Gene

KWMTBOMO08982

Annotation

PREDICTED:_uncharacterized_protein_LOC105842017_[Bombyx_mori]

Location

Bomo_Chr15(+):9171313-9172556      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.832

CDS

ATGTCGCTACCCGAAAGTGGAAATACTCCAACATCAGAAGAGGGAACACCACGTGACGAACAACGGCCTAATGACGTAATCCAAGCTATGGCAGACGCATTTAAAACCACGATGAACGATATGATGACTCAACTGTCTTACGATCATCGCGTAACCTTGACTGAAATGATCAGCTCCATGAAATCAGAAGAAAATACGCGAGTGCGCATTGCCGACATTTATTTTCCTACATATGACCCCGATTCTAGTACCGATGTACACGATTGGGTAGATCTTATTACACGTACTCAAGCAGAATATGGACTTCGAGATCATGAGGTACGATTAAAAGCAGCAAGTGTATTAAAAGGTCGTGCAAAGACATGGGCAGATAGTAGCCTCCTAAGGACAACAACCTGGACGGAAATGCGGGATGACATGTTGCAAACTTTCGAACCCGAATCCAGGTACTTTGCAGATATTCTGAGTTATAGAAATTACACCATTGACAAGGCAGAAAACATTCAAGATTTTATTTCAAACGTGTGGCGTATGTTCAAAAGGATAGTAAAATCTAATCCAACGGAACAGGATGCAGTAGAATTTGTCATTGGGAGCATTGGAGATGAACGGATTCGGACAGAACTGCTCAATAGCAAGTCAAATACTGTTCCGGAGTTAATTGCTATAGCCAAAACGTTTCGCAAACGAAAGAATATACCAACTCAACCGACTGAGTTCAGTAAGCAACCTCGTTTGAACTTCAATCGTGATAGATCCAACTTGACTTGTCATGTTTGTGGAAAAACAGGTCATTTTGCTGGATATTGCCCGGAAAATGCAATTCGACGTGGAACGTTTTCAGCATCAGGATCAGGAGCTTCTTTCTCATCAAGAGATTCGCCTGCACCATCCATTAAGGAGTGTTCCTACTGTAAAGGGACTCGACACACTACAGAAAGATGTTTTAAAAGAATTGCTGACGAACAACACAGTAAAACAGTGAATCTATGA

Protein

MSLPESGNTPTSEEGTPRDEQRPNDVIQAMADAFKTTMNDMMTQLSYDHRVTLTEMISSMKSEENTRVRIADIYFPTYDPDSSTDVHDWVDLITRTQAEYGLRDHEVRLKAASVLKGRAKTWADSSLLRTTTWTEMRDDMLQTFEPESRYFADILSYRNYTIDKAENIQDFISNVWRMFKRIVKSNPTEQDAVEFVIGSIGDERIRTELLNSKSNTVPELIAIAKTFRKRKNIPTQPTEFSKQPRLNFNRDRSNLTCHVCGKTGHFAGYCPENAIRRGTFSASGSGASFSSRDSPAPSIKECSYCKGTRHTTERCFKRIADEQHSKTVNL

Uniprot

A0A2A4JE79   H9JLH1   A0A2H1WS63   V5G372   A0A2H1WGG1   A0A2H1WBQ7   + More
A0A0L7LE80   A0A1E1WCE6   A0A1E1WH94   B7S8P8   Q24310   A0A2H1WRW1   A0A1Y1KXP4   A0A0A9WAU2   A0A2H1VPA2   A0A2H1X3U8   A0A212FFF0   A0A2I4ARU7   A0A1E1WNL0   A0A0A9WXF0   A0A1Y1M038   H9JWG8   A0A146KPX1   D6X3M0   A0A1Y1MHG9   A0A2A4JLK4   A0A2A4K5M9   A0A182H9S7   V5I9Y9   A0A0A9YDB1   D2A5M2   A0A1W4XE03   A0A146L933   A0A2W1C2A3   A0A0A9WTW7   A0A0A9X1Z8   A0A1Y1NEP2   A0A2A4J968   A0A0P9BSR3   W2W3G9   A0A0J7K8B9   A0A146M2J2   A0A0A9X280   A0A2A4ISU1  

Pubmed

19121390    26227816    2464689    28004739    25401762    22118469    + More
26823975    18362917    19820115    26483478    28756777    17994087   

EMBL

NWSH01001784    PCG70139.1    BABH01005776    BABH01005777    BABH01005778    BABH01005779    + More
ODYU01010650    SOQ55901.1    GALX01004016    JAB64450.1    ODYU01008498    SOQ52151.1    ODYU01007591    SOQ50498.1    JTDY01001444    KOB73848.1    GDQN01006390    JAT84664.1    GDQN01004694    GDQN01000397    JAT86360.1    JAT90657.1    EF710649    ACE75273.1    X14037    CAA32198.1    ODYU01010203    SOQ55164.1    GEZM01075334    JAV64136.1    GBHO01040011    JAG03593.1    ODYU01003642    SOQ42653.1    ODYU01013294    SOQ60001.1    AGBW02008828    OWR52464.1    GDQN01002470    JAT88584.1    GBHO01032416    JAG11188.1    GEZM01045832    JAV77665.1    BABH01029403    BABH01029404    BABH01029405    BABH01029406    GDHC01020530    JAP98098.1    KQ971375    EEZ97626.2    GEZM01033082    GEZM01033081    GEZM01033080    JAV84428.1    NWSH01001094    PCG72656.1    NWSH01000145    PCG79083.1    JXUM01273089    KQ652564    KXJ62316.1    GALX01002105    JAB66361.1    GBHO01013472    GBHO01013470    JAG30132.1    JAG30134.1    KQ971345    EFA05053.1    GDHC01015012    JAQ03617.1    KZ149907    PZC78253.1    GBHO01032415    JAG11189.1    GBHO01030786    JAG12818.1    GEZM01007616    GEZM01007615    GEZM01007614    GEZM01007613    GEZM01007612    GEZM01007611    JAV95055.1    NWSH01002289    PCG68667.1    CH902641    KPU74713.1    ANIX01003619    ETP05092.1    LBMM01011887    KMQ86572.1    GDHC01004980    JAQ13649.1    GBHO01032414    JAG11190.1    NWSH01007700    PCG62845.1   

Proteomes

UP000218220    UP000005204    UP000037510    UP000007151    UP000192220    UP000007266    + More
UP000069940    UP000249989    UP000192223    UP000007801    UP000018958    UP000036403   

PRIDE

H9JLH1    Q24310    H9JWG8   

Pfam

PF03732   Retrotrans_gag        + More
PF14844   PH_BEACH
PF00077   RVP
PF00078   RVT_1
PF17921   Integrase_H2C2
PF17919   RT_RNaseH_2
PF00665   rve
PF00098   zf-CCHC
PF17917   RT_RNaseH
PF02037   SAP

Interpro

IPR005162   Retrotrans_gag_dom        + More
IPR036875   Znf_CCHC_sf       
IPR023362   PH-BEACH_dom       
IPR016024   ARM-type_fold       
IPR013320   ConA-like_dom_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR018061   Retropepsins       
IPR001878   Znf_CCHC       
IPR001969   Aspartic_peptidase_AS       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR012337   RNaseH-like_sf       
IPR001995   Peptidase_A2_cat       
IPR001584   Integrase_cat-core       
IPR041577   RT_RNaseH_2       
IPR041373   RT_RNaseH       
IPR003034   SAP_dom       
IPR036361   SAP_dom_sf       
IPR032567   LDOC1-rel       

SUPFAM

SSF57756   SSF57756        + More
SSF49899   SSF49899       
SSF48371   SSF48371       
SSF50630   SSF50630       
SSF53098   SSF53098       
SSF68906   SSF68906       

Gene 3D

2.40.70.10     3.30.420.10     1.10.720.30    

CDD

cd01201  PH_BEACH

ProteinModelPortal

A0A2A4JE79   H9JLH1   A0A2H1WS63   V5G372   A0A2H1WGG1   A0A2H1WBQ7   + More
A0A0L7LE80   A0A1E1WCE6   A0A1E1WH94   B7S8P8   Q24310   A0A2H1WRW1   A0A1Y1KXP4   A0A0A9WAU2   A0A2H1VPA2   A0A2H1X3U8   A0A212FFF0   A0A2I4ARU7   A0A1E1WNL0   A0A0A9WXF0   A0A1Y1M038   H9JWG8   A0A146KPX1   D6X3M0   A0A1Y1MHG9   A0A2A4JLK4   A0A2A4K5M9   A0A182H9S7   V5I9Y9   A0A0A9YDB1   D2A5M2   A0A1W4XE03   A0A146L933   A0A2W1C2A3   A0A0A9WTW7   A0A0A9X1Z8   A0A1Y1NEP2   A0A2A4J968   A0A0P9BSR3   W2W3G9   A0A0J7K8B9   A0A146M2J2   A0A0A9X280   A0A2A4ISU1  

KEGG

105842017    no KO assigned | (RefSeq) uncharacterized LOC105842017

GO

GO:0008270   GO:0003676   GO:0004190   GO:0015074   GO:0008233   GO:0003964   GO:0042626   GO:0016887   GO:0008237   GO:0043565   GO:0016876   GO:0043039  

PANTHER

PTHR15503  

Length:

330

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00424

outside

1  -  330

 

 

Pi

472.79466

Theta

250.423345

Tajima's D

2.797287

CLR

0

CSRT

0.969351532423379

Interpretation

Uncertain