Silkworm Genome Informatics Database

Gene

KWMTBOMO08978 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007740

Annotation

PREDICTED:_golgin_subfamily_A_member_4-like_[Bombyx_mori]

Location

Bomo_Chr15(+):9147763-9155315 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.446

CDS

ATGTTTAAGAAATTGAAAGATAAACTTGCTGAGGAAGTGAAATCCTCACCACAGAGAATTCAGCAATTCGCCCAAGCCGCCCAGGCTGCTGTAACATCAGCATCAAGTAGTATTTCAGATATCACAAATAGTGACCTATTTTCTATAGGAGAAAATGATAGTCAAACATTTCATTCAACTAAATCACAGCCATCAACTGTCTCTCAAAGTAATACTTTTCGAGATGTCTCGCCCATGCAAACAACAACAACTGAATCAACTGAATACAATTCTGGACAAGACTTAAGTCAAGATAATGAGCGTCAAAGGAGACTGTCTAACAGTTCTTTTGCGAGTGATGTATCCTTCAGACTACCCAGCTACGACACACCAATGATGTACCACTTACAATCCGATATTGAAGTATCTGCAAGTGAAGCTGAAGAAAGAGGCTTAAATGGTAGCACAGTGAGCCTCGATCGTGTCACTAAAGAACAACTGTATGCTGCCTATAAACGAACACAGGAAAGATACAAGAAATATAGGACACAATATGGAGACTTAGCCAGACACTACAAGCTCTTAGAGAGAGAAAATACTAAAGCAAGGAGTGTCTTAGTTGAAACTCAAGATAAAGCCTTACGGAGAATATCGGAATTGAGAGAACAATGCTCACTAGAACAAAGTGCAAAAGCACATTTAGAAAAAGCTCTTCGTGTGGAAATTGAAGAAAAAAATATGAAAATTGAGACTTTGAACACGAAAATACAATTCCTCTCCAATAGTACAAGTGCAGAAATTCCTACCAATATAGTGGATAACAATAAGATTATCATCGACAAAGATAGCAATATACCTTTAATTAATTTAGTAGAAAACGAAACAAAGGTGTCCAATGATGAATCGAAATTGCCAGTGTCATCAGATTTAACAGTGTTAAATGAAAAAATTGAAAAAATGGAATTATTGATACAGAAATATAAAGAATCATTGAAGAGCACAAAAGACAAAAATTCTCAATTAATAACCGAATTGCAAATAATGACTAACAAGCTAGAAAACAAAAGTAAAGAAGTTGAAGAAGTCTCAATACTTAATGAAAAGTACAGAGACGCCAGTGCAAAGATAAAAGAGCTGGAAAATTTAAATGAAGAACTTCAAAATAAAATAAATTCTTATGATTTCAATAAATCGAAAAAAGTTTCTGAACTAGAAACGGATTTACAAAAGGCAAACGAAGAAGTCCAACACCTTCAAAAGAAAATAGAAGTATTTTCTAAGAGAGAAGAGGAATACGCTATTTCTCTAGCAGAGAATAAATTGAGCATCCATAAAGAATTGGAAAGTAAAGAATCCGAAATCAAATCGTTAAAACATAGTTTGACCGCTAGTAAAAAAGAAATACAATCTTTAAGTATTGTCGTCACTGACTATAAAAATAGCATAGAAGCACTCGAACAAGAAAAATCTAAATTAGTTATTGAGAATAGTGAGATAGCAACCTTGAAATCTAAAGTTGAAGAATTAGAAACACATCTACAAGAACTTAATAAAAAAAATCAAATTCAAGAACAACAACACACCAAATTGAATGAAGAATATAAATGCCTGCAGCTTCAATTAAAACAAGAAATGGCTGAAAAATTAGCTATGATGGACAGAAACGCCTATTTAGAAAACCGTATTTCCCAAATATCTGAAGAGAACTCGAAGAAAAGTTCTCAAGTTAATCAATTAGAATCTAAATTACAATCTTTACAAAATGATAAAAGTAACGAAAGCATTGGAAAAGAAAAAGAAATACTGACTGAGCTAAACATTTGGAAGTCCAAGTATGATAAGCTTGAATCAGAGATGCAGGAAGAAAGAGAAGAATTAGTTAAATTACAATCGGAAATAGAAAAGCTGATTGAAAATCACGAACATATTCAAAAACAAAATGTAGAATTTCGGACAACTATCTCGGATTTACAGGCTGAAACTTCAATTTTAAATCGACAACTAAGTCATTATAATAAAATAAAAAACGATACAAATAAAATATTGGCTGATGTGGGAAAACTACGCGAATTAATAAAGTTAACTTCGAAAGATATTTTCGCGAATGTAAAAGACCATGTGGATATGATTAAAACAATTAAAATAGACATTAACAATAATATAAAAGAACTTTCCAACAACGAGCATATCAATTATGTTAATAATGAGGAACTCCGAAATGAGTGTTTGTTACTTCAAAGAAACATAAATGACATAACAGCACTGCAATCTGAAACGAATAAAACTCAAACAAAATTAAAAGAAGAAAATGTCTCTTTAACTTTAACAATACAAAAACTTACTGCAGATTTACAGGAAAAAATTGATGTCGATGAAAAATATAGGAACGCGTCCAATGATTTAAATTCATTAAGAAGTGAAAATCAAAGACTCAGTGTACTTATAAAAGATTATGAAAATACTATACAAAATTTGCGTAATTCATTAGATTTACAAAAATCGCAGTTGTCCACACTACATGAAGAGGTAATTTGCCTTCGAAAAGAAAAAGAGCTCTTTGAAGAAAACTTAAACAAATTGCAGAATATTAACAAAGATTTGGCGTCAGAACAAGACAAACATAAAAACGCAATTGCAACAAATGTAGAAATGATTAATATTTTAAGAACTAAAAATGATGACTTGCTGGAAAAAAGCGATGAATTGAACAATAAGTTAATAAACTACCAACAACTAGAAGAACATCATAAGTTATTAACACAAGAAAACTCTTTTCTTAAAAGTCAAACTGAAAATATCGCAAGCAATGTACGAGAATTAGAATTCGAAATAAATGAAGTAAGAAAATCTCACTCTGCTATTGAATCAGAAAAAGAACATTTAAGTAATGTCATCGAACAAATAGAAAACCGACGTACATTGCTAGTTTCAAAAGATACACAAACAGAATACAACGAAATAGAAACGGAACTCGACAAAGAAAAAAACTTATCTAATATAAAGATAATAAATGAACTTAGCGAGAAGTATGATGCCTTAAAAGGAGAAAATAGACGGCTTTTGTCTGACATTGAAGGACTCCAAACACATTTAACGAAAACATCAAAAGAAAACAGCTTACTCAATGACAAACTCCGTGAGCAAATTGCAACAAGTGAAACAGGGAACTACATGTCCCATGATTTGAATAATGACATTCGGTTGGCTAAAGATAAAATTGATCACTTAACAAGGGAGAATACACTTTTAAATGAAGAAAACCTGGAACTAAAAGACCAGTTACAGTCACAGGAATATTGCAAACCTACAAATGCTGATCAGTGTTTTGAACACAAAGGGGAAAATGAGCTGTCTGAAATTAAAGAAAAATATTACACATTAATACTGGCTAATAGCAAAATAGAACAGAAAAACATTGATTTGGAACAATTGAACAGATCATTGAATGTTAACATCCAAGATGTACAAGCCAAAAACGAAAAATTGAAACTTTCGAATGAAAAAATAGAGCGCAGGCTCGATGAAGCTTTAGTTAGTTTAAGACATTTGCACTCTTTAGAAGAAAATACCGAGCTAGAATATTTAAGGAATATACTCTATGAATACCTTACAGGCTCAGGAACACATTCCATTACTTTAGCGAAAGTTTTAGCTGCAGTAGTCAAATTTGATGACAAGCAAACCCAAATGGTTCTTCAAAAAGAAAAAGAAAGACAAGGTTTTCTAAGGCAACTCCGACTCACGTGA

Protein

MFKKLKDKLAEEVKSSPQRIQQFAQAAQAAVTSASSSISDITNSDLFSIGENDSQTFHSTKSQPSTVSQSNTFRDVSPMQTTTTESTEYNSGQDLSQDNERQRRLSNSSFASDVSFRLPSYDTPMMYHLQSDIEVSASEAEERGLNGSTVSLDRVTKEQLYAAYKRTQERYKKYRTQYGDLARHYKLLERENTKARSVLVETQDKALRRISELREQCSLEQSAKAHLEKALRVEIEEKNMKIETLNTKIQFLSNSTSAEIPTNIVDNNKIIIDKDSNIPLINLVENETKVSNDESKLPVSSDLTVLNEKIEKMELLIQKYKESLKSTKDKNSQLITELQIMTNKLENKSKEVEEVSILNEKYRDASAKIKELENLNEELQNKINSYDFNKSKKVSELETDLQKANEEVQHLQKKIEVFSKREEEYAISLAENKLSIHKELESKESEIKSLKHSLTASKKEIQSLSIVVTDYKNSIEALEQEKSKLVIENSEIATLKSKVEELETHLQELNKKNQIQEQQHTKLNEEYKCLQLQLKQEMAEKLAMMDRNAYLENRISQISEENSKKSSQVNQLESKLQSLQNDKSNESIGKEKEILTELNIWKSKYDKLESEMQEEREELVKLQSEIEKLIENHEHIQKQNVEFRTTISDLQAETSILNRQLSHYNKIKNDTNKILADVGKLRELIKLTSKDIFANVKDHVDMIKTIKIDINNNIKELSNNEHINYVNNEELRNECLLLQRNINDITALQSETNKTQTKLKEENVSLTLTIQKLTADLQEKIDVDEKYRNASNDLNSLRSENQRLSVLIKDYENTIQNLRNSLDLQKSQLSTLHEEVICLRKEKELFEENLNKLQNINKDLASEQDKHKNAIATNVEMINILRTKNDDLLEKSDELNNKLINYQQLEEHHKLLTQENSFLKSQTENIASNVRELEFEINEVRKSHSAIESEKEHLSNVIEQIENRRTLLVSKDTQTEYNEIETELDKEKNLSNIKIINELSEKYDALKGENRRLLSDIEGLQTHLTKTSKENSLLNDKLREQIATSETGNYMSHDLNNDIRLAKDKIDHLTRENTLLNEENLELKDQLQSQEYCKPTNADQCFEHKGENELSEIKEKYYTLILANSKIEQKNIDLEQLNRSLNVNIQDVQAKNEKLKLSNEKIERRLDEALVSLRHLHSLEENTELEYLRNILYEYLTGSGTHSITLAKVLAAVVKFDDKQTQMVLQKEKERQGFLRQLRLT

Uniprot

A0A2A4JX37 A0A2A4JXT3 A0A3G1PY94 A0A2H1WYE0 A0A3S2L3H8

EMBL

NWSH01000412 PCG76575.1 PCG76576.1 KY701524 AVV62494.1 ODYU01012016 + More
SOQ58089.1 RSAL01000187 RVE44787.1

Proteomes

UP000218220 UP000283053

Pfam

PF01465 GRIP

Interpro

IPR000237 GRIP_dom

ProteinModelPortal

A0A2A4JX37 A0A2A4JXT3 A0A3G1PY94 A0A2H1WYE0 A0A3S2L3H8

PDB

1UPT E-value=0.000205636, Score=111

KEGG

101745912 K20283 golgin subfamily A member 4 | (RefSeq) golgin subfamily A member 4-like

GO

GO:0043001 GO:0000042 GO:0005515 GO:0008270 GO:0042626 GO:0016887 GO:0008237 GO:0043565 GO:0016876 GO:0043039

Length:

1241

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19297

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.00001

outside

1 - 1241

Pi

161.808927

Theta

156.944589

Tajima's D

-0.838211

CLR

18.771628

CSRT

0.171591420428979

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics