Gene

KWMTBOMO08985

Pre Gene Modal

BGIBMGA007787

Annotation

ceropsin_[Bombyx_mori]

Location

Bomo_Chr15(-):9211931-9215341      View in EpiBrowser

Full name

Ceropsin       + More
Opsin-1      

Alternative Name

Cerebral opsin
Rhodopsin 1, long-wavelength
Rhodopsin P520

Location in the cell

PlasmaMembrane   Reliability : 4.961

CDS

ATGGACGCCGGTCCAGGCTTCGCAGCCCTACAGTCATGGAGCAGCCAAGTGGCAGCATTTGGAAACTCCAACCAAACCGTGGTGGACAGAGTTTCGCCAGAAATGTTACATTTGATCGACGCTTACTGGTATCAATTTCCGCCCATGAATCCCTTATGGCATGCGCTATTGGGTTTTACCATTGGAGTCCTCGGTTTCATTTCAATGATGGGCAACGGTATGGTCATTTACATCTTCATGACAACAAAGAATCTGAAAACACCATCGAACTTACTCGTAGTGAACTTAGCATTTTCTGATTTCCTAATGATGTGTGCCATGTCTCCAGCTATGGTAATTAATTGTTACAATGAAACTTGGGTTTTCGGACCATTCGCGTGTGAGCTATACGGTTGCGCTGGATCGCTATTTGGGTGTGCTTCAATTTGGACGATGACAATGATCGCTTTCGACCGCTATAATGTTATTGTGAAGGGAATTGCGGCAAAACCAATGACAAACAACGGAGCTCTTCTACGAATTCTCGGAATCTGGGCCTTCTCGTTGGCATGGACAGTGGCACCTTTCTTCGGTTGGAACAGATACGTACCTGAAGGTAATATGACTGCATGCGGTACTGACTACCTGACCAAAGATTGGTTTAGCCGAAGCTACATCGTTGTCTATTCCGTTTTTGTTTACTTTGCCCCGTTGCTTCTGATCGTCTACTCTTATTACTACATTGTACAGGCTGTGTCTGCTCACGAAAAAGCAATGAGGGAACAAGCGAAGAAAATGAACGTGGCATCTCTTAGATCGTCGGAAGCTGCTAACACTAGCACTGAATGTAAGCTAGCTAAGGTGGCACTTATGACAATTTCTCTGTGGTTCATGGCCTGGACACCTTACTTAGTCATCAACTACACAGGAATATTGGAAAGCGCTCCAATCAGTCCTTTGGCTACTATCTGGGGCTCACTCTTTGCCAAAGCTAATGCTGTATATAATCCGATTGTATATGGTATCAGCCACCCTAAATACCAAGCTGCTCTGTACAAAAGATTCCCAGTGCTTCAATGCCACTCAACGACTACCGATGAGGCCAGCTCTGTAGCTTCAGGCACTACTGTCATGGAAGAGAAACCGACAGCATAA

Protein

MDAGPGFAALQSWSSQVAAFGNSNQTVVDRVSPEMLHLIDAYWYQFPPMNPLWHALLGFTIGVLGFISMMGNGMVIYIFMTTKNLKTPSNLLVVNLAFSDFLMMCAMSPAMVINCYNETWVFGPFACELYGCAGSLFGCASIWTMTMIAFDRYNVIVKGIAAKPMTNNGALLRILGIWAFSLAWTVAPFFGWNRYVPEGNMTACGTDYLTKDWFSRSYIVVYSVFVYFAPLLLIVYSYYYIVQAVSAHEKAMREQAKKMNVASLRSSEAANTSTECKLAKVALMTISLWFMAWTPYLVINYTGILESAPISPLATIWGSLFAKANAVYNPIVYGISHPKYQAALYKRFPVLQCHSTTTDEASSVASGTTVMEEKPTA

Description

Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal. May play a role in photoperiodic photoreception.

Similarity

Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
Belongs to the G-protein coupled receptor 1 family.

Keywords

Chromophore   Complete proteome   Disulfide bond   G-protein coupled receptor   Glycoprotein   Membrane   Photoreceptor protein   Receptor   Reference proteome   Retinal protein   Sensory transduction   Transducer   Transmembrane   Transmembrane helix   Vision  

Feature

chain  Ceropsin

Uniprot

Q95YI3   H9JE40   H9JE39   Q86M48   V5L9G7   V5L8P9   + More
V5L9H5   V5LAJ1   V5L909   V5L913   M9Q2H1   A0A2A4JXN8   V5L8Q3   V5LAJ9   V5L9D1   O02464   V5L9H0   A0A0L7LD02   A0A1I9W2P6   A0A0A7DWF7   A0A2H1V034   V5L9D5   V5LAJ4   A0A0A7DWF4   A0A068PTN4   A0A068PTN0   A0A068PTN8   G9B4U3   A0A068PTQ7   A0A194PRB8   A0A068PT89   A0A194PSQ2   A0A068PT86   A0A068PT93   A0A1Y0AXW6   E2DZN4   G9B4U4   O76124   A0A1Y0AXU0   E1CG99   M1VPI5   A0A1Y0AY39   A0A1Y0AY98   E2DZP4   A0A1Y0AYH2   A0A1Y0AYG8   A0A1Y0AY61   E2DZN5   A0A1Y0AY05   E2DZP0   A0A068PU89   Q53AD0   Q9UAM7   A0A1Y0AYG2   A0A2S3SHS5   Q5EU92   Q1JQE9   A0A1Y0AY75   A0A1Y0AY70   Q8WS27   G9B4U2   A0A1Y0AYC1   C4MF32   A0A1Y0AXZ5   I6LEN1   A0A1Y0AXX3   A0A1Y0AY64   E2DZN9   A0A1Y0AYH8   E2DZN6   A0A1Y0AXX7   E2DZN2   E2DZP3   E2DZP2   A0A1Y0AYB9   C4MEB8   A0A1Y0AY97   A0A068PTR1   A0A1Y0AYB5   E2DZN8   A0A194R7V0   M1V4D4   A0A068PTQ3   A8DQY6   I6LEN2   A0A1Y0AY71   E2DZN3   E2DZN7   E2DZP1   Q76L21   A8DQZ7   R4GUQ2   A0A1Y0AY36   A0A1Y0AY99   O76123   A0A1Y0AY96   C4XV73   A0A194PRA1   A0A1B0D995   A8DQZ6  

Pubmed

11549248    19121390    24205129    9343857    12939366    26227816    + More
27777631    26354079    28505307    20478921    9547302    21075944    15882645    9484709    10948267    29358930    15695761    16651559    11719576    17609538    17494749    15235009   

EMBL

AB064496    AB184967    BAB63283.1    BAF73627.1    BABH01002546    BABH01002547    + More
BABH01002545    AB073299    BAC66474.1    KF539439    AHA48183.1    KF539440    AHA48184.1    KF539449    AHA48193.1    KF539438    AHA48182.1    KF539441    RSAL01000187    AHA48185.1    RVE44778.1    KF539446    AHA48190.1    JX392054    AGH28027.1    NWSH01000412    PCG76569.1    KF539445    AHA48189.1    KF539448    AHA48192.1    KF539442    AHA48186.1    L78080    AAD11964.1    KF539444    AHA48188.1    JTDY01001605    KOB73388.1    KX828983    APA21080.1    KJ010188    AIY31989.1    ODYU01000073    SOQ34213.1    KF539447    AHA48191.1    KF539443    AHA48187.1    KJ010187    AIY31988.1    AB725199    BAP11256.1    AB725194    BAP11251.1    AB725204    BAP11261.1    HM366560    AEG80176.1    AB725229    BAP11286.1    KQ459595    KPI95996.1    AB725213    BAP11270.1    KPI95998.1    AB725208    BAP11265.1    AB725218    BAP11275.1    MF035501    ART29886.1    GU324695    ADN96759.1    HM366561    AEG80177.1    AB007424    KQ459602    BAA31722.1    KPI93339.1    MF035495    MF035498    ART29880.1    ART29883.1    AB540941    BAJ22053.1    AB721382    BAM95292.1    MF035571    ART29956.1    MF035616    MF035620    MF035623    MF035626    ART30000.1    ART30004.1    ART30007.1    ART30010.1    GU324705    MF035680    MF035683    ADN96769.1    ART30064.1    ART30067.1    MF035687    MF035691    MF035694    MF035701    MF035704    MF035708    ART30071.1    ART30075.1    ART30078.1    ART30085.1    ART30088.1    ART30092.1    MF035712    ART30096.1    MF035604    ART29988.1    GU324696    MF035515    MF035518    MF035521    MF035525    ADN96760.1    ART29900.1    ART29903.1    ART29906.1    ART29910.1    MF035529    MF035536    MF035539    ART29914.1    ART29921.1    ART29924.1    GU324701    MF035630    ADN96765.1    ART30014.1    AB725222    BAP11279.1    AY605545    AAU07978.1    AF077190    AAD34221.1    MF035698    ART30082.1    PDGJ01000078    POC59217.1    AY740907    AAU93395.1    AY918907    AAY16540.1    MF035574    MF035577    ART29959.1    ART29962.1    MF035581    MF035585    ART29966.1    ART29970.1    AF385333    AAL59879.2    HM366559    AEG80175.1    MF035657    ART30041.1    EU480690    ACC77726.1    MF035533    ART29918.1    AY918895    AAY16528.1    MF035507    MF035511    ART29892.1    ART29896.1    MF035592    MF035596    MF035600    ART29977.1    ART29981.1    ART29985.1    GU324700    MF035589    ADN96764.1    ART29974.1    MF035719    ART30103.1    GU324697    ADN96761.1    MF035504    ART29889.1    GU324693    ADN96757.1    GU324704    ADN96768.1    GU324703    MF035665    MF035668    MF035672    MF035676    ADN96767.1    ART30049.1    ART30052.1    ART30056.1    ART30060.1    MF035653    MF035661    ART30037.1    ART30045.1    EU352197    ABY84497.1    MF035640    MF035643    ART30024.1    ART30027.1    AB725234    BAP11291.1    MF035649    ART30033.1    GU324699    ADN96763.1    KQ460615    KPJ13584.1    AB721386    BAM95296.1    AB725224    BAP11281.1    DQ924367    ABI97866.1    AY918903    AAY16536.1    MF035608    MF035612    ART29992.1    ART29996.1    GU324694    ADN96758.1    GU324698    MF035543    MF035547    MF035551    MF035555    MF035559    MF035563    ADN96762.1    ART29928.1    ART29932.1    ART29936.1    ART29940.1    ART29944.1    ART29948.1    GU324702    ADN96766.1    AB086066    AB188567    AB177984    BAD06459.1    BAD36899.1    BAD66860.1    DQ924378    ABI97877.1    EU352196    ABY84496.1    MF035567    ART29952.1    MF035637    ART30021.1    AB007423    BAA31721.1    MF035633    ART30017.1    AY918900    AAY16533.1    KPI95837.1    AJVK01004280    DQ924377    ABI97876.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000037510    UP000053268    UP000237283    + More
UP000053240    UP000092462   

PRIDE

Q95YI3    H9JE40    H9JE39    O02464   

Pfam

PF00001   7tm_1

Interpro

IPR017452   GPCR_Rhodpsn_7TM        + More
IPR001760   Opsin       
IPR000276   GPCR_Rhodpsn       
IPR027430   Retinal_BS       
IPR001391   Opsin_lateye       

ProteinModelPortal

Q95YI3   H9JE40   H9JE39   Q86M48   V5L9G7   V5L8P9   + More
V5L9H5   V5LAJ1   V5L909   V5L913   M9Q2H1   A0A2A4JXN8   V5L8Q3   V5LAJ9   V5L9D1   O02464   V5L9H0   A0A0L7LD02   A0A1I9W2P6   A0A0A7DWF7   A0A2H1V034   V5L9D5   V5LAJ4   A0A0A7DWF4   A0A068PTN4   A0A068PTN0   A0A068PTN8   G9B4U3   A0A068PTQ7   A0A194PRB8   A0A068PT89   A0A194PSQ2   A0A068PT86   A0A068PT93   A0A1Y0AXW6   E2DZN4   G9B4U4   O76124   A0A1Y0AXU0   E1CG99   M1VPI5   A0A1Y0AY39   A0A1Y0AY98   E2DZP4   A0A1Y0AYH2   A0A1Y0AYG8   A0A1Y0AY61   E2DZN5   A0A1Y0AY05   E2DZP0   A0A068PU89   Q53AD0   Q9UAM7   A0A1Y0AYG2   A0A2S3SHS5   Q5EU92   Q1JQE9   A0A1Y0AY75   A0A1Y0AY70   Q8WS27   G9B4U2   A0A1Y0AYC1   C4MF32   A0A1Y0AXZ5   I6LEN1   A0A1Y0AXX3   A0A1Y0AY64   E2DZN9   A0A1Y0AYH8   E2DZN6   A0A1Y0AXX7   E2DZN2   E2DZP3   E2DZP2   A0A1Y0AYB9   C4MEB8   A0A1Y0AY97   A0A068PTR1   A0A1Y0AYB5   E2DZN8   A0A194R7V0   M1V4D4   A0A068PTQ3   A8DQY6   I6LEN2   A0A1Y0AY71   E2DZN3   E2DZN7   E2DZP1   Q76L21   A8DQZ7   R4GUQ2   A0A1Y0AY36   A0A1Y0AY99   O76123   A0A1Y0AY96   C4XV73   A0A194PRA1   A0A1B0D995   A8DQZ6  

PDB

2ZIY     E-value=1.31398e-48,     Score=487

KEGG

692426    K04255 r-opsin | (RefSeq) Cop, Bcop, Ceropsin; cerebral opsin

GO

GO:0018298   GO:0004930   GO:0007601   GO:0016021   GO:0007602   GO:0009881   GO:0007186   GO:0008237   GO:0008270   GO:0043565   GO:0016876   GO:0043039  

Subcellular location

Membrane  

Length:

377

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

154.2914

Exp number, first 60 AAs:

4.91188

Total prob of N-in:

0.00027

outside

1  -  56

TMhelix

57  -  79

inside

80  -  90

TMhelix

91  -  113

outside

114  -  127

TMhelix

128  -  150

inside

151  -  169

TMhelix

170  -  192

outside

193  -  217

TMhelix

218  -  240

inside

241  -  280

TMhelix

281  -  303

outside

304  -  312

TMhelix

313  -  335

inside

336  -  377

 

 

Pi

236.846479

Theta

178.753764

Tajima's D

1.067394

CLR

0

CSRT

0.684665766711664

Interpretation

Uncertain