SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08964  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007734
Annotation
PREDICTED:_bystin_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.173
 

Sequence

CDS
ATGGGTAAAGTTAAAAAGTTGAAGCCCTCACAAGTGGGAAAAAATTTAGCTCTTGCTGATCAAATTGAATCTGGAAATTCAGTCAAAATTAAAAATAGGACCAAAGATAGAAATAGGCACGATGAAGACGATGAGTTTGTAAAAGCAGATTTGTCTAAAAAAATTTTAAAAACTGCTAGAAGGCAACAAGCTGAACTAGAAGACAATGAGATTGGTCCGTCTCCAGCAAAACATGTCACTCTTGTGTCAAGCTTTAAAGATAAAGGATCAGATAGTTCAGATTCAGAGAAGGATGACTTGGAACCTGACACATACTATGATAACATTGAAATCAACGAAGCAGATGAAGAAGCACTCAAATTGTTCAAATCATCTAAAACAGAAAGAGTTAGAACTCTAGCTGATATTATAAAAGAAAAAATTACTGACAAACACACAGAACTACAGACTCAGTTCTCAGATGCAGAAACTTTAAAATTGCAGAATATTGATCCAAGAATAAAAACCATGTATGAGGGCGTAAGGGATGTACTCCAGAAATATAGATCAGGCAAATTACCGAAAGCTTTCAAAATGGTGCCACATTTGCAGAATTGGGAGCAAATTTTATACTTAACAGAGCCTACTACTTGGTCAGCAGCTGCTATGTATCAGGCAACTAGAATTTTTGCATCAAATCTTAAGGAGAAGATGGCTCAGAGGTTTTATAATTTAGTTTTACTACCACGTGTCAGAGATGACCTTGCTGAATACAAAAGGTTGAATTTCCACTTGTACCAAGCATTGAGGAAGGCCTTGTTCAAACCTGGTGCTTTTATGAAGGGAATTTTACTACCGTTATGTGAGGCTGGGGATTGTACGCTAAGAGAAGCTATAATTGTTGGATCTGTGCTGGCACGTAATTCAGTACCCGTTTTACATTCTAGTGCTGCTTTGTTAAAAATAGCTGAAATGGATTATAACGGTGCTAATTCAATTTTCCTGAGAATCCTTTTTGATAAAAAATATGCTCTTCCATATAGAGTTGTGGATGCTGTTGTTTTTCATTTTTTGAGGTTTCAATCTGAGGCTCGTGTATTACCTGTATTATGGCATCAAGCTCTATTAACGTTTGTACAGCGTTATAAGGCAGATATATCAACTGAGCAACGAGATGCACTTCTAGAGTTATTGAGAAAACAATATCATCCTACAATAACACAAGAGATTCGACGGGAGTTACAACAAGCTCAATGCAGAGATATTGAAGTAAATGAAGAAGCAACTAACATGATGTCAGTTGAATAA
Protein
MGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTARRQQAELEDNEIGPSPAKHVTLVSSFKDKGSDSSDSEKDDLEPDTYYDNIEINEADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTMYEGVRDVLQKYRSGKLPKAFKMVPHLQNWEQILYLTEPTTWSAAAMYQATRIFASNLKEKMAQRFYNLVLLPRVRDDLAEYKRLNFHLYQALRKALFKPGAFMKGILLPLCEAGDCTLREAIIVGSVLARNSVPVLHSSAALLKIAEMDYNGANSIFLRILFDKKYALPYRVVDAVVFHFLRFQSEARVLPVLWHQALLTFVQRYKADISTEQRDALLELLRKQYHPTITQEIRRELQQAQCRDIEVNEEATNMMSVE

Summary

EMBL
FJ602777    ACM24343.1    BABH01002589    NWSH01000740    PCG74482.1    ODYU01005069    + More
SOQ45584.1    KQ460615    KPJ13565.1    GDQN01003980    JAT87074.1    KQ459602    KPI93320.1    GAIX01005492    JAA87068.1    AGBW02009058    OWR51780.1    RSAL01000049    RVE50391.1    NEVH01013250    PNF29360.1    GBGD01001585    JAC87304.1    KK852751    KDR17157.1    KQ982557    KYQ55024.1    GFTR01006075    JAW10351.1    GDKW01001122    JAI55473.1    GAHY01001376    JAA76134.1    GECL01002356    JAP03768.1    KQ981281    KYN43342.1    ADTU01019058    KQ435747    KOX76494.1    GL888413    EGI61325.1    GBBI01001032    JAC17680.1    KQ979308    KYN21974.1    KQ414663    KOC65440.1    LBMM01000796    KMQ97469.1    KQ434885    KZC10066.1    KQ971343    EFA03295.1    GL445250    EFN89984.1    GL440492    EFN65824.1    GEZM01078253    GEZM01078252    JAV62821.1    GECZ01028067    JAS41702.1    NNAY01004075    OXU18407.1    AAZX01014366    KZ288322    PBC28120.1    GECU01011935    JAS95771.1    GBYB01001023    JAG70790.1    KQ977085    KYN05916.1    KK107152    QOIP01000007    EZA57153.1    RLU20694.1    KQ762520    OAD55765.1    DS235124    EEB12243.1    GBHO01006416    GBRD01013866    GDHC01014428    JAG37188.1    JAG51960.1    JAQ04201.1    NEDP02005553    OWF38862.1    GGMR01011681    MBY24300.1    GGMS01001815    MBY71018.1    ABLF02033113    GFXV01007993    MBW19798.1    AK341378    BAH71785.1    GFPF01007664    MAA18810.1    GEDV01008764    JAP79793.1    GACK01006742    JAA58292.1    GDIP01225243    GDIP01225242    JAI98158.1    GEFH01003090    JAP65491.1    GFWV01002582    MAA27312.1    GBBM01001052    JAC34366.1    JO840646    AEO32263.1    GEFM01003153    JAP72643.1    GEDC01023657    JAS13641.1    GANP01000321    JAB84147.1    LJIG01022450    KRT80530.1    GACK01001058    JAA63976.1    JH817849    EKC30098.1    ABJB010081940    ABJB010688253    DS885859    EEC15238.1    APGK01029293    KB740731    KB632226    ENN79288.1    ERL90308.1    BT128199    AEE63160.1    AXCM01000997    GDIP01225241    JAI98160.1    GFDF01000777    JAV13307.1    GDIP01058857    JAM44858.1    GDIP01158330    LRGB01002167    JAJ65072.1    KZS08857.1    GDAI01000059    JAI17544.1    AJWK01022559    CH477186    EAT48991.1    AKHW03003562    KYO34237.1    GDIP01104139    JAL99575.1    UFQS01000611    UFQT01000611    SSX05366.1    SSX25727.1    GDIP01229535    JAI93866.1    JXUM01117830    KQ566123    KXJ70378.1    AAAB01008859    EAA07612.5    APCN01000591    BC053134    AAH53134.1    GDIP01122792    JAL80922.1    AMQN01010124    KB307090    ELT99216.1    GAPW01001555    JAC12043.1    EU142260    ABV60396.1   
Pfam
PF05291   Bystin
Interpro
IPR007955   Bystin       
PDB
6G4W     E-value=1.42721e-129,     Score=1186

Ontologies

Topology

Length:
428
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01327
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00934
outside
1  -  428
 
 

Population Genetic Test Statistics

Pi
157.259355
Theta
132.214704
Tajima's D
0.08585
CLR
0.173426
CSRT
0.39718014099295
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 MTANWSSFK 100.00 2e-06
31250652 MMPHELARHALLGLLQK 100.00 3e-05
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