Gene

KWMTBOMO08987

Pre Gene Modal

BGIBMGA007744

Annotation

PREDICTED:_DNA_replication_complex_GINS_protein_SLD5_[Amyelois_transitella]

Location

Bomo_Chr15(+):9226732-9228998      View in EpiBrowser

Full name

DNA replication complex GINS protein SLD5      

Location in the cell

Nuclear   Reliability : 2.92

CDS

ATGGAGTCAACCGAAGAGTTGCAGTTCAGTGATGATGAAGAAGAAGTAACAGCTGAGACTGTTTTAAAAACACTACAAAGTGCTTGGCAAAATGAAAGATTGTCCCCAGAAATACTCCCTCATCAAAATGACATGGTAGAATGTATGTTAGGTCAAATACAACACATGGAAAGAAACATAAATAAACTTTCAAAAACTGATTTGAGAACTTCTATACACAAAATGGAGATTAGCAGAATTAAATTTATTATTTGTAATTATCTTAAAACTAGACTGAATAAGATTGAAAAATATTGCATTCCAATACTAAACCAAGAAAGACAAAGAATAGAAACTGATACTAATTACCTAACACCATCAGAATATAAATATGCTCAAGAATATGTTTTGAACATGGAAAATCATATGAAAAATGTGGTATTAAATAAAATGCCTGGTAATATGCAAGTCTTTGAAATGAACAAAATGGCAGAACATCCTAATTTACAAACGCATGTATTCCTTAAAGCCAATGAAACCATTAATGGGGTTGTATTAGAAGACTTGACTGGTGAAGATGAAGAAATTGACTTAGAAGAGGGCTCGCAGCACATCTTGCAATACAAACCAATTGCAGATCTTTTAAAGAACGGGAAAGTCACATTGTTATGA

Protein

MESTEELQFSDDEEEVTAETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQHMERNINKLSKTDLRTSIHKMEISRIKFIICNYLKTRLNKIEKYCIPILNQERQRIETDTNYLTPSEYKYAQEYVLNMENHMKNVVLNKMPGNMQVFEMNKMAEHPNLQTHVFLKANETINGVVLEDLTGEDEEIDLEEGSQHILQYKPIADLLKNGKVTLL

Description

The GINS complex plays an essential role in the initiation of DNA replication.

Similarity

Belongs to the GINS4/SLD5 family.

Uniprot

A0A2H1X1Y0   A0A2A4J5T9   A0A1E1W923   S4PE03   A0A3S2LUP1   A0A194PQD0   + More
A0A212FAL0   A0A194R8L0   A0A0L7LDW1   A0A158NMW9   A0A067QQL3   A0A195BB37   A0A195EXU9   A0A151IYP1   F4WTF5   A0A195C5J0   A0A026WKZ4   A0A2J7PFE2   A0A3L8E2R1   A0A0J7KB58   A0A151WHL0   A0A0N0BD34   E2AHJ0   E9IWB6   E2C456   A0A2A3ECB9   A0A154PIF3   A0A0L7QKT8   A0A2H8TLL6   A0A1B6I1Q1   K7J574   A0A232ERX6   C4WT18   A0A1B6EQ23   A0A1B6E5G4   A0A2P8YA37   A0A433T9L9   A7SEX8   V9LAY9   A0A3B3RWW1   A0A1S3I1A7   A0A224YND5   A0A3R7Q6B5   W5NGR2   W5UBN9   W5KD60   A0A2Y9FMQ6   A0A3P8YKL2   A0A210PHN6   A0A1W4Z723   A0A3M6V6F8   A0A1S3D044   A0A287BEE8   A0A3B4ED28   A0A384A473   A0A452J6B7   A0A3Q2YIR5   A0A131Z4K9   A0A131XLK3   A0A131Y546   A0A2R8Q9M1   A0A3Q1JKL8   A0A0P7TSJ4   A0A341D1Q8   A0A3B4X869   A0A3B4VDZ8   A0A2Y9MYN2   A0A2U4A8P8   Q6DC44   G3PAY9   A0A060WY14   A0A340X6B7   A0A402EJB1   H9G413   F6XB21   G3PAY7   A0A3B4GI03   A0A3Q2VI21   A0A3Q4HMS7   A0A3P8PD73   A0A3P9BYY3   A0A1E1XFM3   A0A2B4SK78   A0A3B5BDP0   A0A1A8G281   A0A1A8I1R0   A0A1A8C6X8   A0A1A8AL57   A0A3Q1HGD0   A0A3Q1ALI8   A0A3P8T4R5   A0A1B0GJX3   A0A3B4BBB3   I3JWY1   A0A023FG22   A0A091VCW5   A0A2U9BRI2   A0A1A8QHU8   A0A3Q3LSG9   A0A2D4NKZ3  

Pubmed

23622113    26354079    22118469    26227816    21347285    24845553    + More
21719571    24508170    30249741    20798317    21282665    20075255    28648823    29403074    17615350    24402279    29240929    28797301    23127152    25329095    25069045    28812685    30382153    30723633    28562605    26830274    28049606    23594743    24755649    21881562    18464734    25186727    28503490    25463417   

EMBL

ODYU01012831    SOQ59331.1    NWSH01003134    PCG66894.1    GDQN01007693    JAT83361.1    + More
GAIX01003411    JAA89149.1    RSAL01000187    RVE44779.1    KQ459602    KPI93340.1    AGBW02009451    OWR50776.1    KQ460615    KPJ13585.1    JTDY01001605    KOB73391.1    ADTU01020829    KK853083    KDR11621.1    KQ976529    KYM81766.1    KQ981940    KYN32704.1    KQ980745    KYN13669.1    GL888334    EGI62547.1    KQ978231    KYM96119.1    KK107159    EZA56727.1    NEVH01025663    PNF15054.1    QOIP01000001    RLU26994.1    LBMM01010369    KMQ87509.1    KQ983115    KYQ47298.1    KQ435879    KOX69881.1    GL439548    EFN67093.1    GL766486    EFZ15131.1    GL452396    EFN77285.1    KZ288287    PBC29423.1    KQ434902    KZC11098.1    KQ414940    KOC59209.1    GFXV01000937    GFXV01003124    MBW12742.1    MBW14929.1    GECU01026882    JAS80824.1    AAZX01000336    NNAY01002545    OXU21091.1    ABLF02027798    AK340425    BAH71038.1    GECZ01029740    JAS40029.1    GEDC01031352    GEDC01004122    GEDC01003420    JAS05946.1    JAS33176.1    JAS33878.1    PYGN01000761    PSN41122.1    RQTK01000523    RUS78246.1    DS469640    EDO37714.1    JW876810    AFP09327.1    GFPF01007972    MAA19118.1    QCYY01002528    ROT69702.1    AHAT01008509    JT411270    AHH39363.1    NEDP02076689    OWF35991.1    RCHS01000010    RMX61461.1    AEMK02000105    DQIR01095044    DQIR01208250    DQIR01215759    DQIR01218694    DQIR01220794    DQIR01251833    DQIR01263257    HDA50520.1    GEDV01002243    JAP86314.1    GEFH01000197    JAP68384.1    GEFM01002630    JAP73166.1    CABZ01070468    JARO02010440    KPP60690.1    BC078242    BC131877    AAH78242.1    FR904670    CDQ69490.1    BDOT01000015    GCF44305.1    AAWZ02030553    AAPN01429195    AAPN01429196    GFAC01001146    JAT98042.1    LSMT01000060    PFX29776.1    HAEB01017947    SBQ64474.1    HAED01004736    SBQ90766.1    HADZ01011403    HAEA01008077    SBP75344.1    HADY01017284    HAEJ01007092    SBP55769.1    AJWK01022430    AERX01013610    GBBK01003551    JAC20931.1    KL410942    KFR01212.1    CP026251    AWP06818.1    HAEG01012854    SBR93415.1    IACN01006882    IACN01006883    IACN01006884    IACN01006885    IACN01006886    IACN01006887    IACN01006888    LAB46391.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000007151    UP000053240    UP000037510    + More
UP000005205    UP000027135    UP000078540    UP000078541    UP000078492    UP000007755    UP000078542    UP000053097    UP000235965    UP000279307    UP000036403    UP000075809    UP000053105    UP000000311    UP000008237    UP000242457    UP000076502    UP000053825    UP000002358    UP000215335    UP000007819    UP000245037    UP000271974    UP000001593    UP000261540    UP000085678    UP000283509    UP000018468    UP000221080    UP000018467    UP000248484    UP000265140    UP000242188    UP000192224    UP000275408    UP000079169    UP000008227    UP000261440    UP000261681    UP000291020    UP000264820    UP000000437    UP000265040    UP000034805    UP000252040    UP000261360    UP000261420    UP000248483    UP000245320    UP000007635    UP000193380    UP000265300    UP000288954    UP000001646    UP000002279    UP000261460    UP000264840    UP000261580    UP000265100    UP000265160    UP000225706    UP000261400    UP000257200    UP000257160    UP000265080    UP000092461    UP000261520    UP000005207    UP000053283    UP000246464    UP000261640   

Pfam

PF16922   SLD5_C        + More
PF05916   Sld5

Interpro

IPR008591   GINS_Sld5        + More
IPR031633   SLD5_C       
IPR038749   Sld5_GINS_A       
IPR021151   GINS_A       
IPR036224   GINS_bundle-like_dom_sf       

SUPFAM

SSF158573   SSF158573       

CDD

cd11711  GINS_A_Sld5

ProteinModelPortal

A0A2H1X1Y0   A0A2A4J5T9   A0A1E1W923   S4PE03   A0A3S2LUP1   A0A194PQD0   + More
A0A212FAL0   A0A194R8L0   A0A0L7LDW1   A0A158NMW9   A0A067QQL3   A0A195BB37   A0A195EXU9   A0A151IYP1   F4WTF5   A0A195C5J0   A0A026WKZ4   A0A2J7PFE2   A0A3L8E2R1   A0A0J7KB58   A0A151WHL0   A0A0N0BD34   E2AHJ0   E9IWB6   E2C456   A0A2A3ECB9   A0A154PIF3   A0A0L7QKT8   A0A2H8TLL6   A0A1B6I1Q1   K7J574   A0A232ERX6   C4WT18   A0A1B6EQ23   A0A1B6E5G4   A0A2P8YA37   A0A433T9L9   A7SEX8   V9LAY9   A0A3B3RWW1   A0A1S3I1A7   A0A224YND5   A0A3R7Q6B5   W5NGR2   W5UBN9   W5KD60   A0A2Y9FMQ6   A0A3P8YKL2   A0A210PHN6   A0A1W4Z723   A0A3M6V6F8   A0A1S3D044   A0A287BEE8   A0A3B4ED28   A0A384A473   A0A452J6B7   A0A3Q2YIR5   A0A131Z4K9   A0A131XLK3   A0A131Y546   A0A2R8Q9M1   A0A3Q1JKL8   A0A0P7TSJ4   A0A341D1Q8   A0A3B4X869   A0A3B4VDZ8   A0A2Y9MYN2   A0A2U4A8P8   Q6DC44   G3PAY9   A0A060WY14   A0A340X6B7   A0A402EJB1   H9G413   F6XB21   G3PAY7   A0A3B4GI03   A0A3Q2VI21   A0A3Q4HMS7   A0A3P8PD73   A0A3P9BYY3   A0A1E1XFM3   A0A2B4SK78   A0A3B5BDP0   A0A1A8G281   A0A1A8I1R0   A0A1A8C6X8   A0A1A8AL57   A0A3Q1HGD0   A0A3Q1ALI8   A0A3P8T4R5   A0A1B0GJX3   A0A3B4BBB3   I3JWY1   A0A023FG22   A0A091VCW5   A0A2U9BRI2   A0A1A8QHU8   A0A3Q3LSG9   A0A2D4NKZ3  

PDB

2Q9Q     E-value=1.00818e-37,     Score=390

KEGG

101744802    K10735 GINS complex subunit 4 | (RefSeq) DNA replication complex GINS protein SLD5

GO

GO:0005634   GO:0006261   GO:0006260   GO:0031298   GO:0000811   GO:0000727   GO:0032508   GO:0005737   GO:0001833  

PANTHER

PTHR21206  

Subcellular location

Nucleus  

Length:

216

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02742

outside

1  -  216

 

 

Pi

299.490478

Theta

196.470316

Tajima's D

1.627965

CLR

0

CSRT

0.813109344532773

Interpretation

Uncertain