Silkworm Genome Informatics Database

Gene

KWMTBOMO08965

Pre Gene Modal

BGIBMGA007794

Annotation

PREDICTED:_potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr15(-):8918873-8923092 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.888

CDS

ATGTTCCACGACCTATCTGTCTTCTATGCCGTGAAAAAACAACACAACAATTTGAAAAGCTATTCTAAACATGATTTTCTACCTTTCTCTATTCTGCATCCTAATCTCTTCCGAATAGGGCACGTAGACTCCCAGTGCAGCGATGATGAGACCGAATCACCCGCCAGTCGCGGAATCCTCGAGTTTTCTGCGGACAAAGCCGGTCAAGATGTGACCCCGCTCAATTTCAACTTCAGTAAACAACGTTCCACTACACTTAATTCCATAACAGGCATGCTAGCGCAACTTAAACGGAGCTTCCCAGACCTCTACCATCATAAAACACATCAGCCGCTACACAACAAATATTCTCAATCAACTCCTCAGACGTACCGAGGCCGGGCTGGTGTTAGGCGGCAGTCGTCAGTGGGTCCTTTAAATGACACTTCCCCACTGACAGGCGGAGCGGCGGCCGGCGAGGCGGCGGTCAGCACGCCTGCACACAGCGCGACATTACCAGTCTCTAGTCTCAGCACTAATCCTAGCTCGTATTATACCAACGCCTCGCCTAGCCCTCCGGCAGTCCCAGCGCCACAACATCATTCCTGCGACGATATCTTAGCGACGCCAGCGGTGCCTTCTGCAATTCGAACGCCATCTTCTCGTTCTGCACCTCATTCTGCTGTAAATCTCCACCAAACAGGTCGTCCCGCCGCACTCTCTATCTCTACTGAGAGAACACAAAATGCAGGACAGGACAGTACATCACCTCAATACCAAAATGTCGGGACAGCTGCTACAGCTGCCTCGGTGGCGACAGTTTTAACGAGATTGGAAGAACTAAGCAGGCGCGTCGCTGTACTCGAAACCGGTCTCACAGCAGACGTGCGACGTATACTACAGTTGCTACAAACCCGAGATTGTCCGCCTCATCATAACGCACAACCAGCACAGACGCGTTCCCAAGTTTTGCCAAAAACTTCGCTCTCGGTACCCCAAACAAATGAGTGGGAATGGAACTGGAACTGTGATCGCGATCGTGAACGGGGTGACCGATATGTTCGAGCCGAGCGGGCGGAGCGAACTCCGGGAGTTCAGAGATCGGCATCGGAGCCGCACGCACCGGTGCCGCCGGCACTGCCTCCGCCCCCGCACTCGCACTCGTTCTACAGATTTTAA

Protein

MFHDLSVFYAVKKQHNNLKSYSKHDFLPFSILHPNLFRIGHVDSQCSDDETESPASRGILEFSADKAGQDVTPLNFNFSKQRSTTLNSITGMLAQLKRSFPDLYHHKTHQPLHNKYSQSTPQTYRGRAGVRRQSSVGPLNDTSPLTGGAAAGEAAVSTPAHSATLPVSSLSTNPSSYYTNASPSPPAVPAPQHHSCDDILATPAVPSAIRTPSSRSAPHSAVNLHQTGRPAALSISTERTQNAGQDSTSPQYQNVGTAATAASVATVLTRLEELSRRVAVLETGLTADVRRILQLLQTRDCPPHHNAQPAQTRSQVLPKTSLSVPQTNEWEWNWNCDRDRERGDRYVRAERAERTPGVQRSASEPHAPVPPALPPPPHSHSFYRF

Uniprot

H9JE47 A0A0K0YB79 A0A0K0YB78 A0A3S2NGE0 A0A212FDK2 A0A194RCD5 + More
A0A2H1VXM3 A0A194PIS4 A0A0L7KWU7 A0A1Y1NDV1

Pubmed

19121390 26198671 22118469 26354079 26227816 28004739 + More

EMBL

BABH01002584 BABH01002585 KR081243 AKS48233.1 KR081241 AKS48231.1 + More
RSAL01000049 RVE50390.1 AGBW02009058 OWR51778.1 KQ460615 KPJ13566.1 ODYU01005069 SOQ45585.1 KQ459602 KPI93321.1 JTDY01004810 KOB67723.1 GEZM01005647 JAV96011.1

Proteomes

UP000005204 UP000283053 UP000007151 UP000053240 UP000053268 UP000037510 + More

PRIDE

H9JE47

Pfam

PF00520 Ion_trans + More
PF00027 cNMP_binding

Interpro

IPR003967   K_chnl_volt-dep_ERG        + More
IPR005821   Ion_trans_dom
IPR014710   RmlC-like_jellyroll
IPR003938   K_chnl_volt-dep_EAG/ELK/ERG
IPR027359   Volt_channel_dom_sf
IPR030172   KCNH6
IPR000595   cNMP-bd_dom
IPR018490   cNMP-bd-like

SUPFAM

SSF51206 SSF51206

Gene 3D

1.20.120.350 2.60.120.10

CDD

cd00038 CAP_ED

ProteinModelPortal

H9JE47 A0A0K0YB79 A0A0K0YB78 A0A3S2NGE0 A0A212FDK2 A0A194RCD5 + More
A0A2H1VXM3 A0A194PIS4 A0A0L7KWU7 A0A1Y1NDV1

KEGG

101744132 K04905 potassium voltage-gated channel Eag-related subfamily H member 2 | (RefSeq) sei; potassium vo

GO

GO:0016021 GO:0034765 GO:0005249 GO:0005267 GO:0005244

PANTHER

PTHR10217:SF468

Length:

385

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00096

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00282

outside

1 - 385

Pi

252.824276

Theta

203.58242

Tajima's D

0.377163

CLR

0.151669

CSRT

0.476126193690316

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics