Gene

KWMTBOMO08966

Pre Gene Modal

BGIBMGA007794

Annotation

PREDICTED:_potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr15(-):8924424-8935142      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.575

CDS

ATGGAACGTAAAGGACCTTACACGGAGATGAACAATACATTAACTCAGGCAGTTCTGTTTAACTCATGTCGCAGTCTTTGCAACAGAGGACAGGTACTCTCACTGGGAGCGACGGGTGGGCATAAAGGCACAACGCAGCCATCTCATCCATGCACTATCCTCCACCATTCTCCTTATAAGGCCGCTTGGGATTGGTTGATACTAATATTGGTTATCTACACGGCAATATTTACTCCCTACGTAGCTGCCTTTCAACTAAATGAACCCGATTTCGACAAGCGTTCTCGAAGCTTCGGCGAAGATCCCATTGTAGTTATAGATATGATAGTCGACGTGACATTTATAATAGACATCTTAATAAACTTTCGAACAACATATGTGAACGCTGCTGACGAAGTGGAATCCGATCCTGCGAAAATTGCCATGCACTATCTTCGTGGCTGGTTCGTCATAGACCTCGTAGCTGCTATTCCCTTCGATCTTCTGCTGTTCGGCACCGACACCGATGAAACGACAACTCTCATCGGTTTACTGAAAACAGCGCGCTTGTTGCGACTAGTTAGAGTCGCTCGAAAAATTGACAGATACTCGGAATATGGCACCGCTGTCCTTCTATTGCTCATGGCTACGTTTGTTCTCATCGCACATTGGCTGGCGTGTTTATGGTATGCTATCGGGAGTTGGGAGCGACCGCAGCTACACGCTCCTATAGGTTGGTTAGATGCACTCGCTAACGATGTGCAAGCTTCCTATGACAATTCAACCGGCCCCTCTATGAGATCTCGTTATATCACCGCTTTATATTTCACGTGCACTTCCTTGACGAGCGTCGGTTTTGGAAATGTAGCTCCTAACACAGACATGGAAAAAGGTTTCACGATATTCGTAATGCTCGTTGGCTCACTTATGTACGCGAGTATTTTTGGAAATGTTTCTGCGATTATACAAAGACTGTATTCTGGAACAGCACGATACCATACACAAATACTTAGAGTACGAGAATTTATCAGATTTCATCAGATAACCAACCCCCTAAGACAACGCCTAGAAGAATATTTCCAACACGCGTGGAGCTATACAAATGGCATCGATACATCGAGCGTCCTGAAAGGATTCCCCGAGTGCCTCCAAGCTGATATCTGCCTCCACTTGAATCGTAATTTACTTGCCAGCTGTTCAGCCTTTGAAGGCGCCAGTCCTGGATGCTTAAGAGCCCTCTCCCTAAGATTCAAGACAACTCACGCTCCACCCGGTGAAACCCTAGTTCATAGAGGAGACGTTCTGACCTCCCTATACTTTATTTCGCGAGGATCCATTGAAATACTCAAAGATGACATAGTCATGGCCATTCTCGGGAAAGATGACATTTTCGGCGAGAACCCGTGCATTCATGGAACAGTCGGTCGTAGTAACTGCCGCGTGCGCGCTCTCACGTATTGCGATTTGCATAGAGTTCATAGAGACGACCTGCTAGACGTACTGGACTTCTATCCTGAATTCCGCAACTCCTTCGTTAATAACTTGGAGATAACTTACAACATGCGTGACGAGGAGTTAGGTGGTATAGAGCCGCGACGCCGGATGCGCTACGAGAATCCTTGCGACGCGCGTCTCCTGCGCGAAGCGTACGCGCGGACAACACGCCGTCCCCACACCGAGAACTTCGCTGAAAAAATGGTACGCGCTTCAGTTTTATGTAGAATTGCTTTCGAACGCCGATGGTCAGCGCTGCTCACGGACGCCATCACTTAA

Protein

MERKGPYTEMNNTLTQAVLFNSCRSLCNRGQVLSLGATGGHKGTTQPSHPCTILHHSPYKAAWDWLILILVIYTAIFTPYVAAFQLNEPDFDKRSRSFGEDPIVVIDMIVDVTFIIDILINFRTTYVNAADEVESDPAKIAMHYLRGWFVIDLVAAIPFDLLLFGTDTDETTTLIGLLKTARLLRLVRVARKIDRYSEYGTAVLLLLMATFVLIAHWLACLWYAIGSWERPQLHAPIGWLDALANDVQASYDNSTGPSMRSRYITALYFTCTSLTSVGFGNVAPNTDMEKGFTIFVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQILRVREFIRFHQITNPLRQRLEEYFQHAWSYTNGIDTSSVLKGFPECLQADICLHLNRNLLASCSAFEGASPGCLRALSLRFKTTHAPPGETLVHRGDVLTSLYFISRGSIEILKDDIVMAILGKDDIFGENPCIHGTVGRSNCRVRALTYCDLHRVHRDDLLDVLDFYPEFRNSFVNNLEITYNMRDEELGGIEPRRRMRYENPCDARLLREAYARTTRRPHTENFAEKMVRASVLCRIAFERRWSALLTDAIT

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
Belongs to the ligand-gated ion channel (TC 1.A.9) family.

Uniprot

A0A0K0YB78   A0A2H1VXM3   A0A2A4J7U4   A0A2A4J688   A0A212FDK2   A0A3S2NGE0   + More
A0A0K0YB79   A0A194PIS4   H9JE47   A0A194RCD5   A0A0T6BGA5   A0A1Y1NE51   A0A1Y1NDV1   A0A1L8DEW9   A0A151XGX8   A0A151IMH8   A0A2U8JGI1   A0A195DUQ9   D2A5B0   A0A195ETC9   A0A067QGI0   A0A195AYI9   N6UAH6   A0A0C9QN59   A0A0C9RBX3   A0A0C9R3J2   A0A158NSX7   A0A182JTW2   E2ADF1   A0A146KJC2   A0A0A9WVE9   A0A182RB17   A0A023PMM1   A0A182WIY8   A0A0P6DWS5   A0A0P5ZUZ6   A0A0P5ZWM0   A0A0P4XWC1   A0A182V624   A0A0P6E2X5   A0A0P5L4F9   A0A0P6EC30   A0A026WZI3   A0A453Z1J7   A0A0J7NX39   A0A0P5TSS9   A0A0P5ELC4   A0A0P5UDZ1   A0A0N8A1M2   A0A0N8B3L6   A0A182IX06   Q7QJX3   A0A0P6FHR2   A0A0P5AVD2   A0A0P4YM11   A0A0P6FQF6   A0A0P5DNP5   A0A0P5TG72   A0A1J1IU73   A0A0P5ET03   A0A0P6EQ94   A0A0P6DV70   A0A0P5T6C2   A0A0P4YH50   A0A0P5ZTE1   A0A1B0FJW3   A0A0P4ZBC2   A0A0P5NDU8   A0A0P6AIH7   A0A0P6IN14   W5JKR4   A0A0N8EQK6   A0A453Z1J4   A0A0P5VVN6   A0A1D2NMC7   A0A0P5WA93   A0A0P5AEJ3   A0A0P4Y2W7   A0A0N8CXK9   A0A453YZR4   A0A0P6F9G9   A0A0P6HAE1   A0A1B0A992   A0A165A9H5   A0A0P5JYP0   A0A0P5MK54   A0A1A9Y6J2   A0A1A9UJ19   A0A0L0C9D9   A0A1B0BIA8   A0A0P6GSP9   A0A0P5MMS7   A0A182I3W2   A0A1A9WP63   A0A453YZW9   A0A154P9R5   A0A2H8TZV5   A0A182M7I3   A0A453YZZ0   A0A3L8DS60  

Pubmed

26198671    22118469    26354079    19121390    28004739    18362917    + More
19820115    24845553    23537049    21347285    20798317    26823975    25401762    24706772    24508170    12364791    23801759    20920257    23761445    27289101    26108605    30249741   

EMBL

KR081241    AKS48231.1    ODYU01005069    SOQ45585.1    NWSH01002828    PCG67472.1    + More
PCG67471.1    AGBW02009058    OWR51778.1    RSAL01000049    RVE50390.1    KR081243    AKS48233.1    KQ459602    KPI93321.1    BABH01002584    BABH01002585    KQ460615    KPJ13566.1    LJIG01000670    KRT86270.1    GEZM01005648    JAV96009.1    GEZM01005647    JAV96011.1    GFDF01009149    JAV04935.1    KQ982138    KYQ59656.1    KQ977047    KYN06092.1    MF360102    AWK67800.1    KQ980390    KYN16294.1    KQ971345    EFA05339.2    KQ981989    KYN31167.1    KK853474    KDR07360.1    KQ976711    KYM77029.1    APGK01036682    APGK01036683    APGK01036684    APGK01036685    APGK01036686    KB740941    ENN77636.1    GBYB01002087    JAG71854.1    GBYB01010627    JAG80394.1    GBYB01001381    JAG71148.1    ADTU01025304    ADTU01025305    ADTU01025306    ADTU01025307    ADTU01025308    ADTU01025309    ADTU01025310    ADTU01025311    ADTU01025312    ADTU01025313    GL438749    EFN68567.1    GDHC01021948    JAP96680.1    GBHO01032198    JAG11406.1    KJ493818    AHX25744.1    GDIQ01072928    JAN21809.1    GDIP01039434    JAM64281.1    GDIP01038333    JAM65382.1    GDIP01237068    JAI86333.1    GDIQ01083377    JAN11360.1    GDIQ01175342    JAK76383.1    GDIQ01066235    JAN28502.1    KK107054    EZA61480.1    LBMM01001072    KMQ96980.1    GDIP01125017    JAL78697.1    GDIP01146515    JAJ76887.1    GDIP01114419    GDIP01114418    JAL89295.1    GDIP01191361    JAJ32041.1    GDIQ01216131    JAK35594.1    AAAB01008807    EAA04103.4    GDIQ01057133    JAN37604.1    GDIP01193611    JAJ29791.1    GDIP01235461    JAI87940.1    GDIQ01044742    JAN49995.1    GDIP01153819    JAJ69583.1    GDIP01130374    JAL73340.1    CVRI01000059    CRL03250.1    GDIP01155571    JAJ67831.1    GDIQ01072927    JAN21810.1    GDIQ01075729    JAN19008.1    GDIP01130373    JAL73341.1    GDIP01237070    JAI86331.1    GDIP01039435    JAM64280.1    CCAG010018850    GDIP01228110    JAI95291.1    GDIQ01143956    JAL07770.1    GDIP01028892    JAM74823.1    GDIQ01029150    JAN65587.1    ADMH02001258    ETN63364.1    GDIQ01003620    JAN91117.1    GDIP01094622    JAM09093.1    LJIJ01000008    ODN06245.1    GDIP01088973    JAM14742.1    GDIP01200866    JAJ22536.1    GDIP01237069    JAI86332.1    GDIP01088975    GDIP01088974    JAM14740.1    GDIQ01052691    JAN42046.1    GDIQ01034294    JAN60443.1    LRGB01000642    KZS17336.1    GDIQ01197132    JAK54593.1    GDIQ01156897    JAK94828.1    JRES01000737    KNC28850.1    JXJN01014865    JXJN01014866    JXJN01014867    GDIQ01030551    JAN64186.1    GDIQ01154405    JAK97320.1    APCN01000225    KQ434853    KZC08649.1    GFXV01008001    MBW19806.1    AXCM01001458    QOIP01000004    RLU23241.1   

Proteomes

UP000218220    UP000007151    UP000283053    UP000053268    UP000005204    UP000053240    + More
UP000075809    UP000078542    UP000078492    UP000007266    UP000078541    UP000027135    UP000078540    UP000019118    UP000005205    UP000075881    UP000000311    UP000075900    UP000075920    UP000075903    UP000053097    UP000036403    UP000075880    UP000007062    UP000183832    UP000092444    UP000000673    UP000094527    UP000092445    UP000076858    UP000092443    UP000078200    UP000037069    UP000092460    UP000075840    UP000091820    UP000076502    UP000075883    UP000279307   

PRIDE

H9JE47   

Pfam

PF00520   Ion_trans        + More
PF00027   cNMP_binding
PF13426   PAS_9
PF16540   MKLP1_Arf_bdg
PF00225   Kinesin
PF02931   Neur_chan_LBD
PF00160   Pro_isomerase
PF02932   Neur_chan_memb
PF08016   PKD_channel
PF16200   Band_7_C
PF01145   Band_7

Interpro

IPR018490   cNMP-bd-like        + More
IPR014710   RmlC-like_jellyroll       
IPR003967   K_chnl_volt-dep_ERG       
IPR030172   KCNH6       
IPR000595   cNMP-bd_dom       
IPR003938   K_chnl_volt-dep_EAG/ELK/ERG       
IPR027359   Volt_channel_dom_sf       
IPR005821   Ion_trans_dom       
IPR000014   PAS       
IPR035965   PAS-like_dom_sf       
IPR006202   Neur_chan_lig-bd       
IPR038105   Kif23_Arf-bd_sf       
IPR032384   Kif23_Arf-bd       
IPR019821   Kinesin_motor_CS       
IPR018000   Neurotransmitter_ion_chnl_CS       
IPR036961   Kinesin_motor_dom_sf       
IPR036734   Neur_chan_lig-bd_sf       
IPR036719   Neuro-gated_channel_TM_sf       
IPR027417   P-loop_NTPase       
IPR001752   Kinesin_motor_dom       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR029000   Cyclophilin-like_dom_sf       
IPR006029   Neurotrans-gated_channel_TM       
IPR020892   Cyclophilin-type_PPIase_CS       
IPR013122   PKD1_2_channel       
IPR036013   Band_7/SPFH_dom_sf       
IPR032435   Band_7_C       
IPR001107   Band_7       

SUPFAM

SSF51206   SSF51206        + More
SSF55785   SSF55785       
SSF52540   SSF52540       
SSF90112   SSF90112       
SSF63712   SSF63712       
SSF50891   SSF50891       
SSF117892   SSF117892       

Gene 3D

1.20.120.350     2.60.120.10     2.70.170.10     3.40.50.12000     3.40.850.10     2.40.100.10    

CDD

cd00038  CAP_ED
cd00130  PAS

ProteinModelPortal

A0A0K0YB78   A0A2H1VXM3   A0A2A4J7U4   A0A2A4J688   A0A212FDK2   A0A3S2NGE0   + More
A0A0K0YB79   A0A194PIS4   H9JE47   A0A194RCD5   A0A0T6BGA5   A0A1Y1NE51   A0A1Y1NDV1   A0A1L8DEW9   A0A151XGX8   A0A151IMH8   A0A2U8JGI1   A0A195DUQ9   D2A5B0   A0A195ETC9   A0A067QGI0   A0A195AYI9   N6UAH6   A0A0C9QN59   A0A0C9RBX3   A0A0C9R3J2   A0A158NSX7   A0A182JTW2   E2ADF1   A0A146KJC2   A0A0A9WVE9   A0A182RB17   A0A023PMM1   A0A182WIY8   A0A0P6DWS5   A0A0P5ZUZ6   A0A0P5ZWM0   A0A0P4XWC1   A0A182V624   A0A0P6E2X5   A0A0P5L4F9   A0A0P6EC30   A0A026WZI3   A0A453Z1J7   A0A0J7NX39   A0A0P5TSS9   A0A0P5ELC4   A0A0P5UDZ1   A0A0N8A1M2   A0A0N8B3L6   A0A182IX06   Q7QJX3   A0A0P6FHR2   A0A0P5AVD2   A0A0P4YM11   A0A0P6FQF6   A0A0P5DNP5   A0A0P5TG72   A0A1J1IU73   A0A0P5ET03   A0A0P6EQ94   A0A0P6DV70   A0A0P5T6C2   A0A0P4YH50   A0A0P5ZTE1   A0A1B0FJW3   A0A0P4ZBC2   A0A0P5NDU8   A0A0P6AIH7   A0A0P6IN14   W5JKR4   A0A0N8EQK6   A0A453Z1J4   A0A0P5VVN6   A0A1D2NMC7   A0A0P5WA93   A0A0P5AEJ3   A0A0P4Y2W7   A0A0N8CXK9   A0A453YZR4   A0A0P6F9G9   A0A0P6HAE1   A0A1B0A992   A0A165A9H5   A0A0P5JYP0   A0A0P5MK54   A0A1A9Y6J2   A0A1A9UJ19   A0A0L0C9D9   A0A1B0BIA8   A0A0P6GSP9   A0A0P5MMS7   A0A182I3W2   A0A1A9WP63   A0A453YZW9   A0A154P9R5   A0A2H8TZV5   A0A182M7I3   A0A453YZZ0   A0A3L8DS60  

PDB

5VA2     E-value=3.69039e-172,     Score=1554

KEGG

101744132    K04905 potassium voltage-gated channel Eag-related subfamily H member 2 | (RefSeq) sei; potassium vo

GO

GO:0005249   GO:0016021   GO:0034765   GO:0005267   GO:0005244   GO:0042391   GO:0071805   GO:0005887   GO:0003777   GO:0005230   GO:0007018   GO:0008017   GO:0005524   GO:0006457   GO:0003755   GO:0006813   GO:0016020   GO:0005216   GO:0006811   GO:0008237   GO:0008270   GO:0043565   GO:0016876   GO:0043039   GO:0055085  

PANTHER

PTHR10217:SF468  

Length:

583

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

121.6613

Exp number, first 60 AAs:

0.00534

Total prob of N-in:

0.92164

inside

1  -  60

TMhelix

61  -  83

outside

84  -  102

TMhelix

103  -  122

inside

123  -  202

TMhelix

203  -  225

outside

226  -  262

TMhelix

263  -  285

inside

286  -  291

TMhelix

292  -  314

outside

315  -  583

 

 

Pi

267.914171

Theta

191.072855

Tajima's D

1.219127

CLR

0.001532

CSRT

0.72186390680466

Interpretation

Uncertain