SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08952
Annotation
PREDICTED:_uncharacterized_protein_LOC101744707_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.753
 

Sequence

CDS
ATGAGTAGAATACAGGTCGATCCAAAGTTGTTTGTTACATGTCGACTTTGTTTGGATGATACTGGCCAGTATCAAATTGTTCCAACAGTTCAAGAACAAATTAAATTTTGTTTTGATATTCTCGTTGAACCATTTGATGGCTTACCTCAGTTAATATGCCAGACATGTGAGCAACGACTTTCGGAATACTACAAGATAAAGAAATCCTATGTACAAAAACAGACAGATCTTAAATCAAAATTAGGATCTAAGGATTTAGGATTAATCCAATCACAACAGAATGATGTTACCTCCAAGGTCAATAAGAAGTTCAAGAAAATATTTGAAAAACATTGTACTGTGCAACTAACAAAACTAGATAATAGCCCAAATCCAACTGGAATACTGAATTCTGTAATATTAAGTGATGGTAAAATTATTGAAGGTAAACATCCAAAGTATTATGTATTTTTTTCTAATAGAGAAATAAATATCAAAGCAAAGGAGCTCATTGATGAGCAAGAATTGAAGGATTCAAATATTAAGCTAGAAGAAGAAAATTGCCATTTGTCAAACTTTTCATACCATACAGATGACACAGTTTTTGCAGATGCTAATGAAAACTTTAATTACATTGAAGAGTGCAGTGATCAAGAAATAAAGCAAGAAGAATGTATAAAAATTGATGATTCGTCTAATGATTCTAATGATAGTAATATGATTGTAAGGAGAAATTCGAGATTAAACAATTTGAACTCTAAGGATGACATTCATAAAACAATTCAAAATATAGTATCTATGTGCCAGAATACACATAAAAATCGAATGACACCATCTGCAAGTTCAGACTGTAAAAGTTTCAATAATACTGAATCTCAACTAAAACGTAAAGTCCTGAATATAGGTAGGAAGACTGTTAATTCGCATGGTTTTAAATGTACTGGGTTACTGAGATATCTGGAGTCGAAAAACCTTGAAATTCTTTGGCTTCAGAGATGTTATGCTGATTCTGAAACTGGTTCAAATATGATACACATTAATACTAAGTTAAAATATGAAAAATTAGATTATAATGCAGGCTGGATCCCATTCTTTCAAGCTCAACCAGGGAATCAGTTAGTTCCATGTGTGTCAACTGATACACTACTGCAAACTGATGAAGACGAAAGTGTTGTGTCTAATTTAACAAATGCAGAAAATACAAAGTTATTAAATCCTAATCCAGTAGCCAATCCAAAACAATTTCCAAAAAAGAATAATTTACTTACAGAAAATGAGACAGATACTAAACATTCTAGAAAGAAAAGTAAAAATATGTCTAAAGGTAACAGATCTAAGAAAGAAGCGTCACTTATGGTTGAAGTGCCAAAATTTGAGGAAGAGAATATTCTAATGCCAGTCATAACATCAACGACATCTTTAGCTCCCAAATATGATAAGAATAATACACCAGTTAATAAATCAGAACCTCAGCTGTCTACTGATTCCTCAATTCCTGCTAAAAGTGGCTTTTTACCTCGAATTAAAGTAAAGCCAGATAGTGAACTGATGTCTGAGAAAATTTTAAGTTTTGCTTATCATATTTTCGTTAGTCATATGCCCGAAATTGAAATGTATTTAGAATTTGAAGACCATTAG
Protein
MSRIQVDPKLFVTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCEQRLSEYYKIKKSYVQKQTDLKSKLGSKDLGLIQSQQNDVTSKVNKKFKKIFEKHCTVQLTKLDNSPNPTGILNSVILSDGKIIEGKHPKYYVFFSNREINIKAKELIDEQELKDSNIKLEEENCHLSNFSYHTDDTVFADANENFNYIEECSDQEIKQEECIKIDDSSNDSNDSNMIVRRNSRLNNLNSKDDIHKTIQNIVSMCQNTHKNRMTPSASSDCKSFNNTESQLKRKVLNIGRKTVNSHGFKCTGLLRYLESKNLEILWLQRCYADSETGSNMIHINTKLKYEKLDYNAGWIPFFQAQPGNQLVPCVSTDTLLQTDEDESVVSNLTNAENTKLLNPNPVANPKQFPKKNNLLTENETDTKHSRKKSKNMSKGNRSKKEASLMVEVPKFEEENILMPVITSTTSLAPKYDKNNTPVNKSEPQLSTDSSIPAKSGFLPRIKVKPDSELMSEKILSFAYHIFVSHMPEIEMYLEFEDH

Summary

Pfam
PF07776   zf-AD
Interpro
IPR013087   Znf_C2H2_type        + More
IPR012934   Znf_AD       

Ontologies

Topology

Length:
538
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00098
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00152
outside
1  -  538
 
 

Population Genetic Test Statistics

Pi
207.455125
Theta
196.283955
Tajima's D
0.446223
CLR
0.494353
CSRT
0.498675066246688
Interpretation
Uncertain
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