Silkworm Genome Informatics Database

Gene

KWMTBOMO08973

Annotation

PREDICTED:_neurofilament_medium_polypeptide-like_[Bombyx_mori]

Location

Bomo_Chr15(-):9064504-9068012 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.905

CDS

ATGTCTCCCCGGGACCTGGGCGGGCCCCCGATGCGCACTCTGCGTGCCGTGGGAGGGTACCTCTTGCTCTGCGGGAGGAGAATCCCTCCGTGCGGTCGAGAAATCGGCCGCACGCTGCCCCTCGTATTCTGGGGGGGCACAAGCTGTTCCGGGAAAGAGTCCGAGAAGGACGGGGAGAAAAGGAAGAGGTCCACAAGGGACGAAAGAGAAACGGTGCAAAACGAAGACCGGAGGAGAGAAAGCAGCGTTTGCTCGGAGGACAGCATGGTGGTCAGCTCCTGCTGTTCATCACCAAAGAGAACGACGCGCAAAAGGGCAAAAGGCTCGAAGAACGCAAGCTCCGACAGCAGTACCGAATCGGAGGCGTCTAGGTCAGGATCGTTGGTGTCCAAGACCAGACCATCGAAGAGAGGCCGAGGTCGTCCTCCAACGACCGGCCAATACGTGGGATTGGCGGCGGCGAAGCAGGCATACTTAAAAGCTCAACGTGAAGAGCTGGAGCTTCGCGCTGAACAGGAGGTAGTGGAAAGCGTGCACAACCTGCGTGAGAAGAGGCGCGCAGTACATTTAATATCCGGGAACATAACAGCAGATCCCGCGACTAGGCTCCAGGAGACCGCCCAGATGGCCCTTACCATCGCGGCGAAAGCGTGCAACCCGAAGGGGACGTACATCAAAGCCCTTAAGGAGATGGCCACAACAATAAAGGAGGCCACGGAAGATCTAGCTTCCAGATCGGTCAACGAGGAAACCCTGAGGCTGCAGGCACTCAGCGAGAGACAGGAGGCGGAGATCCTGCAGCTCAGGAAGGAAGTAGAGGACGTAAGAGCGGAAATGGTGCGCCTCGCTCAGACGACAGCGCAGCGCACTCCCGCCCCAACACTGCCAAACGAAGACGTCGAGCGACACCTGCAGATAATCATGCGAGCAGTCGGGTCCATGCTGGACGCCCGACTCGAGGGTCTGGAGGCCCGTCTACTCCCAGAGCCTCGCTTGCGACCACCTTTGGCCGCTGACGCAAGAAGGAGGAGCAGAGAGAGCGAAATCGATCCAGACACTGCAGGTCTTGTGTCGGAGGCGACGCCGCCTTATGCGGCTCTGCCCCAGCTTGAGACCAACAAGAAAGTGAAGCCCAAGAAACAGAAGGGCAATAACAAGAAGACGACGCCGTCAACTCCACTCGAGCCGCCAGCTCCACCCGAGCCGCGCGCATTCCCTCCGGCCCCGCTGCCCTTACGAAACCCTGCCCCGCTCAAGCCTAAGAAGAAAGGTAGAAAGAAGAGACTTCGAACTCCGCGCTCGCAGGCCGTTATTTTGAGGCTGCACCCGGAGGCCATCGAAAAGGGGCTCTCCTACCGGGAGGTGCTCGCCGAGGCGAGGGCCAGCATCGACGCCGGAGCCTTAGGGATCCCCATCGAAAAGGTCCGGTCAGCAATAACCGGAGCCAAAATACTCATAGTGAGCGGCGAGGACCAGATCGCGAAGGCCGACTTGCTGGCCGAGAAGCTCAAGGAGGTTCTCTCTTCCAAGAGAGTAACGGTGACAAGACCGATGGTGACCGCTGCAATCCGCATAAGCGGACTTGACGATTCGCTGACGGAGGAGGAGATATGCACCGAGCTTGCGCGCATCGGCGAATGCTCCGTCGATGCAGTCAAGGCTGGCTCTATCAAGCCCGGATCCGGAGGAATGGGCCAGGTTCTCGTTCGTTGCCCGATAGCAGCGGCGAAGAAGATTCTTACAGTGACGAAGCTGCGCATCGGGTGGAGCGTTGTTCGCGTCCACCTGCTGGAGGCCCGGAGGCTACAATGCTTCCGCTGCCACGCGTTGGGCCATGTGGGTGCGCGGTGCCCGTCGTCGGTCGACCGCAGCCACGATTGCTACCGGTGCGGACAGACCGGCCACGTGGCATCCGGATGCACACTGGCACCGCGATGCGCCGTCTGCGCCTCCGCCGGGAAACCAGCGGACCACACTTCGGGGGGCAAGGCATGTGCAAGGCCCCCGAGAAAACCGAGGAGAGAGGACGTCGCTGCACCCGCGGCCGCACCCGTTGCTGCAGACCGAAGTCAACTCGGCGAGACGACGACTCCGATGGACGTCCAGCCTCCGTCGGGCACAAGGAAGACCGGGGCTTTATGA

Protein

MSPRDLGGPPMRTLRAVGGYLLLCGRRIPPCGREIGRTLPLVFWGGTSCSGKESEKDGEKRKRSTRDERETVQNEDRRRESSVCSEDSMVVSSCCSSPKRTTRKRAKGSKNASSDSSTESEASRSGSLVSKTRPSKRGRGRPPTTGQYVGLAAAKQAYLKAQREELELRAEQEVVESVHNLREKRRAVHLISGNITADPATRLQETAQMALTIAAKACNPKGTYIKALKEMATTIKEATEDLASRSVNEETLRLQALSERQEAEILQLRKEVEDVRAEMVRLAQTTAQRTPAPTLPNEDVERHLQIIMRAVGSMLDARLEGLEARLLPEPRLRPPLAADARRRSRESEIDPDTAGLVSEATPPYAALPQLETNKKVKPKKQKGNNKKTTPSTPLEPPAPPEPRAFPPAPLPLRNPAPLKPKKKGRKKRLRTPRSQAVILRLHPEAIEKGLSYREVLAEARASIDAGALGIPIEKVRSAITGAKILIVSGEDQIAKADLLAEKLKEVLSSKRVTVTRPMVTAAIRISGLDDSLTEEEICTELARIGECSVDAVKAGSIKPGSGGMGQVLVRCPIAAAKKILTVTKLRIGWSVVRVHLLEARRLQCFRCHALGHVGARCPSSVDRSHDCYRCGQTGHVASGCTLAPRCAVCASAGKPADHTSGGKACARPPRKPRREDVAAPAAAPVAADRSQLGETTTPMDVQPPSGTRKTGAL

Uniprot

NA

ProteinModelPortal

NA

KEGG

105842334 no KO assigned | (RefSeq) neurofilament medium polypeptide-like

GO

GO:0003676 GO:0008270 GO:0016021 GO:0042626 GO:0016887 GO:0008237 GO:0043565 GO:0016876 GO:0043039

Length:

713

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00750999999999999

Exp number, first 60 AAs:

0.00686

Total prob of N-in:

0.00040

outside

1 - 713

Pi

137.95229

Theta

15.23484

Tajima's D

1.059791

CLR

0.318903

CSRT

0.683165841707915

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics