Gene

KWMTBOMO08979

Annotation

PREDICTED:_uncharacterized_protein_C9orf85_homolog_[Amyelois_transitella]

Location

Bomo_Chr15(-):9155924-9159242      View in EpiBrowser

Full name

Uncharacterized protein C9orf85      

Location in the cell

Nuclear   Reliability : 4.058

CDS

ATGAGTTTATCCAGAGGAAATACTAATAGAACGAGACCGCAAAAACACCAAAACCGGGCAGCTTTCAAGAACGATTTGCATGATACGAGCCACAAAACTAAATTTATAAATTCTTTAGAAATACGTGGTGTTTGTCAACGATGCAAAAACATTCTCGAATGGAAGATTAAATATAAAAAATATAAACCACTTGCAGTGCCTACTAAATGCACGAGTTGTTTAGAGAAGACTGTAAAACACGCATATCACGTTTTGTGCTCCAAATGTGCTTCTGAAAAAGAAGTTTGCGCAAAATGTTGTCAAAATATAAATATAGAAAAACAAGAAGACAAAAAAACTGACATTTTGGGTAAATTAAGTGGTTTGTCAGAAAGAAAGCGTAGAACAGTTCTTAGGTATCTCAAAAACCAAGAAGATGGTACACAGAAAAAAACGCCAGCATCAATTAAAACTATTGATGAAATATTATCACAGATGGATAAAATGGATTTGAAAAATGATGATGATGATTTTAAGTTTTCTAGTGATGAATATAGTGATTCTGATAGTGTACTTGGAAAATAG

Protein

MSLSRGNTNRTRPQKHQNRAAFKNDLHDTSHKTKFINSLEIRGVCQRCKNILEWKIKYKKYKPLAVPTKCTSCLEKTVKHAYHVLCSKCASEKEVCAKCCQNINIEKQEDKKTDILGKLSGLSERKRRTVLRYLKNQEDGTQKKTPASIKTIDEILSQMDKMDLKNDDDDFKFSSDEYSDSDSVLGK

Keywords

Acetylation   Alternative splicing   Complete proteome   Phosphoprotein   Reference proteome  

Feature

chain  Uncharacterized protein C9orf85
splice variant  In isoform 3.

Uniprot

A0A0L7LC64   A0A2A4JX38   A0A212FAL7   A0A2H1X1L4   A0A194R7F2   A0A194PIT4   + More
A0A3S2NP22   S4NU36   A0A088AMR1   K7J5X2   E2C5F5   A0A232EPF9   A0A2A3E3X1   V9IKI3   A0A026WRL8   A0A0L7QP13   A0A1Y1M889   A0A1Y1M306   A0A3L8DFG9   E9J6F0   A0A1S3HTJ1   A0A1S3IXS3   D7EJD6   A0A151XJ01   A0A195CPL9   A0A158NEG5   A0A195BWX6   A0A195EN03   A0A195FKD2   A0A139WIG2   A0A433TM99   A0A034WUH7   W8BXG1   R4V1M7   A0A0K8UR54   A0A1I8Q5P0   A0A2P8YUC5   A0A0R3TJU1   A0A1B0GEH9   A0A0A1XL49   E9GYL3   A0A3B0JCY4   A0A2C9LIY5   J3JU41   A0A0P4WEY0   A0A2B4SKJ7   A0A0P5JPR2   A0A1A9UZN0   A0A0P5HLR5   A0A0P5I3N4   A0A0P5HP01   B4GYA5   Q29HU0   A0A0P5FW82   A0A0P5VEZ2   A0A162SPD2   A0A0P5SMI3   A0A0P6FJV0   A0A0P5CK13   A0A0P5KJH5   A0A0P5A9J6   A0A0N8C7Z4   A0A3M6UJ23   A0A0P6DK26   A0A0P5RBP9   B3MW41   A0A0P6DLJ9   B4NC81   B4JKE5   A0A1W4VWY5   A0A0P5KUT1   A0A0L0BQP6   A0A1S3CZ51   A0A0M4EU04   T1P7V9   A0A336KFA0   A0A0B6YYD5   A0A336LZB4   W4YCB8   A0A1A9X269   B4L3I3   A0A0P6HAV6   A0A1I8MRJ1   A0A1J1IWH0   A0A182IUQ1   A0A2K6JMI2   A0A2I3FSP9   A0A3P7KXU5   Q96MD7-1   A0A2R9C0E2  

Pubmed

26227816    22118469    26354079    23622113    20075255    20798317    + More
28648823    24508170    28004739    30249741    21282665    18362917    19820115    21347285    25348373    24495485    29403074    25830018    21292972    15562597    22516182    17994087    15632085    30382153    26108605    25315136    14702039    15164053    15489334    18669648    19690332    22814378    22722832   

EMBL

JTDY01001720    KOB73083.1    NWSH01000412    PCG76577.1    AGBW02009451    OWR50784.1    + More
ODYU01012739    SOQ59199.1    KQ460615    KPJ13577.1    KQ459602    KPI93331.1    RSAL01000187    RVE44786.1    GAIX01011966    JAA80594.1    GL452770    EFN76768.1    NNAY01002936    OXU20269.1    KZ288433    PBC25781.1    JR051735    AEY61550.1    KK107119    EZA58685.1    KQ414843    KOC60319.1    GEZM01041823    JAV80136.1    GEZM01041822    JAV80139.1    QOIP01000009    RLU18649.1    GL768246    EFZ11605.1    KQ971341    KYB27723.1    KQ982080    KYQ60393.1    KQ977444    KYN02656.1    ADTU01013294    KQ976401    KYM92473.1    KQ978625    KYN29660.1    KQ981490    KYN41125.1    KYB27722.1    RQTK01000275    RUS82709.1    GAKP01000673    JAC58279.1    GAMC01000520    JAC06036.1    KC740758    AGM32582.1    GDHF01023248    JAI29066.1    PYGN01000354    PSN47859.1    UZAE01012042    VDO03235.1    CCAG010012265    GBXI01002682    JAD11610.1    GL732575    EFX75466.1    OUUW01000003    SPP77962.1    BT126753    AEE61715.1    GDRN01037016    JAI67317.1    LSMT01000071    PFX29098.1    GDIQ01196721    JAK55004.1    GDIQ01226207    JAK25518.1    GDIQ01225057    JAK26668.1    GDIQ01247861    JAK03864.1    CH479197    EDW27761.1    CH379064    EAL31667.2    GDIQ01249512    JAK02213.1    GDIP01101264    JAM02451.1    LRGB01000024    KZS21507.1    GDIQ01091058    JAL60668.1    GDIP01074114    GDIQ01058673    JAM29601.1    JAN36064.1    GDIP01174391    JAJ49011.1    GDIQ01183232    JAK68493.1    GDIP01206587    JAJ16815.1    GDIQ01105907    JAL45819.1    RCHS01001420    RMX53569.1    GDIQ01076563    JAN18174.1    GDIQ01108199    JAL43527.1    CH902625    EDV35186.1    GDIQ01076562    JAN18175.1    CH964239    EDW82440.1    CH916370    EDW00048.1    GDIQ01179228    JAK72497.1    JRES01001509    KNC22380.1    CP012528    ALC48472.1    KA644711    AFP59340.1    UFQS01000289    UFQT01000289    SSX02458.1    SSX22832.1    HACG01014277    CEK61142.1    UFQT01000316    SSX23150.1    AAGJ04103174    CH933810    EDW07111.1    GDIQ01021913    JAN72824.1    CVRI01000061    CRL04034.1    ADFV01037903    ADFV01037904    UYRU01046935    VDN09384.1    AK057071    AL138751    BC010179    BC052375    AJFE02017523    AJFE02017524    AJFE02017525   

Proteomes

UP000037510    UP000218220    UP000007151    UP000053240    UP000053268    UP000283053    + More
UP000005203    UP000002358    UP000008237    UP000215335    UP000242457    UP000053097    UP000053825    UP000279307    UP000085678    UP000007266    UP000075809    UP000078542    UP000005205    UP000078540    UP000078492    UP000078541    UP000271974    UP000095300    UP000245037    UP000046398    UP000278807    UP000092444    UP000000305    UP000268350    UP000076420    UP000225706    UP000078200    UP000008744    UP000001819    UP000076858    UP000275408    UP000007801    UP000007798    UP000001070    UP000192221    UP000037069    UP000079169    UP000092553    UP000007110    UP000091820    UP000009192    UP000095301    UP000183832    UP000075880    UP000233180    UP000001073    UP000005640    UP000240080   

PRIDE

Q96MD7   

Pfam

PF10217   DUF2039        + More
PF07004   SHIPPO-rpt

Interpro

IPR019351   DUF2039        + More
IPR010736   SHIPPO-rpt       
IPR036280   Multihaem_cyt_sf       
IPR016024   ARM-type_fold       

SUPFAM

SSF48695   SSF48695        + More
SSF48371   SSF48371       

ProteinModelPortal

A0A0L7LC64   A0A2A4JX38   A0A212FAL7   A0A2H1X1L4   A0A194R7F2   A0A194PIT4   + More
A0A3S2NP22   S4NU36   A0A088AMR1   K7J5X2   E2C5F5   A0A232EPF9   A0A2A3E3X1   V9IKI3   A0A026WRL8   A0A0L7QP13   A0A1Y1M889   A0A1Y1M306   A0A3L8DFG9   E9J6F0   A0A1S3HTJ1   A0A1S3IXS3   D7EJD6   A0A151XJ01   A0A195CPL9   A0A158NEG5   A0A195BWX6   A0A195EN03   A0A195FKD2   A0A139WIG2   A0A433TM99   A0A034WUH7   W8BXG1   R4V1M7   A0A0K8UR54   A0A1I8Q5P0   A0A2P8YUC5   A0A0R3TJU1   A0A1B0GEH9   A0A0A1XL49   E9GYL3   A0A3B0JCY4   A0A2C9LIY5   J3JU41   A0A0P4WEY0   A0A2B4SKJ7   A0A0P5JPR2   A0A1A9UZN0   A0A0P5HLR5   A0A0P5I3N4   A0A0P5HP01   B4GYA5   Q29HU0   A0A0P5FW82   A0A0P5VEZ2   A0A162SPD2   A0A0P5SMI3   A0A0P6FJV0   A0A0P5CK13   A0A0P5KJH5   A0A0P5A9J6   A0A0N8C7Z4   A0A3M6UJ23   A0A0P6DK26   A0A0P5RBP9   B3MW41   A0A0P6DLJ9   B4NC81   B4JKE5   A0A1W4VWY5   A0A0P5KUT1   A0A0L0BQP6   A0A1S3CZ51   A0A0M4EU04   T1P7V9   A0A336KFA0   A0A0B6YYD5   A0A336LZB4   W4YCB8   A0A1A9X269   B4L3I3   A0A0P6HAV6   A0A1I8MRJ1   A0A1J1IWH0   A0A182IUQ1   A0A2K6JMI2   A0A2I3FSP9   A0A3P7KXU5   Q96MD7-1   A0A2R9C0E2  

PDB

2HBM     E-value=0.0949459,     Score=79

KEGG

101745619    no KO assigned | (RefSeq) uncharacterized protein C9orf85 homolog

GO

GO:0016021  

PANTHER

PTHR22876  

Length:

187

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.22715

outside

1  -  187

 

 

Pi

139.321355

Theta

144.095732

Tajima's D

0.151867

CLR

73.413228

CSRT

0.407779611019449

Interpretation

Uncertain