBW37512.1    ATLV01009963    KE524559    KFB35497.1    GGFM01008305    MBW29056.1    AXCM01001575    GEHC01000357    JAV47288.1    GGFJ01008821    MBW57962.1    GFDF01003874    JAV10210.1    GFDF01003836    JAV10248.1    KQ414584    KOC70621.1    GAPW01003771    GAPW01003770    JAC09827.1    BK008793    CH477331    DAA64998.1    EAT43326.1    KQ434826    KZC07428.1    GANO01004522    JAB55349.1    CVRI01000048    CRK98931.1    KZ288282    PBC29572.1    DS232130    EDS35652.1    GFDL01005727    JAV29318.1    KQ978053    KYM97769.1    KQ435726    KOX78232.1    KK852591    KDR20695.1    GFDF01003840    JAV10244.1    UFQT01000097    SSX19749.1    KK107063    QOIP01000005    EZA61193.1    RLU23078.1    KQ981625    KYN39051.1    APGK01051818    BT127713    KB741207    KB632327    AEE62675.1    ENN72890.1    ERL92505.1    KQ980107    KYN17617.1    GL888480    EGI60251.1    KQ982339    KYQ57352.1    ADTU01015151    GDAI01001139    JAI16464.1    KA648143    AFP62772.1    GBYB01002478    JAG72245.1    KQ971343    EFA04212.1    CH940655    EDW66433.1    GBXI01012720    JAD01572.1    GAMC01008583    JAB97972.1    CH916371    EDV91670.1    GL764074    EFZ18624.1    CH933812    EDW06198.1    LJIG01016418    KRT80660.1    CCAG010006943    CCAG010006944    KQ976574    KYM80310.1    CH964291    EDW86227.1    CH379063    EAL32492.2    CH479190    EDW25876.1    LBMM01000397    KMQ98461.1    NNAY01005071    OXU17041.1    AAZX01013268    CH954183    EDV45484.1    GECU01028266    GECU01019428    GECU01012449    GECU01003961    GECU01003383    JAS79440.1    JAS88278.1    JAS95257.1    JAT03746.1    JAT04324.1    CM000162    EDX00905.1    CH902617    EDV42819.1    OUUW01000011    SPP86291.1    CH480825    EDW43831.1    BT125817    ADR71726.1    AE014298    AL031027    AAF45632.1    AAG22385.2    CAA19840.1    GECL01002737    JAP03387.1    GBHO01029742    GBHO01029741    JAG13862.1    JAG13863.1    GBGD01002797    JAC86092.1    ACPB03020118    GAHY01001551    JAA75959.1    GECZ01015890    JAS53879.1    GDHF01020563    JAI31751.1    NEVH01021187    PNF20147.1    GAKP01006918    JAC52034.1    GBYB01004233    JAG74000.1    DS235291    EEB14475.1    GEZM01092461    JAV56551.1   
Pfam
PF13903   Claudin_2        + More
PF00089   Trypsin
Interpro
IPR004031   PMP22/EMP/MP20/Claudin        + More
IPR033116   TRYPSIN_SER       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
SUPFAM
SSF50494   SSF50494       

Ontologies

Topology

Length:
242
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
92.17056
Exp number, first 60 AAs:
22.71964
Total prob of N-in:
0.99851
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  35
outside
36  -  98
TMhelix
99  -  121
inside
122  -  133
TMhelix
134  -  156
outside
157  -  175
TMhelix
176  -  198
inside
199  -  242
 
 

Population Genetic Test Statistics

Pi
255.125539
Theta
202.583997
Tajima's D
1.158777
CLR
0
CSRT
0.697165141742913
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号