SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08953  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007800
Annotation
putative_seven_in_absentia_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.925
 

Sequence

CDS
ATGGGCATATTTTTCTTAACCATTGAAATATTTTCAGATAATATTTTGTATGCTTGGTTGACGATGGCTGCATCACCTTGGGTAGCAAATGGTTTTAGTTACACAGTTACCATATCTGGCAATGACCGGGAAGCTATATTTATTGACAATGTGTGGTCGGTCAGATCATGTGAAGGATCATTAAAAAAGCGTGGGCATTGTTTGCTTGTGAGCGGGTCCGACGCACGTGCATTAACTGCGCCAGATGTCATAAATTGCAAGTTGTCCGTGCGATGTTCACCGCCCAATCAGATCGCGGAGCAGACACAGCCTCGCTCCGTGCTACGGGTGGCCAATCGCAGCACTAGAGACTCTGTGCATTCCCACACCGCTCATGATTTGGAGCCTTTCCTCCAAGACCTACAGAACGACGTCGTGAGACTGTCTCGTGCTTTTGCTACGCTCGGTCGCGATGCTAATGCTTTAGTGCGCTCTACGGCTGACCCGCAACCTAGACCTCAAATCCGTTCAAACCTACCCGCCGATGAACTTGCACCTACGGCTCCAGAAGAAGCATCTACTTTACAAAATGACGGGCCCGACACCACCGTACGCGTACTATCCCGTAATGCGCGAAGACGCATGCGCCAAAGGCTCAGAGCAGCTTTAGATGAACCACAACTTCAATCCGAATCTACTTTGTTGAATAACAGATCTGGTCCTGCTCAAGTACAATTTATTCCTGTACCTAATAATCACGTCGCACACAGGACAGGTTTCGCTGTAGTGCAATCGCCTAATGTAACTCCGAATGTTCCTCCCCCAATAAGTGGACCCTCCAACGGCCAACCCCGCGAGAATAATGCTAGTTCTCGAGGTAGCAATAAAAAGAAACGTAGGTAA
Protein
MGIFFLTIEIFSDNILYAWLTMAASPWVANGFSYTVTISGNDREAIFIDNVWSVRSCEGSLKKRGHCLLVSGSDARALTAPDVINCKLSVRCSPPNQIAEQTQPRSVLRVANRSTRDSVHSHTAHDLEPFLQDLQNDVVRLSRAFATLGRDANALVRSTADPQPRPQIRSNLPADELAPTAPEEASTLQNDGPDTTVRVLSRNARRRMRQRLRAALDEPQLQSESTLLNNRSGPAQVQFIPVPNNHVAHRTGFAVVQSPNVTPNVPPPISGPSNGQPRENNASSRGSNKKKRR

Summary

Uniprot
Interpro
IPR001841   Znf_RING        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR004162   SINA-like       
Gene 3D
ProteinModelPortal

Ontologies

Topology

Length:
293
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
10.64626
Exp number, first 60 AAs:
10.64626
Total prob of N-in:
0.02768
POSSIBLE N-term signal
sequence
outside
1  -  293
 
 

Population Genetic Test Statistics

Pi
290.089019
Theta
206.758687
Tajima's D
1.268773
CLR
0.028667
CSRT
0.726263686815659
Interpretation
Uncertain
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