SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08976  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007739
Annotation
hypothetical_protein_KGM_09534_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.918
 

Sequence

CDS
ATGACTTCGCAAGTAACTCCACCATCAGTATCTTGGGCTCAGCGAAACGCTCGTATCTTTTTAACATTCAATGTTGAATGTGAAAAGCCTGATATAAACATTGAACCTAAATCGATTACGTTCAAAGGAATATGCGAACCAGAAAAAAAAATGCACGAGGTTTTAATACCACTTTATGCTGAAGTTGATCCTAAAAAGAGCATGTGGGTTAACAAAGGAAGGTTAATTGAGGTACTATTGGCGAAAGAAAAGGTTGATGAGCCATACTGGCCTTCATTAACAAGTGATAAAAAGAAACACCATTGGCTTAAAGTGGATTTTAATCGCTGGCAAGATGAAGATGAAAGTGGAGACGATTTAGACAATATGAATGACATGTTTTCGGACAAAGATATGAACATTCAATTTGGTGGAGATAATGAAAAGGATGATTCGAGCTCTGGTGAAGAAGAAGATTTACCTGATATAGAATAA
Protein
MTSQVTPPSVSWAQRNARIFLTFNVECEKPDINIEPKSITFKGICEPEKKMHEVLIPLYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSSGEEEDLPDIE

Summary

EMBL
BABH01002561    NWSH01000412    PCG76571.1    GDQN01010386    GDQN01005966    JAT80668.1    + More
JAT85088.1    ODYU01012016    SOQ58093.1    JTDY01005203    KOB67256.1    KQ460615    KPJ13573.1    GAIX01006588    JAA85972.1    KQ459602    KPI93327.1    LJIG01016180    KRT81376.1    KQ971342    EFA03889.1    GEZM01016200    JAV91341.1    JTDY01002482    KOB71328.1    BABH01009253    AB206399    BAD90845.1    GALX01001898    JAB66568.1    NEVH01010475    PNF32582.1    PNF32583.1    KK853097    KDR11450.1    KC571976    AGM32475.1    GECU01029217    JAS78489.1    GEBQ01019645    GEBQ01008419    JAT20332.1    JAT31558.1    DS231980    EDS30238.1    GBYB01008566    JAG78333.1    GFDL01013224    JAV21821.1    KC261579    AGJ83338.1    GEDC01021976    JAS15322.1    AK417101    BAN20316.1    GEDC01023159    JAS14139.1    GALA01000727    JAA94125.1    GBHO01015442    GBRD01009314    GDHC01000640    JAG28162.1    JAG56507.1    JAQ17989.1    GFTR01002880    JAW13546.1    GBGD01003206    JAC85683.1    MH365787    QBB01596.1    GEMB01002688    JAS00507.1    GBHO01017645    GBRD01009313    GDHC01003311    JAG25959.1    JAG56508.1    JAQ15318.1    AAZX01016814    AAZX01019502    GANO01003099    JAB56772.1    KQ459896    KPJ19401.1    GECL01003549    JAP02575.1    GDKW01001208    JAI55387.1    ACPB03000870    GAHY01001582    JAA75928.1    JXUM01146375    KQ570161    KXJ68437.1    GDIQ01269069    JAJ82655.1    ABLF02024389    LBMM01005677    KMQ91295.1    AK401459    KQ459551    BAM18081.1    KPI99932.1    GDIP01226804    JAI96597.1    GL732657    EFX68359.1    AK340120    BAH70783.1    CH478532    EAT32823.1    LRGB01002901    KZS05566.1    NNAY01002764    OXU20617.1    GL451202    EFN79775.1    KQ983219    KYQ46535.1    GDIP01032258    JAM71457.1    AXCM01001359    ADTU01001303    KQ981855    KYN34753.1    AXCN02001729    GDIQ01006543    JAN88194.1    GDIQ01003305    JAN91432.1    GDIP01191305    JAJ32097.1    GFXV01002673    MBW14478.1    KZ288427    PBC25882.1    JR050040    AEY61161.1    GDIP01131714    JAL72000.1    JH432223    SAUD01002297    RXG70052.1    AAAB01008816    EAA05132.4    APCN01001484    KQ438551    KOX67174.1    GGFM01001496    MBW22247.1    NCKV01006911    RWS23206.1    GAMD01002633    JAA98957.1    NCKU01005988    RWS03954.1   
Pfam
PF04969   CS
Interpro
IPR007052   CS_dom        + More
IPR008978   HSP20-like_chaperone       
SUPFAM
SSF49764   SSF49764       
Gene 3D
PDB
2CG9     E-value=2.01635e-10,     Score=152

Ontologies

Topology

Length:
157
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09712
outside
1  -  157
 
 

Population Genetic Test Statistics

Pi
158.497049
Theta
169.164349
Tajima's D
-0.503167
CLR
197.854233
CSRT
0.24088795560222
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 RVSTDAGEDSADDLDESHTDDISRV 100.00 1e-09
28556443 EKVDEPYWPSLTSDK 100.00 2e-04
28556443 LIEVLLAK 100.00 3e-04
28556443 LMEGGLDADTATR 100.00 3e-04
26822097 IIEVIIAK 100.00 0.004
26280517 TSNIQIIEEQIAK 100.00 0.004
25044914 TSPVGGIIIPGYMK 100.00 0.004
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