Gene

KWMTBOMO08956  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007728

Annotation

PREDICTED:_cytosolic_non-specific_dipeptidase_[Papilio_machaon]

Location

Bomo_Chr15(+):8704828-8721484      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 4.118

CDS

ATGGCAACGGAAAAAACATTGCCTGAAATTTTTAAATACGTAGATCAGAATAAAGATTCTTATAAGCAATTATTAAAAGAAGCAGTAGCCATTCCATCCGTTTCATGTGATGTGAAATATCGTGCGGATTGCATCCGTATGGTTCACTGGATGCAAGACAAATTGAAGGAAGTCGGAGCCACTACAGAGTTAAGGGATGTTGGCTTTCAAACAATAGATGGCAAAGACGTTCAACTGCCGCCAGTTTTAGTAGGCGTATTGGGTAATGATCCAAAAAAAAATACAGTTTGTATCTATGGTCATTTGGATGTACAACCTGCATTGAAATCTGATGGATGGGAGACTGAACCTTTTGAACTAGTTGAGCGCAATGAAAAATTATATGGAAGAGGTTCTACTGATGATAAAGGTCCTGTACTTGGTTGGCTGCATACCATCAATGCCTATAAGGGCACTGGTGCTGAGCTGCCTGTCAATTTGAAGTTCATTTTCGAATGTATGGAGGAATCTGGTTCCGAAGGGCTTGACAGCTTATTAATGGACAAATTGAAACCTGAGGGATTCTTTGATAGTGTAGACTATGTATGTATATCCGATAACTATTGGTTGGGAACCACGAAGCCATGTATCACTTATGGTTTACGCGGAATCAGCTACTATTTCCTAGAAGTGGAATGTGCAAAAATGGATCTTCACAGTGGAGTCTATGGTGGCACAGTTCATGAAGCCATGTCTGATTTAATCTACTTGATGAATACACTCGTGGACAAAGATGGGAAGATATTGGTGACTGACATATATAAATCGGTAGCTCCACTCACTGAAACCGAAACCAAGCTGTACACGACTATCGACTTTGATCCGGAAGCATACAGAAAGACAATTGGAGCATACAAACTTGCGCACAATGGCGTAAAAGAACAGTTGCTGATGCATCGTTGGAGATATCCCAGCCTATCTCTACACGGGATTGAAGGTGCCGCGTTCCAGCCTGGAGCAAAAACGGTGGTTCCTGGAAAAGTGATTGGAAAATTTTCAGTCAGGCTTGTTCCGAATCAAGAGCCGGAGGAAGTTGAGAAATTAGTCTTTGATTACATCAACAAGAAGTGGGCGGAGCGCGGGTCCCCGAACAAGATGAGCATCACGGCACAGAGCGGGCGCGCCTGGACCGAGAACCCGGACCATCCGCACTACCAGGCCGCTGCCCGCGCCACTAAGCTGATATATCAGACCGATCCGGACATGTCCCGCGAAGGAGGTTCGATCCCCGTCACGATCACTCTGCAGGAGGCGAGCGGCAAGAACGTGTTGCTGTTGCCCATGGGCGCCGGAGATGACATGGCGCACTCTCAAAACGAGAAGATTAACGTTCGCAACTACATCGAAGGCATAAAACTGTTTGCCGCCTACTTGTTCGAGGTCGGTAAACTCCCCAAGTAA

Protein

MATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRDVGFQTIDGKDVQLPPVLVGVLGNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEKLYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECMEESGSEGLDSLLMDKLKPEGFFDSVDYVCISDNYWLGTTKPCITYGLRGISYYFLEVECAKMDLHSGVYGGTVHEAMSDLIYLMNTLVDKDGKILVTDIYKSVAPLTETETKLYTTIDFDPEAYRKTIGAYKLAHNGVKEQLLMHRWRYPSLSLHGIEGAAFQPGAKTVVPGKVIGKFSVRLVPNQEPEEVEKLVFDYINKKWAERGSPNKMSITAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIKLFAAYLFEVGKLPK

Cofactor

Mn(2+)

Uniprot

H9JDY1   A0A194R8H5   A0A194PIR4   A0A3S2NRC9   A0A2A4JS91   S4PF17   + More
A0A212FGT1   A0A1J1JBB1   A0A336L7Z7   N6TE70   A0A154PLI6   K7J647   U5EU96   A0A232EVH4   A0A023ESZ6   A0A1B6LJX5   A0A182G359   N6UBK2   B0XCT6   Q17KV3   A0A182FFV8   A0A2M4A5H5   A0A2M4BM01   A0A411G7I2   A0A2M4BLR0   A0A2M4A4T0   A0A310SGQ9   A0A2M3ZH36   A0A1W4XA82   T1DNF9   A0A2M3ZH25   W5JEW2   A0A2M4BLN5   A0A1Q3F977   A0A182IP61   D6WGK3   A0A182X6C9   A0A182VHH7   A0A182KRS9   A0A182I3N5   A0A1B6HGQ3   E2B4G3   A0A084VX00   A0A182WIQ5   A0A151J029   Q7QJQ9   V5I9Z3   A0A182MHM3   A0A195CUQ0   A0A182RFM3   A0A182P3L2   A0A182Q4H5   E9IN77   A0A1I8NDN8   A0A182JX13   A0A026WJS4   A0A158NQ49   A0A0J7KP64   A0A195FPB8   E2A1T0   A0A182XZ81   A0A182NHM6   A0A1L8EFI5   A0A034WDN8   J3JUI2   D3TRW2   F4WMR8   A0A1B0AM21   A0A1I8PKV4   W8C5B6   A0A195BJ63   A0A0K8R3X9   A0A1A9WI90   A0A1L8DQS9   A0A0A1WGN5   B4NZC0   A0A0L0CDT3   A0A1Y1N383   B7PIM5   A0A0J9R6I9   B4II02   A0A2A3E0C0   V9IGN0   Q8MT58   A0A1B0CCN4   B3N3J1   A0A224YUH8   A0A0P4W9P8   L7M7B2   A0A1S4MXZ6   A0A1L8DR24   A0A131YQQ5   B4MFS0   A0A088ADU9   A0A0K8WIA1   A0A0L7R996   A0A3B0J3Q3   V5G6F8   A0A2J7R470  

Pubmed

19121390    26354079    23622113    22118469    23537049    20075255    + More
28648823    24945155    26483478    17510324    20920257    23761445    18362917    19820115    20966253    20798317    24438588    12364791    14747013    17210077    21282665    25315136    24508170    30249741    21347285    25244985    25348373    22516182    20353571    21719571    24495485    25830018    17994087    17550304    26108605    28004739    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18057021    28797301    25576852    20566863    26830274   

EMBL

BABH01002596    BABH01002597    KQ460615    KPJ13555.1    KQ459602    KPI93311.1    + More
RSAL01000315    RVE42615.1    NWSH01000740    PCG74474.1    GAIX01004247    JAA88313.1    AGBW02008599    OWR52934.1    CVRI01000075    CRL08345.1    UFQS01002047    UFQT01002047    UFQT01002956    SSX13091.1    SSX32531.1    SSX34342.1    APGK01041353    KB740993    ENN76033.1    KQ434938    KZC12090.1    GANO01001582    JAB58289.1    NNAY01002011    OXU22315.1    GAPW01001181    JAC12417.1    GEBQ01021778    GEBQ01016063    GEBQ01004599    JAT18199.1    JAT23914.1    JAT35378.1    JXUM01040552    KQ561249    KXJ79229.1    ENN76032.1    DS232718    EDS45103.1    CH477221    EAT47301.1    GGFK01002680    MBW36001.1    GGFJ01004832    MBW53973.1    MH366060    QBB01869.1    GGFJ01004831    MBW53972.1    GGFK01002486    MBW35807.1    KQ769940    OAD52750.1    GGFM01007044    MBW27795.1    GAMD01002920    JAA98670.1    GGFM01007050    MBW27801.1    ADMH02001692    ETN61410.1    GGFJ01004836    MBW53977.1    GFDL01010968    JAV24077.1    KQ971321    EFA00576.1    APCN01000215    GECU01033819    JAS73887.1    GL445556    EFN89424.1    ATLV01017810    KE525192    KFB42494.1    KQ980658    KYN14772.1    AAAB01008807    EAA03960.4    GALX01002085    JAB66381.1    AXCM01000215    KQ977279    KYN04247.1    AXCN02000593    GL764290    EFZ17970.1    KK107167    QOIP01000010    EZA56255.1    RLU17744.1    ADTU01022963    LBMM01004716    KMQ92148.1    KQ981382    KYN42157.1    GL435798    EFN72602.1    GFDG01001312    JAV17487.1    GAKP01006500    JAC52452.1    BT126896    AEE61858.1    EZ424164    ADD20440.1    GL888218    EGI64545.1    JXJN01000314    GAMC01004970    GAMC01004969    JAC01587.1    KQ976464    KYM84409.1    GADI01007948    JAA65860.1    GFDF01005258    JAV08826.1    GBXI01016108    JAC98183.1    CM000157    EDW89833.1    JRES01000644    KNC29654.1    GEZM01013821    JAV92312.1    ABJB010679286    DS720013    EEC06447.1    CM002911    KMY91641.1    CH480841    EDW49528.1    KZ288497    PBC25178.1    JR042559    AEY59636.1    AE013599    AY118368    AAF57318.2    AAM48397.1    AJWK01006927    AJWK01006928    CH954177    EDV59873.1    EDV59874.1    GFPF01007105    MAA18251.1    GDRN01070213    JAI63918.1    GACK01004863    JAA60171.1    AAZO01006524    GFDF01005257    JAV08827.1    GEDV01007747    JAP80810.1    CH940667    EDW57241.2    GDHF01001436    JAI50878.1    KQ414627    KOC67450.1    OUUW01000001    SPP75955.1    GALX01002801    JAB65665.1    NEVH01007815    PNF35628.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000218220    UP000007151    + More
UP000183832    UP000019118    UP000076502    UP000002358    UP000215335    UP000069940    UP000249989    UP000002320    UP000008820    UP000069272    UP000192223    UP000000673    UP000075880    UP000007266    UP000076407    UP000075903    UP000075882    UP000075840    UP000008237    UP000030765    UP000075920    UP000078492    UP000007062    UP000075883    UP000078542    UP000075900    UP000075885    UP000075886    UP000095301    UP000075881    UP000053097    UP000279307    UP000005205    UP000036403    UP000078541    UP000000311    UP000076408    UP000075884    UP000007755    UP000092460    UP000095300    UP000078540    UP000091820    UP000002282    UP000037069    UP000001555    UP000001292    UP000242457    UP000000803    UP000092461    UP000008711    UP000008792    UP000005203    UP000053825    UP000268350    UP000235965   

PRIDE

H9JDY1    B7PIM5    Q8MT58    A0A088ADU9   

Pfam

PF07687   M20_dimer        + More
PF01546   Peptidase_M20
PF12057   BAG6
PF00240   ubiquitin
PF00620   RhoGAP
PF03417   AAT
PF00226   DnaJ

Interpro

IPR017153   CNDP/DUG1        + More
IPR001261   ArgE/DapE_CS       
IPR011650   Peptidase_M20_dimer       
IPR002933   Peptidase_M20       
IPR036397   RNaseH_sf       
IPR008936   Rho_GTPase_activation_prot       
IPR000198   RhoGAP_dom       
IPR000626   Ubiquitin_dom       
IPR021925   BAG6       
IPR029071   Ubiquitin-like_domsf       
IPR005079   Peptidase_C45       
IPR018253   DnaJ_domain_CS       
IPR036869   J_dom_sf       
IPR001623   DnaJ_domain       
IPR017149   GSH_degradosome_Dug2       

SUPFAM

SSF54236   SSF54236        + More
SSF48350   SSF48350       
SSF46565   SSF46565       

Gene 3D

3.30.420.10     1.10.287.110    

CDD

cd05676  M20_dipept_like_CNDP
cd06257  DnaJ

ProteinModelPortal

H9JDY1   A0A194R8H5   A0A194PIR4   A0A3S2NRC9   A0A2A4JS91   S4PF17   + More
A0A212FGT1   A0A1J1JBB1   A0A336L7Z7   N6TE70   A0A154PLI6   K7J647   U5EU96   A0A232EVH4   A0A023ESZ6   A0A1B6LJX5   A0A182G359   N6UBK2   B0XCT6   Q17KV3   A0A182FFV8   A0A2M4A5H5   A0A2M4BM01   A0A411G7I2   A0A2M4BLR0   A0A2M4A4T0   A0A310SGQ9   A0A2M3ZH36   A0A1W4XA82   T1DNF9   A0A2M3ZH25   W5JEW2   A0A2M4BLN5   A0A1Q3F977   A0A182IP61   D6WGK3   A0A182X6C9   A0A182VHH7   A0A182KRS9   A0A182I3N5   A0A1B6HGQ3   E2B4G3   A0A084VX00   A0A182WIQ5   A0A151J029   Q7QJQ9   V5I9Z3   A0A182MHM3   A0A195CUQ0   A0A182RFM3   A0A182P3L2   A0A182Q4H5   E9IN77   A0A1I8NDN8   A0A182JX13   A0A026WJS4   A0A158NQ49   A0A0J7KP64   A0A195FPB8   E2A1T0   A0A182XZ81   A0A182NHM6   A0A1L8EFI5   A0A034WDN8   J3JUI2   D3TRW2   F4WMR8   A0A1B0AM21   A0A1I8PKV4   W8C5B6   A0A195BJ63   A0A0K8R3X9   A0A1A9WI90   A0A1L8DQS9   A0A0A1WGN5   B4NZC0   A0A0L0CDT3   A0A1Y1N383   B7PIM5   A0A0J9R6I9   B4II02   A0A2A3E0C0   V9IGN0   Q8MT58   A0A1B0CCN4   B3N3J1   A0A224YUH8   A0A0P4W9P8   L7M7B2   A0A1S4MXZ6   A0A1L8DR24   A0A131YQQ5   B4MFS0   A0A088ADU9   A0A0K8WIA1   A0A0L7R996   A0A3B0J3Q3   V5G6F8   A0A2J7R470  

PDB

2ZOG     E-value=6.83284e-158,     Score=1430

KEGG

101736010    K08660 cytosolic nonspecific dipeptidase [EC:3.4.13.18] | (RefSeq) cytosolic non-specific dipeptidas

PATHWAY

00330    Arginine and proline metabolism - Bombyx mori (domestic silkworm)
00340    Histidine metabolism - Bombyx mori (domestic silkworm)
00410    beta-Alanine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0008237   GO:0016805   GO:0046872   GO:0004180   GO:0007165   GO:0016021   GO:0006751   GO:0009014   GO:0005576   GO:0008152   GO:0016787   GO:0006508   GO:0008270   GO:0043565   GO:0016876   GO:0043039  

Length:

479

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00355

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00245

outside

1  -  479

 

 

Pi

275.374759

Theta

172.181209

Tajima's D

1.580979

CLR

0.61927

CSRT

0.810259487025649

Interpretation

Uncertain