SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08959
Pre Gene Modal
BGIBMGA007730
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_serine/threonine-protein_kinase_mig-15_[Papilio_machaon]
Location
Bomo_Chr15(+):8832303-8844824      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.215
 

Sequence

CDS
ATGGATGTCACACAAGATGAGGAAGAAGAAATAAAGCTTGAAATCAATGTACTGAAGAAATATTCAAACCACCGTAACATTGCTACATATTATGGTGCTTTTATAAAGAAAAGTCCTCCGGGAAAAGATGACCAGCTTTGGTTGGTCATGGAGTACTGTGGTGCTGGCTCTGTAACAGACTTAGTTAAATCAACCAAAGGGCAATCACTTAAAGAAGAGTGGATTTCATACATCTGTAGAGAAATACTTAGAGGCCTAAGTTACTTGCATTCAAAAAAAGTCATTCACCGAGACATAAAAGGACAAAATGTTCTCCTGACAGACAATGCTGAAGTTAAACTAGTGGATTTTGGTGTATCAGCCCAGTTGGACCGTACTATAGGTAGAAGGAACACATTCATCGGTACACCGTATTGGATGGCGCCAGAAGTTATCGCTTGTGACGAGAACCCCGATGCTACTTACGATAATCGCTCTGACCTATGGTCTCTTGGTATCACTGCTCTTGAAATGGCAGAGAGTCAACCGCCTCTTTGCGATCTCCATCCTATGAGAGCACTTTTTCTGATTCCAAGGAATGCTCCACCTCGCTTAAAGTCAAAGAAATGGGCTAAAAAATTTCATAGCTTTATTGAGACTGTGTTGGTAAAAGATTATCATCAAAGGCCATACACTGAACAACTTTTGAAACATCCTTTTATAAGAGATCAACCAACAGAAAGACAAGTAAGAATACAGCTTAAAGATCATATAGATAGGTGTAAGAAACGAAAGCAGGACAACTCAGTTCGGGAAGACTACAGGTACTCAGGTTCAGAACCTGAAGAAGAAGAGAACGCTGTCGCGGGCGAACCTTCGTCTATTGTACACAACGCCGCTGCGCATCAGTCCAGCGACACTCTACGACGAAACTTTCAACAAATACAAGAAGGGGCCAGACCAGCTGAAGCATCTCAGCCTCAACCTCCGCCTAAACGTAACAGCAACCGCGAGGAACGAGAGGAGATTCCAGAGCCTGGGCCTCCTGCAAGGCCTTCCATTCCACAAAGACTGATCGTTGTGCCAGATCCACAGGTGCAACAGCCTAATAGATATAGGCCGCTGCCTCCAACCCCGAATTCATCTGGGTCTTCAAACAGTTCTGGTTCAAACAATGGTACGCCGCCAGCGAGTGGACCACAACCACCGCAGCGTGGCTCACATCACATTTTCAAACCCATGCCACCAGCACGGCGGCCAGAGGATTTAGATAAGCTAGCTGCACAACTCAATGAACTAGGCGTAGTGTCCGGAAACGAGCCACCAAGTAGGCCTCCACGTGCGCCTACTAATGGACAAGGGCCACCGGTTGAAAGAAATCCACCAGAACCGACTTTCGAAGATTCCGATAGCGATTCGGACGCGGAAGAAAGCGGTGGACGAGTTCGGAACGACGGCACGCTGCTCGCCAGTGACCCTCCCAAGCCGCTTCCCGAGTTGTGCTACAGGGGCGGACTGAGCGAGCCGAGCTGCGCGCCGACCCGCCCGCTGCCGCCGACGCCGGACGACGAGGACGCCCGCACCGACGCGCACGCGGACGCGCACGCAGACCGCACGCTCGTCATGAAACGGAGAGAAAATGCGGACATTGATAAACGACAGTCGGACGTTGACGAAGCGGTCTTGCTCAAAGATTGGGATTTCGCTCGATTTTTCCCCTCGAAGCCTGAATTAAAAGAAGAGAAAAAGGAACAGCCAAAAAAGAACGAACAAAATCGAGCCGAAATTCAAAGACAATCTCGAATGGATTCAGAAGATCCTTGGACCAAATACAAAGCGTTCGCGACACCTCCGTCTCGTCACAAACAATTTCTTCATAAATCAAACGAAAAGACCGCTCAGGAAAAATTAACTGACATGCTAAAGAAAAAAGAACAAGAATCAGAACAGAATTCTCCAAACCGATTCTTCAGAGGATTCAGAAGGGAAAATTCTGATCTTTTTCCACTACCCAGTACTCGTCATTCAGCTATATACTTTCCTAAACACGAAAGTCCGGTGGGTGCCAACAAACAGATGAGATCAAGTGGGATTTTTAACAATTCTCGGAAACAGTCTAAACCTATATCAGGAGAACCAATATTGACGGATTTCATAAAAATGAATGATAGCTTAAAAATGTCTAACCAAGGAGAGGTGCGACGAGGAAAGAACGCCGAAAAGAAGTCAACCAATAATCCTATCGATGCTCTTAAAACTGTGGCTGCTCTGATCAGGCAAGACAGCGAAAGTAACGGCCTGAGCCGCCAAAGCAGCGTAAATAGCGACTCGCCAGCTACCAGCATCTGCTATTCGAGCGGAACGTCCTTTGAAAAAACGGGCACACCCGATTTGATGGCCAACACAGGCGATAATGAACATACTGAAAATACACCAAATGCTACCTCGAGTATGGTGAAGCCGCGGAGAGAAAAAACCGAATCAGATATAGTTTTTCGAAGAAACTCTCAGTATAATCGGCACACTGAATATTTAGCGAGTGGGCAGGAAGCGGTACTCGCACAGGATCAGGGCCGATCAAGCGGCGGTAACGAGGGCAGCGGCGCCCGCACCAGCTCCGTACTGCCGGACCTGCTCAGTCAAGCCGGACAGCCGACAACACCGCCGCGTCTCGACAAATCAACCAGCGAGGAGTATAGGCAAGCCATAGCTGGTGGCACGCCCCTATCCCACCACCACCATCACCCGCCATCTTCCTCTGTGCAATCCACGCCTTCCAAATCTTTCGTATCGGGTGCGTCATCGCCGCATCCTTTACAACAATCTCCTTCCAATTCTTCTGTCGGATCCCAACAACAGTTCCTTCCGTTGCAACAGAAACAGCGTTCGTTCCTAACGTTTGGATTCGGCGCCGGCTCTACCGGAAGCGGAGGTACAGGCGGCTCCGGTGGGAACGCTTCCCGCCGAGAGAGCCACGTGAACGTCAACGTCACGCCCACAGGACACGACCTCTCTTCCGATACACCCGAGATACGAAAATATAAGAAGAGATTTAACTCTGAGATTCTCTGCGCCGCACTCTGGGGTGTTAATTTACTTATTGGAACCGAAAATGGCTTAATGCTTCTTGATCGTTCGGGGCAAGGGAAAGTTTACCAGTTGATCTCAAGACGCCGCTTCCAGCAGATGGAAGTGTTAGAAGGACAAAATATTCTTGTGACTGTATCTGGAAAAAAAAATCGCGTCCGGGTTTATTATCTCAGCTGGCTCAAATCGAAGATTTTACGTACTGACGGACTTAGTGATCAAGCAGAGCGAAGAAACGGTTGGATAAATGTTGGTGAGCTTCAAGGTGCTGTACATTTCCGTATCGTGAAATATGAAAGGATAAAATTTCTCGTCATTGCTCTTAAAGATTCCATCGAAATATATGCTTGGGCTCCCAAGCCATATCACAAGTTTATGGCCTTCAAAAATTTTGGTGAACTTCAACACAGACCTCTTTTGGTAGATTTAACCATTGAAGAAGGTACAAGACTGAAAGTAATTTATGGTTCTGCAGATGGCTTCCATGCTGTTGATTTGGACACTGCCACAGTATATGATATTTATATTCCAAAACATACACAGGGATCAATTATTCCACATTGCATTGTACCTCTTCCAAACTCTAACGGCGTGCAGTTACTTCTGTGTTATGACAATGAAGGCGTCTATGTTAACACTTATGGACGGGTTAGCAAAAATATAGTACTTCAGTGGGGTGAAATGCCCACATCGGTGGCCTACATTGGTACAGGACAAATCATGGGCTGGGGAAACAAAGCAATAGAGATTCGGTCCGTTGAAAGTGGACATCTTGACGGCGTTTTTATGCACAAGAAGGCACAAAGACTCAAATTTTTATGTGAACGTAATGACAAAGTATTCTTTTCTTCTGCAAAGGGGGGCTCTTCTTGTCAAATCTATTTCATGACTCTAAACAAACCCGGAATGGCCAACTGGTAG
Protein
MDVTQDEEEEIKLEINVLKKYSNHRNIATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTKGQSLKEEWISYICREILRGLSYLHSKKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNAPPRLKSKKWAKKFHSFIETVLVKDYHQRPYTEQLLKHPFIRDQPTERQVRIQLKDHIDRCKKRKQDNSVREDYRYSGSEPEEEENAVAGEPSSIVHNAAAHQSSDTLRRNFQQIQEGARPAEASQPQPPPKRNSNREEREEIPEPGPPARPSIPQRLIVVPDPQVQQPNRYRPLPPTPNSSGSSNSSGSNNGTPPASGPQPPQRGSHHIFKPMPPARRPEDLDKLAAQLNELGVVSGNEPPSRPPRAPTNGQGPPVERNPPEPTFEDSDSDSDAEESGGRVRNDGTLLASDPPKPLPELCYRGGLSEPSCAPTRPLPPTPDDEDARTDAHADAHADRTLVMKRRENADIDKRQSDVDEAVLLKDWDFARFFPSKPELKEEKKEQPKKNEQNRAEIQRQSRMDSEDPWTKYKAFATPPSRHKQFLHKSNEKTAQEKLTDMLKKKEQESEQNSPNRFFRGFRRENSDLFPLPSTRHSAIYFPKHESPVGANKQMRSSGIFNNSRKQSKPISGEPILTDFIKMNDSLKMSNQGEVRRGKNAEKKSTNNPIDALKTVAALIRQDSESNGLSRQSSVNSDSPATSICYSSGTSFEKTGTPDLMANTGDNEHTENTPNATSSMVKPRREKTESDIVFRRNSQYNRHTEYLASGQEAVLAQDQGRSSGGNEGSGARTSSVLPDLLSQAGQPTTPPRLDKSTSEEYRQAIAGGTPLSHHHHHPPSSSVQSTPSKSFVSGASSPHPLQQSPSNSSVGSQQQFLPLQQKQRSFLTFGFGAGSTGSGGTGGSGGNASRRESHVNVNVTPTGHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRSGQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNRVRVYYLSWLKSKILRTDGLSDQAERRNGWINVGELQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKNFGELQHRPLLVDLTIEEGTRLKVIYGSADGFHAVDLDTATVYDIYIPKHTQGSIIPHCIVPLPNSNGVQLLLCYDNEGVYVNTYGRVSKNIVLQWGEMPTSVAYIGTGQIMGWGNKAIEIRSVESGHLDGVFMHKKAQRLKFLCERNDKVFFSSAKGGSSCQIYFMTLNKPGMANW

Summary

Uniprot
H9JDY3   A0A2A4JR29   A0A2H1WFS9   A0A437AWY6   A0A194PKQ6   A0A194R6W6   + More
A0A212EY98   A0A0L7LRE8   A0A0E3UUF9  
Pubmed
19121390    26354079    22118469    26227816    25875245   
EMBL
BABH01002593    BABH01002594    NWSH01000740    PCG74487.1    ODYU01008385    SOQ51938.1    + More
RSAL01000315    RVE42613.1    KQ459602    KPI93314.1    KQ460615    KPJ13558.1    AGBW02011580    OWR46460.1    JTDY01000315    KOB77736.1    KM507871    AKC96184.1   
Proteomes
UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000037510   
PRIDE
H9JDY3   
Pfam
PF00069   Pkinase        + More
PF00780   CNH
Interpro
IPR001180   CNH_dom        + More
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
IPR017441   Protein_kinase_ATP_BS       
SUPFAM
SSF56112   SSF56112       
ProteinModelPortal
H9JDY3   A0A2A4JR29   A0A2H1WFS9   A0A437AWY6   A0A194PKQ6   A0A194R6W6   + More
A0A212EY98   A0A0L7LRE8   A0A0E3UUF9  

Ontologies

KEGG
101735425    K08840 TRAF2 and NCK interacting kinase [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase mig
PATHWAY
04013    MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)
GO
GO:0004672   GO:0005524   GO:0006468   GO:0006508   GO:0008237   GO:0008270   GO:0043565   GO:0016876   GO:0043039  

Topology

Length:
1328
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.2259
Exp number, first 60 AAs:
0.00106
Total prob of N-in:
0.00007
outside
1  -  1328
 
 

Population Genetic Test Statistics

Pi
279.411128
Theta
201.967812
Tajima's D
0.409337
CLR
0.676828
CSRT
0.488125593720314
Interpretation
Uncertain
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